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The map label for this gene is yjaH [H]

Identifier: 209396958

GI number: 209396958

Start: 5112564

End: 5113199

Strand: Direct

Name: yjaH [H]

Synonym: ECH74115_5470

Alternate gene names: 209396958

Gene position: 5112564-5113199 (Clockwise)

Preceding gene: 209397488

Following gene: 209397343

Centisome position: 91.75

GC content: 53.62

Gene sequence:

>636_bases
ATGCTGGCTGGCGCTCTGTTTCTCACTGCTTGTAGTCACAACTCTTCACTTCCTCCCTTTACCGCCAGTGGATTTGCTGA
AGACCAGGGCGCGGTACGCATCTGGCGAAAAGACAGCGGCGATAATGTGCATTTTCTTGCCGTGTTTAGCCCGTGGCGCA
GTGGCGATACCACGACGCGAGAGTATCGCTGGCAGGGCGATAACCTCACGCTCATCAATATCAATGTTTACAGCAAACCC
CCGGTGAATATTCGCGCGCGTTTTGACGATCGCGGTGATCTGAGCTTTATGCAACGTGAATCCGATGGGGAAAAGCAGCA
GCTTTCTAACGACCAAATCGATTTATACCGTTATCGGGCTGATCAGATCCGCCAGATTAGCGATGCCTTACGTCAGGGGA
GAGTCGTGCTGCGCCAGGGGCGCTGGCATGCGATGGAACAGACCGTGACCACCTGCGAAGGGCAAACCATTAAACCTGAT
TTAGATTCGCAGGCAATAGCGCATATCGAGCGCCGCCAGAGCCGCTCTTCTGTTGATGTCAGCGTGGCATGGCTGGAAGC
GCCCGAAGGTTCGCAATTACTGTTAGTGGCAAACTCTGATTTCTGTCGCTGGCAACCCAACGAGAAAACGTTCTGA

Upstream 100 bases:

>100_bases
CAAGGCACTGAAAGACGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGT
CTTTCTGGCGTCGATCATTG

Downstream 100 bases:

>100_bases
TTTACCAGTGGCCCATACCCATATGACCGCCACCACCGCAGCCGCCGTAGCCCATGCCCATTCCGGCTCCGCGCGGAATA
CCCGCTTCAGCCATCGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLAGALFLTACSHNSSLPPFTASGFAEDQGAVRIWRKDSGDNVHFLAVFSPWRSGDTTTREYRWQGDNLTLININVYSKP
PVNIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRADQIRQISDALRQGRVVLRQGRWHAMEQTVTTCEGQTIKPD
LDSQAIAHIERRQSRSSVDVSVAWLEAPEGSQLLLVANSDFCRWQPNEKTF

Sequences:

>Translated_211_residues
MLAGALFLTACSHNSSLPPFTASGFAEDQGAVRIWRKDSGDNVHFLAVFSPWRSGDTTTREYRWQGDNLTLININVYSKP
PVNIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRADQIRQISDALRQGRVVLRQGRWHAMEQTVTTCEGQTIKPD
LDSQAIAHIERRQSRSSVDVSVAWLEAPEGSQLLLVANSDFCRWQPNEKTF
>Mature_211_residues
MLAGALFLTACSHNSSLPPFTASGFAEDQGAVRIWRKDSGDNVHFLAVFSPWRSGDTTTREYRWQGDNLTLININVYSKP
PVNIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRADQIRQISDALRQGRVVLRQGRWHAMEQTVTTCEGQTIKPD
LDSQAIAHIERRQSRSSVDVSVAWLEAPEGSQLLLVANSDFCRWQPNEKTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790434, Length=211, Percent_Identity=99.0521327014218, Blast_Score=434, Evalue=1e-123,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010858
- InterPro:   IPR012640
- InterPro:   IPR016500 [H]

Pfam domain/function: PF07356 DUF1481; PF08139 VirB [H]

EC number: NA

Molecular weight: Translated: 24064; Mature: 24064

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAGALFLTACSHNSSLPPFTASGFAEDQGAVRIWRKDSGDNVHFLAVFSPWRSGDTTTR
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCE
EYRWQGDNLTLININVYSKPPVNIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRA
EEEECCCCEEEEEEEEECCCCCEEEEEECCCCCCCEEECCCCCCHHHHCCCCEEEEEHHH
DQIRQISDALRQGRVVLRQGRWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDV
HHHHHHHHHHHHCEEEEECCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCEE
SVAWLEAPEGSQLLLVANSDFCRWQPNEKTF
EEEEEECCCCCEEEEEECCCCEEECCCCCCC
>Mature Secondary Structure
MLAGALFLTACSHNSSLPPFTASGFAEDQGAVRIWRKDSGDNVHFLAVFSPWRSGDTTTR
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCE
EYRWQGDNLTLININVYSKPPVNIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRA
EEEECCCCEEEEEEEEECCCCCEEEEEECCCCCCCEEECCCCCCHHHHCCCCEEEEEHHH
DQIRQISDALRQGRVVLRQGRWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDV
HHHHHHHHHHHHCEEEEECCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCCEE
SVAWLEAPEGSQLLLVANSDFCRWQPNEKTF
EEEEEECCCCCEEEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]