Click here to switch to the map view.

The map label for this gene is ynbC [H]

Identifier: 209397036

GI number: 209397036

Start: 1909561

End: 1911318

Strand: Direct

Name: ynbC [H]

Synonym: ECH74115_2013

Alternate gene names: 209397036

Gene position: 1909561-1911318 (Clockwise)

Preceding gene: 209396975

Following gene: 209398896

Centisome position: 34.27

GC content: 51.37

Gene sequence:

>1758_bases
ATGGAAAATTCACGCATCCCTGGGGAACATTTTTTTACCACCAGTGATAATACAGCGTTGTTTTATCGGCACTGGCCCGC
TTTACAGCCAGGGGCGAAAAAGGTCATCGTCTTATTTCATCGCGGTCATGAACATTCTGGTCGTCTACAACATATCGTTG
ATGAACTGGCGATGCCAGATACTGCTTTTTATGCATGGGATGCCCGAGGGCATGGACAAACTTCGGGGCCCCGTGGTTAT
AGCCCATCTCTTGCGCGTTCAGTGCGGGATGTCGATGAGTTTGTCCGTTTTGCTGCCAGCGACAGCCAGGTCGGGCTGGA
AGAGGTGGTAGTGATCGCGCAGAGCGTCGGCGCAGTGCTGGTTGCCACATGGGTTCATGATTATGCGCCTGCAATTCGCG
GGCTGGTGCTGGCTTCTCCGGCCTTTAAGGTTAAATTGTATGTGCCGCTGGCACGTCCTGCGCTGGCGTTATGGCATCGT
CTGCGTGGTCTGTTTTTTATTAATTCCTATGTGAAAGGACGCTATTTGACCCACGATCGGCAACGGGTGGCGAGTTTCAA
TAATGATCCGCTGATCACACGGGCGATTGCCGTTAATATCTTGCTCGATCTTTATAAAACGTCTGAACGTATTGTTAGCG
ATGCGGCGGCGATTACGCTCCCCACGCAACTTCTGATATCAGGCGATGACTATGTGGTGCATCGCCAACCGCAGATTGAT
TTTTATCATAGATTACGTAGCCCTCTGAAAGAGCTGCATCTGCTGCCAGGCTTTTATCACGACACGTTGGGTGAAGAGAA
CAGGGCGCAGGCATTTGAAAAAATGCAAAGCTTTATTAGTCGTTTATATGCTAACAAGTCACAAAAATTTGATTATCAGC
ATGAAGACCGCACTGGACCATCAGCGGATCGCTGGCGGCTCCTTTCAGGTGGACCCGTGCCATTATCGCCGGTTGATTTG
GCGTATCGCTTTATGCGTAAAGCGATGAAATTGTTCGGGACGCACTCTGCGGGCCTGCATCTCGGAATGAGCACCGGCTT
TGATTCAGGCAGTTCGCTGGATTATGTCTATCAAAATCAACCGCAAGGTAGTAACGCATTCGGGCGCTTAATCGACAAAA
TCTACCTGAACAGTGTTGGCTGGCGCGGTATTCGCCAGCGCAAAACCCATTTACAAATACTGATTAAACAAGCCGTTGCC
GATCTCCACGCCAAAGGTTTAGCCGTCCGCGTGGTTGACATTGCCGCAGGGCATGGGCGCTATGTACTGGATGCGCTGGC
AAACGAGCCTGCCGTAAGCGATATTTTGTTACGTGATTACAGCGAGTTAAATGTTGCACAGGGGCAAGAGATGATTGCTC
AACGGGGAATGTCTGGGCGGGTGCGTTTTGAACAGGGCGATGCGTTTAACCCGGAGGAACTCAGCGCGTTAACTCCGCGG
CCTACGCTGGCGATTGTCTCTGGACTGTATGAGCTTTTTCCCGGAAATGAGCAGGTAAAAAACTCACTCGCAGGTCTTGC
CAATGCCATCGAACCGGGCGGCATTCTCCTCTACACCGGGCAGCCGTGGCACCCACAACTGGAGCTGATTGCCGGGGTGT
TAACCAGTCATAAAGATGGTAAACCGTGGGTAATGCGCGTGCGTTCGCAAGGGGAGATGGATTCACTCGTGCGTGATGCC
GGATTTGATAAATGCACACAACGGATTGATGAGTGGGGCATTTTTACGGTTTCGATGGCGGTGCGTCGTGATAACTGA

Upstream 100 bases:

>100_bases
ACATGGCGGACTCCTTGACAGGATTGACTCATTAATTTTCACCGCTCCGGTATTTTTTTATTTTATTCGCTACTGCTGTT
ACTGAAGGAAAATAGAGAAA

Downstream 100 bases:

>100_bases
ACGCCGGAACGTATTGCTACAAGGCGCTGGCTGGTTATTGTTGCTGGCCCCGTTTTTCTTCTTCACCTATGGATCTCTAA
ATCAGTTCACCGCGGTTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MENSRIPGEHFFTTSDNTALFYRHWPALQPGAKKVIVLFHRGHEHSGRLQHIVDELAMPDTAFYAWDARGHGQTSGPRGY
SPSLARSVRDVDEFVRFAASDSQVGLEEVVVIAQSVGAVLVATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHR
LRGLFFINSYVKGRYLTHDRQRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAITLPTQLLISGDDYVVHRQPQID
FYHRLRSPLKELHLLPGFYHDTLGEENRAQAFEKMQSFISRLYANKSQKFDYQHEDRTGPSADRWRLLSGGPVPLSPVDL
AYRFMRKAMKLFGTHSAGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLIDKIYLNSVGWRGIRQRKTHLQILIKQAVA
DLHAKGLAVRVVDIAAGHGRYVLDALANEPAVSDILLRDYSELNVAQGQEMIAQRGMSGRVRFEQGDAFNPEELSALTPR
PTLAIVSGLYELFPGNEQVKNSLAGLANAIEPGGILLYTGQPWHPQLELIAGVLTSHKDGKPWVMRVRSQGEMDSLVRDA
GFDKCTQRIDEWGIFTVSMAVRRDN

Sequences:

>Translated_585_residues
MENSRIPGEHFFTTSDNTALFYRHWPALQPGAKKVIVLFHRGHEHSGRLQHIVDELAMPDTAFYAWDARGHGQTSGPRGY
SPSLARSVRDVDEFVRFAASDSQVGLEEVVVIAQSVGAVLVATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHR
LRGLFFINSYVKGRYLTHDRQRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAITLPTQLLISGDDYVVHRQPQID
FYHRLRSPLKELHLLPGFYHDTLGEENRAQAFEKMQSFISRLYANKSQKFDYQHEDRTGPSADRWRLLSGGPVPLSPVDL
AYRFMRKAMKLFGTHSAGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLIDKIYLNSVGWRGIRQRKTHLQILIKQAVA
DLHAKGLAVRVVDIAAGHGRYVLDALANEPAVSDILLRDYSELNVAQGQEMIAQRGMSGRVRFEQGDAFNPEELSALTPR
PTLAIVSGLYELFPGNEQVKNSLAGLANAIEPGGILLYTGQPWHPQLELIAGVLTSHKDGKPWVMRVRSQGEMDSLVRDA
GFDKCTQRIDEWGIFTVSMAVRRDN
>Mature_585_residues
MENSRIPGEHFFTTSDNTALFYRHWPALQPGAKKVIVLFHRGHEHSGRLQHIVDELAMPDTAFYAWDARGHGQTSGPRGY
SPSLARSVRDVDEFVRFAASDSQVGLEEVVVIAQSVGAVLVATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHR
LRGLFFINSYVKGRYLTHDRQRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAITLPTQLLISGDDYVVHRQPQID
FYHRLRSPLKELHLLPGFYHDTLGEENRAQAFEKMQSFISRLYANKSQKFDYQHEDRTGPSADRWRLLSGGPVPLSPVDL
AYRFMRKAMKLFGTHSAGLHLGMSTGFDSGSSLDYVYQNQPQGSNAFGRLIDKIYLNSVGWRGIRQRKTHLQILIKQAVA
DLHAKGLAVRVVDIAAGHGRYVLDALANEPAVSDILLRDYSELNVAQGQEMIAQRGMSGRVRFEQGDAFNPEELSALTPR
PTLAIVSGLYELFPGNEQVKNSLAGLANAIEPGGILLYTGQPWHPQLELIAGVLTSHKDGKPWVMRVRSQGEMDSLVRDA
GFDKCTQRIDEWGIFTVSMAVRRDN

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787678, Length=585, Percent_Identity=97.4358974358974, Blast_Score=1178, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022742
- InterPro:   IPR022744 [H]

Pfam domain/function: PF12146 Hydrolase_4; PF12147 Hydrolase_5 [H]

EC number: NA

Molecular weight: Translated: 65400; Mature: 65400

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSRIPGEHFFTTSDNTALFYRHWPALQPGAKKVIVLFHRGHEHSGRLQHIVDELAMPD
CCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCC
TAFYAWDARGHGQTSGPRGYSPSLARSVRDVDEFVRFAASDSQVGLEEVVVIAQSVGAVL
CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHRLRGLFFINSYVKGRYLTHDR
HHHHHHHHHHHHHHHHEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
QRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAITLPTQLLISGDDYVVHRQPQID
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECEEEEECCCCEEEECCCCHH
FYHRLRSPLKELHLLPGFYHDTLGEENRAQAFEKMQSFISRLYANKSQKFDYQHEDRTGP
HHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SADRWRLLSGGPVPLSPVDLAYRFMRKAMKLFGTHSAGLHLGMSTGFDSGSSLDYVYQNQ
CHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEECCC
PQGSNAFGRLIDKIYLNSVGWRGIRQRKTHLQILIKQAVADLHAKGLAVRVVDIAAGHGR
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCH
YVLDALANEPAVSDILLRDYSELNVAQGQEMIAQRGMSGRVRFEQGDAFNPEELSALTPR
HHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHCCCCC
PTLAIVSGLYELFPGNEQVKNSLAGLANAIEPGGILLYTGQPWHPQLELIAGVLTSHKDG
CHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCC
KPWVMRVRSQGEMDSLVRDAGFDKCTQRIDEWGIFTVSMAVRRDN
CCCEEEECCCCCHHHHHHHCCHHHHHHHHHHCCEEEEEEEEECCC
>Mature Secondary Structure
MENSRIPGEHFFTTSDNTALFYRHWPALQPGAKKVIVLFHRGHEHSGRLQHIVDELAMPD
CCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCC
TAFYAWDARGHGQTSGPRGYSPSLARSVRDVDEFVRFAASDSQVGLEEVVVIAQSVGAVL
CEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VATWVHDYAPAIRGLVLASPAFKVKLYVPLARPALALWHRLRGLFFINSYVKGRYLTHDR
HHHHHHHHHHHHHHHHEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
QRVASFNNDPLITRAIAVNILLDLYKTSERIVSDAAAITLPTQLLISGDDYVVHRQPQID
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECEEEEECCCCEEEECCCCHH
FYHRLRSPLKELHLLPGFYHDTLGEENRAQAFEKMQSFISRLYANKSQKFDYQHEDRTGP
HHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SADRWRLLSGGPVPLSPVDLAYRFMRKAMKLFGTHSAGLHLGMSTGFDSGSSLDYVYQNQ
CHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEECCC
PQGSNAFGRLIDKIYLNSVGWRGIRQRKTHLQILIKQAVADLHAKGLAVRVVDIAAGHGR
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCH
YVLDALANEPAVSDILLRDYSELNVAQGQEMIAQRGMSGRVRFEQGDAFNPEELSALTPR
HHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHCCCCC
PTLAIVSGLYELFPGNEQVKNSLAGLANAIEPGGILLYTGQPWHPQLELIAGVLTSHKDG
CHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCC
KPWVMRVRSQGEMDSLVRDAGFDKCTQRIDEWGIFTVSMAVRRDN
CCCEEEECCCCCHHHHHHHCCHHHHHHHHHHCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]