| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is ycjT [H]
Identifier: 209397081
GI number: 209397081
Start: 1852713
End: 1854980
Strand: Direct
Name: ycjT [H]
Synonym: ECH74115_1961
Alternate gene names: 209397081
Gene position: 1852713-1854980 (Clockwise)
Preceding gene: 209397813
Following gene: 209400484
Centisome position: 33.25
GC content: 54.1
Gene sequence:
>2268_bases ATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGGCGCAGGG GAACGGCTATCTTGGGCTTCGCGCCAGCCATGAAGAAGATTACACGCGCCAGACGCGAGGGATGTATCTGGCGGGGCTGT ATCATCGGGCGGGAAAAGGTGAAATCAACGAACTGGTGAACCTGCCTGATATCTTGGGGATGGAGATTGCCATAAATGGT GAGGTTTTCTCGTTATCCCACGAAGCCTGGCAGCGTGAGCTTGACTTTGCCAGTGGCGAATTACGCCGCAACGTTGTCTG GCGTACCAGCAACGGCGCAGGTTACACCATCGCCAGCCGTCGCTTTGTTTCGGCAGACCAACTGCCGCTCATTGCGCTGG AAATCACTATTACGCCACTGGACGCCGACGCGTCAGTGCTGATTTCAACAGGTATCGACGCCACGCAAACCAACCACGGT CGCCAACATCTCGACGAAACCCAGGTGCGGGTGTTTGGTCAGCATCTGATGCAGGGGATCTACACCACCCAGGATGGACG CAGTGATGTGGCCATCAGCTGTTGCTGTAAGGTGAGCGGTGATGTGCAGCAATGCTATACCGCCAAAGAGCGCCGTTTGC TGCAACATACCAGTGCGCAGCTTCATGCAGGCGAGACAGTGACGTTGCAAAAACTGGTGTGGATCGACTGGCGGGATGAC AGGCAAGCCGTTTTAGACGAGTGGGGCAGCGCGTCGCTTCGCCAGCTTGAAATATGCGCGCAGCAGAGTTACGACCAACT TCTTGCAGCATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGCGGCGATGCGCACGATC AGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCGGCTCACGACGAGCGCAGCAGTATTGCGGCAAAA GGCTTAACCGGCGAAGGCTACAAAGGCCACGTTTTCTGGGATACAGAAGTATTTTTGCTGCCGTTCCATCTGTTTAGCGA TCCGACGGTTGCCCGAAGTTTACTGCGTTATCGCTGGCACAACTTGCCAGGCGCGCAGGAGAAAGCACGGCGCAGCGGCT GGCAGGGCGCGCTATTTCCGTGGGAAAGCGCGCGCAGCGGCGAAGAAGAGACGCCAGAATTTGCCGCCATTAACATTCGT ACCGGGCTGCGGCAAAAAGTGGCCTCGGCGCAGGCGGAACATCATCTGGTGGCCGATATCGCCTGGGCGGTTATTCAATA CTGGCAGACCACGGGGGATGAAAGTTTCATTGCTCATGAAGGCATGGCGCTACTTCTGGAAACTGCAAAGTTCTGGATTA GCCGCGCGGTGAGGGTTAACGACCGTCTGGAAATTCATGATGTTATTGGGCCAGACGAATATACCGAACATGTCAATAAT AACGCCTTCACCAGCTATATGGCCCGCTACAACGTTCAACAGGCGCTGAATATTGCCCGCCAGTTCGGCTGTAGCGACGA TGCGTTTATCCATCGCGCCGAAATGTTCCTCAAAGAGCTATGGATGCCAGAAACGCAGCCCGATGGCGTTTTGCCGCAGG ATGATTCGTTTATGGCTAAGCCGGCGATTAATCTGGCTAAATACAAAGCGGCGGCGGGGAAGCAAACCATTCTGCTGGAT TATTCACGCGCAGAAGTGAACGAGATGCAGATCCTCAAACAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCA GTTCTCAGCGGTATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCGCACTATTCACGACTCGTCATTAAGTAAAGCAA TCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGCGCGAGGGGACTGAAATCGATCTT GGTGCTGATCCGCATAGTTGTGATGATGGTATCCACGCTGCCGCAACTGGCGCTATCTGGCTGGGGGCGATTCAGGGTTT TGCCGGGGTGAGCGTGCGTGACGGTGAATTACATCTCAATCCGGCGTTACCGGAGCAGTGGCAACAGTTGTCTTTCCCTC TGTTCTGGCAGGGCTGCGAATTACAGGTCACGCTCGACGCGCAGCGTATTGCGATTCGAACTTCTGCGCCCGTTTCACTG CGTTTGAACGGGCAGCTTATATCCGTGGCTGAAGAATCTGTTTTCTGTTTGGGTGATTTTATTTTGCCCTTCAATGGGAC CGCTACCACGCATCAGGAGGATGAATGA
Upstream 100 bases:
>100_bases GCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTATATCAATCCGCAGAA ACAGGGACGCGTGTGGAATT
Downstream 100 bases:
>100_bases AACTGCAAGGGGTAATTTTCGATCTGGATGGTGTAATCACCGATACCGCGCATCTGCATTTCCAGGCGTGGCAGCAGATT GCCGCTGAAATTGGCATCAG
Product: glycosyl hydrolase, family 65
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 755; Mature: 754
Protein sequence:
>755_residues MTRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKGEINELVNLPDILGMEIAING EVFSLSHEAWQRELDFASGELRRNVVWRTSNGAGYTIASRRFVSADQLPLIALEITITPLDADASVLISTGIDATQTNHG RQHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCKVSGDVQQCYTAKERRLLQHTSAQLHAGETVTLQKLVWIDWRDD RQAVLDEWGSASLRQLEICAQQSYDQLLAASTENWRQWWQKRRITVNGGDAHDQQALDYALYHLRIMTPAHDERSSIAAK GLTGEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRSGWQGALFPWESARSGEEETPEFAAINIR TGLRQKVASAQAEHHLVADIAWAVIQYWQTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNN NAFTSYMARYNVQQALNIARQFGCSDDAFIHRAEMFLKELWMPETQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLD YSRAEVNEMQILKQADVVMLNYMLPEQFSAVSCLANLQFYEPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDL GADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSL RLNGQLISVAEESVFCLGDFILPFNGTATTHQEDE
Sequences:
>Translated_755_residues MTRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKGEINELVNLPDILGMEIAING EVFSLSHEAWQRELDFASGELRRNVVWRTSNGAGYTIASRRFVSADQLPLIALEITITPLDADASVLISTGIDATQTNHG RQHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCKVSGDVQQCYTAKERRLLQHTSAQLHAGETVTLQKLVWIDWRDD RQAVLDEWGSASLRQLEICAQQSYDQLLAASTENWRQWWQKRRITVNGGDAHDQQALDYALYHLRIMTPAHDERSSIAAK GLTGEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRSGWQGALFPWESARSGEEETPEFAAINIR TGLRQKVASAQAEHHLVADIAWAVIQYWQTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNN NAFTSYMARYNVQQALNIARQFGCSDDAFIHRAEMFLKELWMPETQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLD YSRAEVNEMQILKQADVVMLNYMLPEQFSAVSCLANLQFYEPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDL GADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSL RLNGQLISVAEESVFCLGDFILPFNGTATTHQEDE >Mature_754_residues TRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKGEINELVNLPDILGMEIAINGE VFSLSHEAWQRELDFASGELRRNVVWRTSNGAGYTIASRRFVSADQLPLIALEITITPLDADASVLISTGIDATQTNHGR QHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCKVSGDVQQCYTAKERRLLQHTSAQLHAGETVTLQKLVWIDWRDDR QAVLDEWGSASLRQLEICAQQSYDQLLAASTENWRQWWQKRRITVNGGDAHDQQALDYALYHLRIMTPAHDERSSIAAKG LTGEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRSGWQGALFPWESARSGEEETPEFAAINIRT GLRQKVASAQAEHHLVADIAWAVIQYWQTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNNN AFTSYMARYNVQQALNIARQFGCSDDAFIHRAEMFLKELWMPETQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLDY SRAEVNEMQILKQADVVMLNYMLPEQFSAVSCLANLQFYEPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDLG ADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSLR LNGQLISVAEESVFCLGDFILPFNGTATTHQEDE
Specific function: Unknown
COG id: COG1554
COG function: function code G; Trehalose and maltose hydrolases (possible phosphorylases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 65 family [H]
Homologues:
Organism=Homo sapiens, GI187829418, Length=354, Percent_Identity=28.2485875706215, Blast_Score=108, Evalue=3e-23, Organism=Escherichia coli, GI1787575, Length=755, Percent_Identity=98.1456953642384, Blast_Score=1550, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325283, Length=396, Percent_Identity=22.2222222222222, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI24583760, Length=393, Percent_Identity=26.4631043256997, Blast_Score=105, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR011013 - InterPro: IPR005194 - InterPro: IPR005195 - InterPro: IPR005196 - InterPro: IPR017045 [H]
Pfam domain/function: PF03633 Glyco_hydro_65C; PF03632 Glyco_hydro_65m; PF03636 Glyco_hydro_65N [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 84802; Mature: 84671
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKG CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCEEEEEHHHCCCCC EINELVNLPDILGMEIAINGEVFSLSHEAWQRELDFASGELRRNVVWRTSNGAGYTIASR CHHHHCCCCHHCCEEEEECCEEEEECHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECC RFVSADQLPLIALEITITPLDADASVLISTGIDATQTNHGRQHLDETQVRVFGQHLMQGI EEECCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YTTQDGRSDVAISCCCKVSGDVQQCYTAKERRLLQHTSAQLHAGETVTLQKLVWIDWRDD EECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCC RQAVLDEWGSASLRQLEICAQQSYDQLLAASTENWRQWWQKRRITVNGGDAHDQQALDYA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCCHHHHHHHH LYHLRIMTPAHDERSSIAAKGLTGEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWH HHEEEEECCCCCCCHHHHCCCCCCCCEEEEEEECCEEEEEEEHHCCCCHHHHHHHHHHHC NLPGAQEKARRSGWQGALFPWESARSGEEETPEFAAINIRTGLRQKVASAQAEHHLVADI CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH AWAVIQYWQTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNN HHHHHHHHHCCCCCCEEHHCCHHHHHHHHHHHHHHHHEECCCEEEEECCCCHHHHHHCCC NAFTSYMARYNVQQALNIARQFGCSDDAFIHRAEMFLKELWMPETQPDGVLPQDDSFMAK CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PAINLAKYKAAAGKQTILLDYSRAEVNEMQILKQADVVMLNYMLPEQFSAVSCLANLQFY CCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCEEC EPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDLGADPHSCDDGIHAAATGAIW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHH LGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSL HHHHHCCCCCEEECCEEEECCCCCHHHHHCCCCEEECCCEEEEEECCEEEEEEECCCEEE RLNGQLISVAEESVFCLGDFILPFNGTATTHQEDE EECCEEEEEHHCCEEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure TRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKG CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCEEEEEHHHCCCCC EINELVNLPDILGMEIAINGEVFSLSHEAWQRELDFASGELRRNVVWRTSNGAGYTIASR CHHHHCCCCHHCCEEEEECCEEEEECHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECC RFVSADQLPLIALEITITPLDADASVLISTGIDATQTNHGRQHLDETQVRVFGQHLMQGI EEECCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YTTQDGRSDVAISCCCKVSGDVQQCYTAKERRLLQHTSAQLHAGETVTLQKLVWIDWRDD EECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCC RQAVLDEWGSASLRQLEICAQQSYDQLLAASTENWRQWWQKRRITVNGGDAHDQQALDYA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCCHHHHHHHH LYHLRIMTPAHDERSSIAAKGLTGEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWH HHEEEEECCCCCCCHHHHCCCCCCCCEEEEEEECCEEEEEEEHHCCCCHHHHHHHHHHHC NLPGAQEKARRSGWQGALFPWESARSGEEETPEFAAINIRTGLRQKVASAQAEHHLVADI CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH AWAVIQYWQTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNN HHHHHHHHHCCCCCCEEHHCCHHHHHHHHHHHHHHHHEECCCEEEEECCCCHHHHHHCCC NAFTSYMARYNVQQALNIARQFGCSDDAFIHRAEMFLKELWMPETQPDGVLPQDDSFMAK CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PAINLAKYKAAAGKQTILLDYSRAEVNEMQILKQADVVMLNYMLPEQFSAVSCLANLQFY CCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCEEC EPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDLGADPHSCDDGIHAAATGAIW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHH LGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSL HHHHHCCCCCEEECCEEEECCCCCHHHHHCCCCEEECCCEEEEEECCEEEEEEECCCEEE RLNGQLISVAEESVFCLGDFILPFNGTATTHQEDE EECCEEEEEHHCCEEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]