| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
Click here to switch to the map view.
The map label for this gene is 20809036
Identifier: 20809036
GI number: 20809036
Start: 2587869
End: 2588843
Strand: Direct
Name: 20809036
Synonym: TTE2692
Alternate gene names: NA
Gene position: 2587869-2588843 (Clockwise)
Preceding gene: 20809024
Following gene: 20809037
Centisome position: 96.22
GC content: 38.97
Gene sequence:
>975_bases ATGAGCGTTTTTAAATTTTTGGGTGAAAATGACGATTGGGGAAGCACTCCTCTTAGCAACTACTTCATAAACCATTTCAT GTTGGATGCTCCGGGCGAATACGTGAAGGTATACATATTGGGCTTGAAGTATTGCTTCTACGGCAATCAAATTCCCTTGA AAGAACTAGCAGACAAGCTCTTCATGTCAGACTTAGAAATTGATAAAGCTTTAAAATACTGGGAAAAGTCTGGCCTTGTG AAGTTAAAATACATAGATGGAGAATACACAGTAGAGTATCTCCCTGTAGTTCCCCCATCTTCTAACGGCCATTCTCTCTC CCTTTACGACCCTCAAGTAAAGCAGGCTTTTGAAGCAATAGAGCTTACACTTGGAAGGCCTTTAACTCCAACAGAAATGG AAACTTATTTAAGCTGGGTAGACGAATACGGCTTTTCACTGGAAGTCATAACAATGCTTGTAAGCTACTGCGCTTCAAAA AACAAAACCTCTTTAAAATACATGGAAAAAGTCGCTATAGCATGGCATGACGCTGGTCTTAAAACTGCTTTAGATGTAGA AGAATACCTTAAAGCAGAAAGCAGGAGATGGCAGGATTACAGAAGGATATTAAAAGCACTGGGCATGAAGGAAGAAGAGC CAACAGAAGTACAGAGAGAAATGATGGACAGGTGGATGGATGAGCTAGGATTTGATGTGGATATGATAATAAAAGCTGGC GAAGAATGTATCGCGAAGCTAAATGAGCCAAGCTTTCCATATATAAATAGGATTTTGATAAACTGGTTCAATGAAGGAAT AAGAAGTGTAGAAGACCTAGAAAGCAAAAAGTCTTCTTCTAAAAAGAAAACAGCTGCTACTTCTGCCTTTAAAGCCCCAA AGAATTACTTTAACAGCTATTCCCAGAGGACTTATGACATAGAGGATTTGGAAAAAAAGCTTTTAGCCCACTCTAGAGGT GAATTAAATGAATGA
Upstream 100 bases:
>100_bases TAGACTAATATTCTTTCTCGAACATGCCGATAAATATGTTAAATTCTTTTCAATTGAAGAGGACATCCCCCTATGCTATA ATATATTCGAGGTGGGGAGA
Downstream 100 bases:
>100_bases AAATATAATTCATGAGATACTTAAAGAGTATGAAATGAAAAGAGATAAGGCAGAGAGAGAAGCCCTTCTAAGAAGAAACC GACTGTACAAAGAAATACCC
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Replication Protein DnaD; DNAD And Phage-Associated Domain Protein; Chromosome Replication Initiation Protein; Primosome Protein DNAD
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSVFKFLGENDDWGSTPLSNYFINHFMLDAPGEYVKVYILGLKYCFYGNQIPLKELADKLFMSDLEIDKALKYWEKSGLV KLKYIDGEYTVEYLPVVPPSSNGHSLSLYDPQVKQAFEAIELTLGRPLTPTEMETYLSWVDEYGFSLEVITMLVSYCASK NKTSLKYMEKVAIAWHDAGLKTALDVEEYLKAESRRWQDYRRILKALGMKEEEPTEVQREMMDRWMDELGFDVDMIIKAG EECIAKLNEPSFPYINRILINWFNEGIRSVEDLESKKSSSKKKTAATSAFKAPKNYFNSYSQRTYDIEDLEKKLLAHSRG ELNE
Sequences:
>Translated_324_residues MSVFKFLGENDDWGSTPLSNYFINHFMLDAPGEYVKVYILGLKYCFYGNQIPLKELADKLFMSDLEIDKALKYWEKSGLV KLKYIDGEYTVEYLPVVPPSSNGHSLSLYDPQVKQAFEAIELTLGRPLTPTEMETYLSWVDEYGFSLEVITMLVSYCASK NKTSLKYMEKVAIAWHDAGLKTALDVEEYLKAESRRWQDYRRILKALGMKEEEPTEVQREMMDRWMDELGFDVDMIIKAG EECIAKLNEPSFPYINRILINWFNEGIRSVEDLESKKSSSKKKTAATSAFKAPKNYFNSYSQRTYDIEDLEKKLLAHSRG ELNE >Mature_323_residues SVFKFLGENDDWGSTPLSNYFINHFMLDAPGEYVKVYILGLKYCFYGNQIPLKELADKLFMSDLEIDKALKYWEKSGLVK LKYIDGEYTVEYLPVVPPSSNGHSLSLYDPQVKQAFEAIELTLGRPLTPTEMETYLSWVDEYGFSLEVITMLVSYCASKN KTSLKYMEKVAIAWHDAGLKTALDVEEYLKAESRRWQDYRRILKALGMKEEEPTEVQREMMDRWMDELGFDVDMIIKAGE ECIAKLNEPSFPYINRILINWFNEGIRSVEDLESKKSSSKKKTAATSAFKAPKNYFNSYSQRTYDIEDLEKKLLAHSRGE LNE
Specific function: Unknown
COG id: COG3935
COG function: function code L; Putative primosome component and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37550; Mature: 37419
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVFKFLGENDDWGSTPLSNYFINHFMLDAPGEYVKVYILGLKYCFYGNQIPLKELADKL CCHHHHCCCCCCCCCCCHHHHHHHHHEECCCCHHEEHHHHHHHHHHCCCCCCHHHHHHHH FMSDLEIDKALKYWEKSGLVKLKYIDGEYTVEYLPVVPPSSNGHSLSLYDPQVKQAFEAI HHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCCCEEEEECHHHHHHHHHH ELTLGRPLTPTEMETYLSWVDEYGFSLEVITMLVSYCASKNKTSLKYMEKVAIAWHDAGL HHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC KTALDVEEYLKAESRRWQDYRRILKALGMKEEEPTEVQREMMDRWMDELGFDVDMIIKAG HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCC EECIAKLNEPSFPYINRILINWFNEGIRSVEDLESKKSSSKKKTAATSAFKAPKNYFNSY HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH SQRTYDIEDLEKKLLAHSRGELNE HHCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SVFKFLGENDDWGSTPLSNYFINHFMLDAPGEYVKVYILGLKYCFYGNQIPLKELADKL CHHHHCCCCCCCCCCCHHHHHHHHHEECCCCHHEEHHHHHHHHHHCCCCCCHHHHHHHH FMSDLEIDKALKYWEKSGLVKLKYIDGEYTVEYLPVVPPSSNGHSLSLYDPQVKQAFEAI HHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCCCEEEEECHHHHHHHHHH ELTLGRPLTPTEMETYLSWVDEYGFSLEVITMLVSYCASKNKTSLKYMEKVAIAWHDAGL HHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC KTALDVEEYLKAESRRWQDYRRILKALGMKEEEPTEVQREMMDRWMDELGFDVDMIIKAG HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCC EECIAKLNEPSFPYINRILINWFNEGIRSVEDLESKKSSSKKKTAATSAFKAPKNYFNSY HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH SQRTYDIEDLEKKLLAHSRGELNE HHCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA