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The map label for this gene is RpoE7 [C]

Identifier: 20808763

GI number: 20808763

Start: 2289830

End: 2290330

Strand: Direct

Name: RpoE7 [C]

Synonym: TTE2400

Alternate gene names: 20808763

Gene position: 2289830-2290330 (Clockwise)

Preceding gene: 20808744

Following gene: 20808764

Centisome position: 85.14

GC content: 34.93

Gene sequence:

>501_bases
GTGTTAAAAATAGAGGAGAGTTTCAAAGATATCTTTGAAAGGTATTATCCAAAAGTCTTAAAACAAATCTCCTGGGTTGT
AAAAGATGAATTTAAAGCAGAGGACATTGCGCAGGAGGTATTCATAAAGTTCTTAAAAAAGCCTCCCCGGCACAATGAAA
ATATAGGAGGTTGGCTTTCAAAAGTAGCCATGAACCATGCATTAAACTATCTTCGAACAGAAAGAAGCGCAAGAGTAAGA
GAAATAGAAGCCTTCCAGCAGAATGAAGAAAAACTTTTGGAAGACCCCGAAGAAATAGCTATAAAAAACTTTGAAAAGTC
AAAGGTGAAAGAAGTTCTATTAAAAATGAATAAAAGAGACATGATGTGTTTAATACTTAAGCATTCAGGTTACAGTTATG
AAGAAATAGCAGTCGCTTTGGGAATTAAAAAATCCTCCGTAGGAACAACCATTGCAAGAGCTCAGAAAAAATTCAAGGAA
TTATACGAAAAGGAGGTGTGA

Upstream 100 bases:

>100_bases
GAAAAATTCAGACGAAAGGAACCGTCCCCTTTGTCTGAAAAAGTTTTTGTCACAAAATTGATTTTAGATGTGTTATTATT
AGTGAAAAGGGACAGGGGAG

Downstream 100 bases:

>100_bases
AAGGATGTGCTACGATGAAGGAACCCTTCAGGCGTATTTAGATGGAGAATTGAACGAACTCACCTCAAAAAATATAGAAG
AACACGTAAAAACCTGCAGC

Product: RNA polymerase sigma factor SigX

Products: NA

Alternate protein names: RNA Polymerase Sigma Factor SigX; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase ECF-Type Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-E Factor; Transcriptional Regulator LuxR Family; Group3 RNA Polymerase Sigma Factor; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; RNA Polymerase Sigma Factor Sigma-70 Family; DNA-Directed RNA Polymeracialized Sigma Subunit

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MLKIEESFKDIFERYYPKVLKQISWVVKDEFKAEDIAQEVFIKFLKKPPRHNENIGGWLSKVAMNHALNYLRTERSARVR
EIEAFQQNEEKLLEDPEEIAIKNFEKSKVKEVLLKMNKRDMMCLILKHSGYSYEEIAVALGIKKSSVGTTIARAQKKFKE
LYEKEV

Sequences:

>Translated_166_residues
MLKIEESFKDIFERYYPKVLKQISWVVKDEFKAEDIAQEVFIKFLKKPPRHNENIGGWLSKVAMNHALNYLRTERSARVR
EIEAFQQNEEKLLEDPEEIAIKNFEKSKVKEVLLKMNKRDMMCLILKHSGYSYEEIAVALGIKKSSVGTTIARAQKKFKE
LYEKEV
>Mature_166_residues
MLKIEESFKDIFERYYPKVLKQISWVVKDEFKAEDIAQEVFIKFLKKPPRHNENIGGWLSKVAMNHALNYLRTERSARVR
EIEAFQQNEEKLLEDPEEIAIKNFEKSKVKEVLLKMNKRDMMCLILKHSGYSYEEIAVALGIKKSSVGTTIARAQKKFKE
LYEKEV

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Is Involved In Heat Shock And Oxidative Stress Response; It Is Believed To Control Protein Processing

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: <10 [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19587; Mature: 19587

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00622 HTH_LUXR_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIEESFKDIFERYYPKVLKQISWVVKDEFKAEDIAQEVFIKFLKKPPRHNENIGGWLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
KVAMNHALNYLRTERSARVREIEAFQQNEEKLLEDPEEIAIKNFEKSKVKEVLLKMNKRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCC
MMCLILKHSGYSYEEIAVALGIKKSSVGTTIARAQKKFKELYEKEV
CEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKIEESFKDIFERYYPKVLKQISWVVKDEFKAEDIAQEVFIKFLKKPPRHNENIGGWLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
KVAMNHALNYLRTERSARVREIEAFQQNEEKLLEDPEEIAIKNFEKSKVKEVLLKMNKRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCC
MMCLILKHSGYSYEEIAVALGIKKSSVGTTIARAQKKFKELYEKEV
CEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA