Click here to switch to the map view.

The map label for this gene is IbpA [H]

Identifier: 20808928

GI number: 20808928

Start: 2468475

End: 2468912

Strand: Direct

Name: IbpA [H]

Synonym: TTE2578

Alternate gene names: 20808928

Gene position: 2468475-2468912 (Clockwise)

Preceding gene: 20808924

Following gene: 20808932

Centisome position: 91.78

GC content: 39.95

Gene sequence:

>438_bases
ATGAGCTTAATGAGAAGAGGAAGAGACTGGTGGGACTGGCCCTTTGACATCAACATAAGAAACCTGCCCAGCATCTTTGA
CATAAATTTCCCTTCCTTATCCGGCCTGTTTTCAAGGCCAAGAGTGGACATAGTAGAATCAGAGACAGAAATAGTTGCAA
CTGCTGAACTTCCCGGAGTTGACAAAAAAGATATAGAAATAAATGTTTACGACAACATATTGGAAATAAAAGGGCAGACT
TCAGTAGACGAAGAAAAAGAGGACAAAAACTATTACATCAGAGAGAGATATTATGGAAGCTTCGCGAGGAGAATTGAGTT
ACCCGCAGAAGTGGACCCTGAAAGGACCACAGCTAAATTTGAAAATGGAATACTCAAAATCACAATGCCAAAACTCCATC
CGAGCAAGCCAAAGAAAAGAAGAATTGATATAGAGTAA

Upstream 100 bases:

>100_bases
AAAATAAGAATTAAATGTGAAGTTTTTGTGAATCCTAATAATTGCAAAAATTTATCAATGTGCTATAATAAATAATAGAA
AAATATGGAGGTGATGTAAA

Downstream 100 bases:

>100_bases
AAGAGGCAAGTTACTGCTTGCCTCTTTTACTTTTCTCGCTAAATTACGCAGAGTGATATTTTTATGAAAAAGTACTCTTG
AATAGTACCCCCATAAAAAA

Product: molecular chaperone (small heat shock protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSLMRRGRDWWDWPFDINIRNLPSIFDINFPSLSGLFSRPRVDIVESETEIVATAELPGVDKKDIEINVYDNILEIKGQT
SVDEEKEDKNYYIRERYYGSFARRIELPAEVDPERTTAKFENGILKITMPKLHPSKPKKRRIDIE

Sequences:

>Translated_145_residues
MSLMRRGRDWWDWPFDINIRNLPSIFDINFPSLSGLFSRPRVDIVESETEIVATAELPGVDKKDIEINVYDNILEIKGQT
SVDEEKEDKNYYIRERYYGSFARRIELPAEVDPERTTAKFENGILKITMPKLHPSKPKKRRIDIE
>Mature_144_residues
SLMRRGRDWWDWPFDINIRNLPSIFDINFPSLSGLFSRPRVDIVESETEIVATAELPGVDKKDIEINVYDNILEIKGQTS
VDEEKEDKNYYIRERYYGSFARRIELPAEVDPERTTAKFENGILKITMPKLHPSKPKKRRIDIE

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17074; Mature: 16942

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLMRRGRDWWDWPFDINIRNLPSIFDINFPSLSGLFSRPRVDIVESETEIVATAELPGV
CCHHHCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEEEECCCCC
DKKDIEINVYDNILEIKGQTSVDEEKEDKNYYIRERYYGSFARRIELPAEVDPERTTAKF
CCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHEEECCCCCCCCCHHHHH
ENGILKITMPKLHPSKPKKRRIDIE
HCCEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLMRRGRDWWDWPFDINIRNLPSIFDINFPSLSGLFSRPRVDIVESETEIVATAELPGV
CHHHCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEEEECCCCC
DKKDIEINVYDNILEIKGQTSVDEEKEDKNYYIRERYYGSFARRIELPAEVDPERTTAKF
CCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHEEECCCCCCCCCHHHHH
ENGILKITMPKLHPSKPKKRRIDIE
HCCEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA