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The map label for this gene is DdpX [H]

Identifier: 20808889

GI number: 20808889

Start: 2426990

End: 2427751

Strand: Reverse

Name: DdpX [H]

Synonym: TTE2535

Alternate gene names: 20808889

Gene position: 2427751-2426990 (Counterclockwise)

Preceding gene: 20808890

Following gene: 20808888

Centisome position: 90.27

GC content: 40.68

Gene sequence:

>762_bases
ATGAGTGATAAAAATTTTAAGGAAATACCTATTTCCACTCCAATCGAAAAGTGGAATTGGGAAGAGGTTAGAAAGATTCC
GATAAGAGAAAATAATGAAAAGCTGGTTCCTTTAAGTTTATATCCCGAGAGGATAATAGTGCGCTCAGAGTACTTTCTTC
AGGGGATAAAAGGTGCTCTTCCTGAATGTTACGTGAGAGAGAGTGTATATGAAAAATTACTAGAAGCGGCTGATTTATTG
CCACCGGGATATAAGTTTGTGATTTTTGATACGTGGAGACCTATTCAGGTGCAGCAATCTCTGTTTGATACTTTAAAGGA
ACAGTTTAGGAAGCAATATCCTTCTGAATCGGAAGAAGAGATTACTAAAAGAACCTTGACATTTGTTGCATTACCTTCTA
CAGATCCTACGAGGCCTTCGCCCCACAACACCGGAGGGGCTGTTGACCTGACAATTGCAGATGACAAGGGAAGGCTGCTC
AATATGGGAACAGAGTATGACGATCCTACGGAAAAGGCAAGGACTACTTATTTTGAAGAGTTGTTGAAAGAAGGCAAGGA
GCTTTCAAAAGAGGAAAGGGAAGCCTTGGAAAATCGCAGGTTACTCTTTAATATCATGACATCAGTGGGTTTTACAAACT
ATTTAGATGAATGGTGGCACTACGACTACGGCAATCAAAATTGGGCGTGGGTGAGCAAGAAAGAATATGCTCTTTACGGT
AGGGCCAAACCTTTCTTTGCTTGGAGAAGCGACATAGAATAA

Upstream 100 bases:

>100_bases
AATACTTTACATGTATTCACCTCGTGAAGAGGACGAAAAGGCCTTGAAAGAATTGGTAGGAGAAGAATATTATAAAATTG
CTGGAGAAAAGGGTGAAAAA

Downstream 100 bases:

>100_bases
GAAAGGAAGCGGGTTTTAATCCGCTTCCTTTTTAAATATTTTGAATAGCGTACTTGAAAATAAGGGGATTGTATGTTAAA
AAATAATAGAAAAGGATTTT

Product: D-alanyl-D-alanine dipeptidase

Products: NA

Alternate protein names: D-Ala-D-Ala dipeptidase [H]

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSDKNFKEIPISTPIEKWNWEEVRKIPIRENNEKLVPLSLYPERIIVRSEYFLQGIKGALPECYVRESVYEKLLEAADLL
PPGYKFVIFDTWRPIQVQQSLFDTLKEQFRKQYPSESEEEITKRTLTFVALPSTDPTRPSPHNTGGAVDLTIADDKGRLL
NMGTEYDDPTEKARTTYFEELLKEGKELSKEEREALENRRLLFNIMTSVGFTNYLDEWWHYDYGNQNWAWVSKKEYALYG
RAKPFFAWRSDIE

Sequences:

>Translated_253_residues
MSDKNFKEIPISTPIEKWNWEEVRKIPIRENNEKLVPLSLYPERIIVRSEYFLQGIKGALPECYVRESVYEKLLEAADLL
PPGYKFVIFDTWRPIQVQQSLFDTLKEQFRKQYPSESEEEITKRTLTFVALPSTDPTRPSPHNTGGAVDLTIADDKGRLL
NMGTEYDDPTEKARTTYFEELLKEGKELSKEEREALENRRLLFNIMTSVGFTNYLDEWWHYDYGNQNWAWVSKKEYALYG
RAKPFFAWRSDIE
>Mature_252_residues
SDKNFKEIPISTPIEKWNWEEVRKIPIRENNEKLVPLSLYPERIIVRSEYFLQGIKGALPECYVRESVYEKLLEAADLLP
PGYKFVIFDTWRPIQVQQSLFDTLKEQFRKQYPSESEEEITKRTLTFVALPSTDPTRPSPHNTGGAVDLTIADDKGRLLN
MGTEYDDPTEKARTTYFEELLKEGKELSKEEREALENRRLLFNIMTSVGFTNYLDEWWHYDYGNQNWAWVSKKEYALYGR
AKPFFAWRSDIE

Specific function: Hydrolyzes D-Ala-D-Ala. May have a role in cell-wall turnover [H]

COG id: COG2173

COG function: function code M; D-alanyl-D-alanine dipeptidase

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR000755 [H]

Pfam domain/function: PF01427 Peptidase_M15 [H]

EC number: =3.4.13.22 [H]

Molecular weight: Translated: 29884; Mature: 29753

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKNFKEIPISTPIEKWNWEEVRKIPIRENNEKLVPLSLYPERIIVRSEYFLQGIKGAL
CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCHHEEHHHHHHHHHHCCC
PECYVRESVYEKLLEAADLLPPGYKFVIFDTWRPIQVQQSLFDTLKEQFRKQYPSESEEE
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
ITKRTLTFVALPSTDPTRPSPHNTGGAVDLTIADDKGRLLNMGTEYDDPTEKARTTYFEE
HHHHHEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHH
LLKEGKELSKEEREALENRRLLFNIMTSVGFTNYLDEWWHYDYGNQNWAWVSKKEYALYG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCEEEECCCCEEEEC
RAKPFFAWRSDIE
CCCCCHHHCCCCC
>Mature Secondary Structure 
SDKNFKEIPISTPIEKWNWEEVRKIPIRENNEKLVPLSLYPERIIVRSEYFLQGIKGAL
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCHHEEHHHHHHHHHHCCC
PECYVRESVYEKLLEAADLLPPGYKFVIFDTWRPIQVQQSLFDTLKEQFRKQYPSESEEE
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
ITKRTLTFVALPSTDPTRPSPHNTGGAVDLTIADDKGRLLNMGTEYDDPTEKARTTYFEE
HHHHHEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHH
LLKEGKELSKEEREALENRRLLFNIMTSVGFTNYLDEWWHYDYGNQNWAWVSKKEYALYG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCEEEECCCCEEEEC
RAKPFFAWRSDIE
CCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9751644 [H]