Definition Escherichia coli O157:H7 str. EC4115, complete genome.
Accession NC_011353
Length 5,572,075

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The map label for this gene is ycjY [C]

Identifier: 209396830

GI number: 209396830

Start: 331474

End: 332610

Strand: Direct

Name: ycjY [C]

Synonym: ECH74115_0327

Alternate gene names: 209396830

Gene position: 331474-332610 (Clockwise)

Preceding gene: 209398970

Following gene: 209400131

Centisome position: 5.95

GC content: 53.47

Gene sequence:

>1137_bases
ATGAAAGCCTTCACCCGAACGCTAAAAACCGCGATGCCGGTCATGCTGCTTTTCGCATCATTAAGTGGAGTCACGACAAT
GAGTTATGCTGATTCAACCAATCCTAATGCCCCTGTGTCCATGACCGATAAATGGGATAAAACGTTCGCCGAGAGCCAGA
AAGTCGATCACCGTAAAGTCTCGTTCCCGAACCGATATGGCATCACCTTAGTGGGCGATCTTTACCTGCCTAAAGACCGT
GGCGATCGCAAGCTGGCGGCGATTGCGGTCAGTGGGCCATTTGGCGCGGTGAAAGAGCAATCCAGCGGCTTGTATGCGCA
GACGCTGGCGGAACGAGGGTTTGTTACCCTGGCGTTCGATCCTTCTTACACCGGGGAAAGCGGCGGCTATCCGCGAAATG
TCGCCTCACCGGATATCAACACTGAAGATTTCAGCGCGGCGGTGGATTTCTTAGGGCTGCAAAAAGAGGTAGATCGCAAC
CGTATCGGGCTGCTCGGTATTTGTGGCTGGGGCGGCATGGCGCTGAACGACGCGGCGATGGATACCCGCGTTAAAGCGGT
TGCTACCAGCGTGATGTATGACATGAGCCGGGCGATGGGCCATGGTGTGGGGGATGGCGAAGACCGTTATTCTACCGCCG
ACCGTCGTGCTGTTCTGCAATATTTGAATGAACAGCGCTGGAAGGATGCGCAGAGCGGAACGTTCGCTCACGGTGGTCAT
GATATTAATGTCGATAGCAACGGCAAGGTCAGTGCGGGCGAGCGCATTCTGCCAGAAACGCTGCCGGCAAATCCTCATCC
GGTACTGAAAGAGTTCTTTGACTACTATCGCATGCCGCGCGGCTTCCACGAACGTTCCGTTAACTCTACCGGGGCGTGGA
CGGCAACGATGCCGCTGTCATTTATGAATATGCCGCTGTTGAGCTACGCCAGTGAAATCACCATTCCGACGCTGATTGTG
ACCGGTGAGAAAGCACATTCACGCTATTTTGCTGAAGATGCTTACAAGGCGGTTGGCAGTAAAGACAAAGAGTTGGTGGT
GGTACCAGGGGCAAATCACGTGGACCTGTACGATAACGTGGCCGGAAAAATACCTTTCGCGAAGTTCGAACAATTTTTCC
AGACCAAACTGAAATAA

Upstream 100 bases:

>100_bases
GCACTAATTCTGCTCACTATAATGACCCCATCAAAGTAAAGCACCGCAGCGTTGTCCGTCGGAAACCTGTATCTCTCTGT
TGTTTTTTATGGGGATTTTT

Downstream 100 bases:

>100_bases
AACCTCCCCTGAATTGATGCAAAGCCACCGGTCTATGGCCGGTGGCTTTTATCCTGATCTTTGTGAAATTTCACTATGTC
GACACTAAGCCAAACACCAT

Product: hydrolase of the alpha/beta family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MKAFTRTLKTAMPVMLLFASLSGVTTMSYADSTNPNAPVSMTDKWDKTFAESQKVDHRKVSFPNRYGITLVGDLYLPKDR
GDRKLAAIAVSGPFGAVKEQSSGLYAQTLAERGFVTLAFDPSYTGESGGYPRNVASPDINTEDFSAAVDFLGLQKEVDRN
RIGLLGICGWGGMALNDAAMDTRVKAVATSVMYDMSRAMGHGVGDGEDRYSTADRRAVLQYLNEQRWKDAQSGTFAHGGH
DINVDSNGKVSAGERILPETLPANPHPVLKEFFDYYRMPRGFHERSVNSTGAWTATMPLSFMNMPLLSYASEITIPTLIV
TGEKAHSRYFAEDAYKAVGSKDKELVVVPGANHVDLYDNVAGKIPFAKFEQFFQTKLK

Sequences:

>Translated_378_residues
MKAFTRTLKTAMPVMLLFASLSGVTTMSYADSTNPNAPVSMTDKWDKTFAESQKVDHRKVSFPNRYGITLVGDLYLPKDR
GDRKLAAIAVSGPFGAVKEQSSGLYAQTLAERGFVTLAFDPSYTGESGGYPRNVASPDINTEDFSAAVDFLGLQKEVDRN
RIGLLGICGWGGMALNDAAMDTRVKAVATSVMYDMSRAMGHGVGDGEDRYSTADRRAVLQYLNEQRWKDAQSGTFAHGGH
DINVDSNGKVSAGERILPETLPANPHPVLKEFFDYYRMPRGFHERSVNSTGAWTATMPLSFMNMPLLSYASEITIPTLIV
TGEKAHSRYFAEDAYKAVGSKDKELVVVPGANHVDLYDNVAGKIPFAKFEQFFQTKLK
>Mature_378_residues
MKAFTRTLKTAMPVMLLFASLSGVTTMSYADSTNPNAPVSMTDKWDKTFAESQKVDHRKVSFPNRYGITLVGDLYLPKDR
GDRKLAAIAVSGPFGAVKEQSSGLYAQTLAERGFVTLAFDPSYTGESGGYPRNVASPDINTEDFSAAVDFLGLQKEVDRN
RIGLLGICGWGGMALNDAAMDTRVKAVATSVMYDMSRAMGHGVGDGEDRYSTADRRAVLQYLNEQRWKDAQSGTFAHGGH
DINVDSNGKVSAGERILPETLPANPHPVLKEFFDYYRMPRGFHERSVNSTGAWTATMPLSFMNMPLLSYASEITIPTLIV
TGEKAHSRYFAEDAYKAVGSKDKELVVVPGANHVDLYDNVAGKIPFAKFEQFFQTKLK

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjY [H]

Homologues:

Organism=Escherichia coli, GI221142683, Length=316, Percent_Identity=34.1772151898734, Blast_Score=156, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 41479; Mature: 41479

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFTRTLKTAMPVMLLFASLSGVTTMSYADSTNPNAPVSMTDKWDKTFAESQKVDHRKV
CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEECCCHHHHHHHHHHCCCCCCC
SFPNRYGITLVGDLYLPKDRGDRKLAAIAVSGPFGAVKEQSSGLYAQTLAERGFVTLAFD
CCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCHHHCCCCHHHHHHHHCCEEEEEEC
PSYTGESGGYPRNVASPDINTEDFSAAVDFLGLQKEVDRNRIGLLGICGWGGMALNDAAM
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCHHH
DTRVKAVATSVMYDMSRAMGHGVGDGEDRYSTADRRAVLQYLNEQRWKDAQSGTFAHGGH
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCE
DINVDSNGKVSAGERILPETLPANPHPVLKEFFDYYRMPRGFHERSVNSTGAWTATMPLS
EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCEEEECCHH
FMNMPLLSYASEITIPTLIVTGEKAHSRYFAEDAYKAVGSKDKELVVVPGANHVDLYDNV
HHCCCHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCC
AGKIPFAKFEQFFQTKLK
CCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKAFTRTLKTAMPVMLLFASLSGVTTMSYADSTNPNAPVSMTDKWDKTFAESQKVDHRKV
CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEECCCHHHHHHHHHHCCCCCCC
SFPNRYGITLVGDLYLPKDRGDRKLAAIAVSGPFGAVKEQSSGLYAQTLAERGFVTLAFD
CCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCHHHCCCCHHHHHHHHCCEEEEEEC
PSYTGESGGYPRNVASPDINTEDFSAAVDFLGLQKEVDRNRIGLLGICGWGGMALNDAAM
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCHHH
DTRVKAVATSVMYDMSRAMGHGVGDGEDRYSTADRRAVLQYLNEQRWKDAQSGTFAHGGH
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCE
DINVDSNGKVSAGERILPETLPANPHPVLKEFFDYYRMPRGFHERSVNSTGAWTATMPLS
EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCEEEECCHH
FMNMPLLSYASEITIPTLIVTGEKAHSRYFAEDAYKAVGSKDKELVVVPGANHVDLYDNV
HHCCCHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCC
AGKIPFAKFEQFFQTKLK
CCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1427017; 10984043 [H]