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The map label for this gene is yiaT

Identifier: 209396238

GI number: 209396238

Start: 4595566

End: 4596306

Strand: Reverse

Name: yiaT

Synonym: ECH74115_4953

Alternate gene names: 209396238

Gene position: 4596306-4595566 (Counterclockwise)

Preceding gene: 209400974

Following gene: 209397268

Centisome position: 82.49

GC content: 48.85

Gene sequence:

>741_bases
ATGTTAATTAACCGCAATATTGTGGCGTTATTTGCGTTGCCTTTTATGGCAAGCGCAACTGCTTCTGAATTATCCATTGG
TGCTGGTGCGGCTTATAATGAATCGCCTTATCGCGGTTATAATGAAAATACAAAGGCAATTCCGCTGATTAGTTATGAAG
GTGATTCTTTTTATGTTCGTCAGACCACGTTAGGTTTTATTCTGTCGCAAAGTGAAAAAAATGAACTTAGCCTGACCGCA
TCCTGGATGCCGCTGGAATTTGACCCTGCCGATAATGACGATTATGCCATGCAACAGCTTGATAAGCGTGATAGTACGGC
TATGGCGGGGGTTGCCTGGTATCACCACGAGCGTTGGGGAACCGTGAAAGCCTCTGCAGCTGCGGACGTTCTGGATAACA
GCAACGGCTGGGTGGGGGAGCTATCGGTATTCCACAAAATGCAGATAGGTCGTCTGTCGCTGACACCTGCGCTGGGCGTT
CTCTATTATGACGAGAATTTCAGTGACTATTACTATGGCATTTCAGAGAGTGAGTCCCGTCGTAGCGGTCTGGCAAGTTA
TTCCGCGCAGGATGCCTGGGTGCCCTATGTCAGCCTGACGGCAAAATACCCGATAGGAGAGCACGTCGTATTGATGGCGA
GCGCAGGATACAGCGAGCTGCCGGAAGAGATTACCGACAGCCCGATGATTGATCGTAATGAGAGTTTTACCTTTGTCACC
GGCGTGAGCTGGCGTTTTTAA

Upstream 100 bases:

>100_bases
TTTTATATATTACTATATAAATATGAATCTTGCACCGGAGAAATTGTAAGCATTACTATGCCGACTCTTTTTTATCTTAT
TTTAAAATGGAATACCGGAC

Downstream 100 bases:

>100_bases
TTCACCGGTGGATGTCGGTGCGGCTGGCCTACGCTCTCGCACCGACTTGTATGCCTGATAAGACGTGTTAAGCGTCGCAT
CAGGCAATGTGCTCCTTACG

Product: MltA-interacting protein MipA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MLINRNIVALFALPFMASATASELSIGAGAAYNESPYRGYNENTKAIPLISYEGDSFYVRQTTLGFILSQSEKNELSLTA
SWMPLEFDPADNDDYAMQQLDKRDSTAMAGVAWYHHERWGTVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGV
LYYDENFSDYYYGISESESRRSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMASAGYSELPEEITDSPMIDRNESFTFVT
GVSWRF

Sequences:

>Translated_246_residues
MLINRNIVALFALPFMASATASELSIGAGAAYNESPYRGYNENTKAIPLISYEGDSFYVRQTTLGFILSQSEKNELSLTA
SWMPLEFDPADNDDYAMQQLDKRDSTAMAGVAWYHHERWGTVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGV
LYYDENFSDYYYGISESESRRSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMASAGYSELPEEITDSPMIDRNESFTFVT
GVSWRF
>Mature_246_residues
MLINRNIVALFALPFMASATASELSIGAGAAYNESPYRGYNENTKAIPLISYEGDSFYVRQTTLGFILSQSEKNELSLTA
SWMPLEFDPADNDDYAMQQLDKRDSTAMAGVAWYHHERWGTVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGV
LYYDENFSDYYYGISESESRRSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMASAGYSELPEEITDSPMIDRNESFTFVT
GVSWRF

Specific function: Unknown

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family

Homologues:

Organism=Escherichia coli, GI1790010, Length=246, Percent_Identity=99.1869918699187, Blast_Score=504, Evalue=1e-144,
Organism=Escherichia coli, GI1788082, Length=245, Percent_Identity=37.5510204081633, Blast_Score=185, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIAT_ECO57 (P58224)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   C86033
- PIR:   D91186
- RefSeq:   NP_290163.1
- RefSeq:   NP_312487.1
- ProteinModelPortal:   P58224
- EnsemblBacteria:   EBESCT00000026481
- EnsemblBacteria:   EBESCT00000056808
- GeneID:   915598
- GeneID:   960972
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z5003
- KEGG:   ecs:ECs4460
- GeneTree:   EBGT00050000009458
- HOGENOM:   HBG752379
- OMA:   YVDYYYG
- ProtClustDB:   CLSK880199
- BioCyc:   ECOL83334:ECS4460-MONOMER
- InterPro:   IPR010583

Pfam domain/function: PF06629 MipA

EC number: NA

Molecular weight: Translated: 27370; Mature: 27370

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLINRNIVALFALPFMASATASELSIGAGAAYNESPYRGYNENTKAIPLISYEGDSFYVR
CEECCCCCEEHHHHHHHCCCHHHEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEE
QTTLGFILSQSEKNELSLTASWMPLEFDPADNDDYAMQQLDKRDSTAMAGVAWYHHERWG
EEEEEEEEECCCCCCEEEEEEECEEEECCCCCCHHHHHHHHCCCCHHHHEEEEEECCCCC
TVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGVLYYDENFSDYYYGISESESR
EEECCHHHHHHCCCCCCEEEHHEEEHEECCEEEECCEEEEEEECCCCCCEEECCCCCCHH
RSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMASAGYSELPEEITDSPMIDRNESFTFVT
HHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCHHHCCHHHCCCCCCCCCCCEEEEE
GVSWRF
ECEECC
>Mature Secondary Structure
MLINRNIVALFALPFMASATASELSIGAGAAYNESPYRGYNENTKAIPLISYEGDSFYVR
CEECCCCCEEHHHHHHHCCCHHHEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEE
QTTLGFILSQSEKNELSLTASWMPLEFDPADNDDYAMQQLDKRDSTAMAGVAWYHHERWG
EEEEEEEEECCCCCCEEEEEEECEEEECCCCCCHHHHHHHHCCCCHHHHEEEEEECCCCC
TVKASAAADVLDNSNGWVGELSVFHKMQIGRLSLTPALGVLYYDENFSDYYYGISESESR
EEECCHHHHHHCCCCCCEEEHHEEEHEECCEEEECCEEEEEEECCCCCCEEECCCCCCHH
RSGLASYSAQDAWVPYVSLTAKYPIGEHVVLMASAGYSELPEEITDSPMIDRNESFTFVT
HHCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCHHHCCHHHCCCCCCCCCCCEEEEE
GVSWRF
ECEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796