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The map label for this gene is ymcA [H]

Identifier: 209395798

GI number: 209395798

Start: 1230013

End: 1232109

Strand: Reverse

Name: ymcA [H]

Synonym: ECH74115_1220

Alternate gene names: 209395798

Gene position: 1232109-1230013 (Counterclockwise)

Preceding gene: 209396475

Following gene: 209398304

Centisome position: 22.11

GC content: 52.03

Gene sequence:

>2097_bases
ATGAAGAAGAATTCTTATCTTTTAAGCTGCCTGGCCATTGCCGTCTCCAGTGCCTGTCATGCTGAAGTATTAACCTACCC
GGATCCGCTGGGTTCGTCGCAATCGGACTTTGGCGGCACAGGATTGTTGCAGATGCCAAATGCGCGCATCGCACCGGAAG
GTGAATTCAGCGTCAACTACCGGGATAACGATCAATACCGTTTCTACTCCACCTCCGTGGCGCTGTTTCCATGGCTGGAA
GGCACCATTCGTTATACGGATGTGCGCACACGTAAATATAGCCAGTGGGAAGATTTCAGCGGCGATCAGTCATACAAAGA
CAAATCATTCGATTTTAAACTTCGCCTGTGGGAAGAAGGTTACTGGCTACCGCAAGTGGCGTTTGGTAAACGTGATATTG
CTGGTACGGGTCTGTTTGACGGTGAGTATCTGGTGGCCAGCAAGCAAGCGGGGCCATTTGATTTCACCCTCGGGATGGCA
TGGGGCTACGCCGGTAATGCGGGCAATATTACCAACCCGTTTTGCCGGGTGAGCGATAAATATTGTCATCGCGCAGAGTC
TCACGATGCGGGCGATATCAGCTTTAGCGATATCTTTCGTGGCCCGGCTTCCATCTTTGGCGGCATTGAGTATCAAACGC
CGTGGAATCCCCTGCGTCTGAAACTCGAATACGACGGCAACAATTACCAGAATGATTTCGCTGGCAAACTGCCTCAGGCA
AGCCATTTCAACGTCGGTGCAGTTTATCGCGCTGCCAGCTGGGCAGACCTCAACCTGAGTTATGAACGCGGTAACACGTT
GATGTTTGGTTTCACTTTACGGACCAATTTCAACGATCTGCGCCCTGCCCTGCGCGATACGCCAAAACCGGCATATCAAC
CTGCGCCTGAATCTGAAGGATTGCAGTACACCACGGTAGCAAACCAACTTACCGCCCTGAAGTATAACGCGGGCTTTGAC
GCGCCAGAAATTCAGCTACGCGATAAGACGCTGTATATGTCTGGTCAGCAATACAAATACCGTGACTCTCGTGAAGCGGT
CGATCGTGCCAACCGGATTCTGGTGAATAACCTGCCGCAAGGCGTTGAGAAGATTAGCGTGACGCAAAAGCGCGAGCATA
TGGCGATGGTGACTACCGAAACCGACGTAGCCAGCCTGCGCAAACAGCTGGCAGGTACAGCGCCTGGTCAATCAGAGCCA
CTGCAACAACAACGTGTTGAAGCTGAAGATCTTTCTGCCTTTGGTCGGGGCTACCGTATTCGTGAAGATCGCTTTAGCTA
CTCTTTCAACCCAACACTTTCACAGTCGCTGGGCGGCCCGGAAGATTTCTATATGTTCCAGCTGGGGCTGATGTCCAGCG
CCCGCTACTGGTTTACCGACCACCTGCTGCTTGATGGCGGTATTTTCACCAATATTTACAACAACTACGACAAGTTTAAG
TCTTCGCTGTTGCCCGCGGACTCTACCCTGCCCCGCGTGCGCACGCATATCCGTGATTACGTTCGCAATGACGTTTATCT
CAACAACTTGCAAGCGAATTACTTTGCCGACTTAGGCAATGGTTTCTATGGCCAGGTGTATGGCGGTTATCTGGAAACGA
TGTATGCCGGTGTCGGTTCCGAGCTGCTTTATCGCCCGCTAGATGCCAGCTGGGCGCTGGGTGTGGACGTTAACTACGTG
AAGCAGCGTGACTGGGACAACATGATGCGCTTCACCGATTATTCCACGCCAACTGGTTTCGTGACGGCTTACTGGAACCC
GCCGACGCTCAATGGCGTACTGATGAAACTTAGCGTTGGGCAATATCTGGCAAAAGATAAAGGGGCAACGATCGACGTCG
CCAAACGCTTTGACAGCGGCGTGGCGGTAGGGGTATGGGCGGCAATCAGTAACGTATCTAAAGATGACTACGGCGAAGGC
GGCTTTAGTAAAGGTTTTTATATCTCGATTCCGTTCGACTTGATGACCATTGGACCTAACCGCAACCGCGCGGTGGTTTC
GTGGACACCATTGACGCGTGATGGTGGACAAATGCTGTCACGCAAATACCAGCTCTATCCAATGACGGCAGAGCGAGAAG
TACCGGTTGGACAATAA

Upstream 100 bases:

>100_bases
GCCAGCTTTGGTTAGGCTTTTCTGCGCATGTACTGCCCGAAAAATATGCTGATTTAAATGACCAGATTGTGTCTGTTTTA
ACGCAACGTGTTCCTGACTG

Downstream 100 bases:

>100_bases
CCTGACGTAATTCATAACATTACATTGACTGATAAATATAAACCAATGAAAAAGAACATTTTTAAGTTTTCGGTACTGAC
ATTGGCTGTTCTGTCTTTGA

Product: group 4 capsule (G4C) polysaccharide, lipoprotein YmcA

Products: NA

Alternate protein names: Group 4 capsule protein D homolog [H]

Number of amino acids: Translated: 698; Mature: 698

Protein sequence:

>698_residues
MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQMPNARIAPEGEFSVNYRDNDQYRFYSTSVALFPWLE
GTIRYTDVRTRKYSQWEDFSGDQSYKDKSFDFKLRLWEEGYWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMA
WGYAGNAGNITNPFCRVSDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPLRLKLEYDGNNYQNDFAGKLPQA
SHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTNFNDLRPALRDTPKPAYQPAPESEGLQYTTVANQLTALKYNAGFD
APEIQLRDKTLYMSGQQYKYRDSREAVDRANRILVNNLPQGVEKISVTQKREHMAMVTTETDVASLRKQLAGTAPGQSEP
LQQQRVEAEDLSAFGRGYRIREDRFSYSFNPTLSQSLGGPEDFYMFQLGLMSSARYWFTDHLLLDGGIFTNIYNNYDKFK
SSLLPADSTLPRVRTHIRDYVRNDVYLNNLQANYFADLGNGFYGQVYGGYLETMYAGVGSELLYRPLDASWALGVDVNYV
KQRDWDNMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVGQYLAKDKGATIDVAKRFDSGVAVGVWAAISNVSKDDYGEG
GFSKGFYISIPFDLMTIGPNRNRAVVSWTPLTRDGGQMLSRKYQLYPMTAEREVPVGQ

Sequences:

>Translated_698_residues
MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQMPNARIAPEGEFSVNYRDNDQYRFYSTSVALFPWLE
GTIRYTDVRTRKYSQWEDFSGDQSYKDKSFDFKLRLWEEGYWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMA
WGYAGNAGNITNPFCRVSDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPLRLKLEYDGNNYQNDFAGKLPQA
SHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTNFNDLRPALRDTPKPAYQPAPESEGLQYTTVANQLTALKYNAGFD
APEIQLRDKTLYMSGQQYKYRDSREAVDRANRILVNNLPQGVEKISVTQKREHMAMVTTETDVASLRKQLAGTAPGQSEP
LQQQRVEAEDLSAFGRGYRIREDRFSYSFNPTLSQSLGGPEDFYMFQLGLMSSARYWFTDHLLLDGGIFTNIYNNYDKFK
SSLLPADSTLPRVRTHIRDYVRNDVYLNNLQANYFADLGNGFYGQVYGGYLETMYAGVGSELLYRPLDASWALGVDVNYV
KQRDWDNMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVGQYLAKDKGATIDVAKRFDSGVAVGVWAAISNVSKDDYGEG
GFSKGFYISIPFDLMTIGPNRNRAVVSWTPLTRDGGQMLSRKYQLYPMTAEREVPVGQ
>Mature_698_residues
MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQMPNARIAPEGEFSVNYRDNDQYRFYSTSVALFPWLE
GTIRYTDVRTRKYSQWEDFSGDQSYKDKSFDFKLRLWEEGYWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMA
WGYAGNAGNITNPFCRVSDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPLRLKLEYDGNNYQNDFAGKLPQA
SHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTNFNDLRPALRDTPKPAYQPAPESEGLQYTTVANQLTALKYNAGFD
APEIQLRDKTLYMSGQQYKYRDSREAVDRANRILVNNLPQGVEKISVTQKREHMAMVTTETDVASLRKQLAGTAPGQSEP
LQQQRVEAEDLSAFGRGYRIREDRFSYSFNPTLSQSLGGPEDFYMFQLGLMSSARYWFTDHLLLDGGIFTNIYNNYDKFK
SSLLPADSTLPRVRTHIRDYVRNDVYLNNLQANYFADLGNGFYGQVYGGYLETMYAGVGSELLYRPLDASWALGVDVNYV
KQRDWDNMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVGQYLAKDKGATIDVAKRFDSGVAVGVWAAISNVSKDDYGEG
GFSKGFYISIPFDLMTIGPNRNRAVVSWTPLTRDGGQMLSRKYQLYPMTAEREVPVGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787219, Length=698, Percent_Identity=99.8567335243553, Blast_Score=1444, Evalue=0.0,
Organism=Escherichia coli, GI1790461, Length=696, Percent_Identity=64.5114942528736, Blast_Score=950, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010344 [H]

Pfam domain/function: PF06082 DUF940 [H]

EC number: NA

Molecular weight: Translated: 78672; Mature: 78672

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQMPNARIAPEGEFSVNY
CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEE
RDNDQYRFYSTSVALFPWLEGTIRYTDVRTRKYSQWEDFSGDQSYKDKSFDFKLRLWEEG
CCCCCEEEEECCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
YWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMAWGYAGNAGNITNPFCRVSDK
CCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCHHHCCHH
YCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPLRLKLEYDGNNYQNDFAGKLPQA
HHHHCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
SHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTNFNDLRPALRDTPKPAYQPAPESEG
CCCCCCEEEEECCEEEEEEEEECCCEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCC
LQYTTVANQLTALKYNAGFDAPEIQLRDKTLYMSGQQYKYRDSREAVDRANRILVNNLPQ
EEEEEHHCCEEEEEECCCCCCCCEEEECEEEEECCCCCCCCCHHHHHHHHCEEEECCCCH
GVEKISVTQKREHMAMVTTETDVASLRKQLAGTAPGQSEPLQQQRVEAEDLSAFGRGYRI
HHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHCCCCEE
REDRFSYSFNPTLSQSLGGPEDFYMFQLGLMSSARYWFTDHLLLDGGIFTNIYNNYDKFK
ECCCCCEECCCCHHHHCCCCCCEEEEEEHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHH
SSLLPADSTLPRVRTHIRDYVRNDVYLNNLQANYFADLGNGFYGQVYGGYLETMYAGVGS
HHCCCCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHCCCCEEEHHHHHHHHHHHHCCCH
ELLYRPLDASWALGVDVNYVKQRDWDNMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVG
HHHCCCCCCCEEECCCCHHHHHCCHHHHHHEECCCCCCCEEEEEECCCCCCCEEEEEEHH
QYLAKDKGATIDVAKRFDSGVAVGVWAAISNVSKDDYGEGGFSKGFYISIPFDLMTIGPN
HHHHHCCCCEEEHHHHCCCCCEEEHHHHHHCCCCCCCCCCCCCCCEEEEECEEEEEECCC
RNRAVVSWTPLTRDGGQMLSRKYQLYPMTAEREVPVGQ
CCEEEEEECCCCCCCHHHHHCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQMPNARIAPEGEFSVNY
CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEE
RDNDQYRFYSTSVALFPWLEGTIRYTDVRTRKYSQWEDFSGDQSYKDKSFDFKLRLWEEG
CCCCCEEEEECCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
YWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMAWGYAGNAGNITNPFCRVSDK
CCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCHHHCCHH
YCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPLRLKLEYDGNNYQNDFAGKLPQA
HHHHCCCCCCCCCCHHHHHCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
SHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTNFNDLRPALRDTPKPAYQPAPESEG
CCCCCCEEEEECCEEEEEEEEECCCEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCC
LQYTTVANQLTALKYNAGFDAPEIQLRDKTLYMSGQQYKYRDSREAVDRANRILVNNLPQ
EEEEEHHCCEEEEEECCCCCCCCEEEECEEEEECCCCCCCCCHHHHHHHHCEEEECCCCH
GVEKISVTQKREHMAMVTTETDVASLRKQLAGTAPGQSEPLQQQRVEAEDLSAFGRGYRI
HHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHCCCCEE
REDRFSYSFNPTLSQSLGGPEDFYMFQLGLMSSARYWFTDHLLLDGGIFTNIYNNYDKFK
ECCCCCEECCCCHHHHCCCCCCEEEEEEHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHH
SSLLPADSTLPRVRTHIRDYVRNDVYLNNLQANYFADLGNGFYGQVYGGYLETMYAGVGS
HHCCCCCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHCCCCEEEHHHHHHHHHHHHCCCH
ELLYRPLDASWALGVDVNYVKQRDWDNMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVG
HHHCCCCCCCEEECCCCHHHHHCCHHHHHHEECCCCCCCEEEEEECCCCCCCEEEEEEHH
QYLAKDKGATIDVAKRFDSGVAVGVWAAISNVSKDDYGEGGFSKGFYISIPFDLMTIGPN
HHHHHCCCCEEEHHHHCCCCCEEEHHHHHHCCCCCCCCCCCCCCCEEEEECEEEEEECCC
RNRAVVSWTPLTRDGGQMLSRKYQLYPMTAEREVPVGQ
CCEEEEEECCCCCCCHHHHHCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]