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The map label for this gene is gerKB [H]

Identifier: 20808744

GI number: 20808744

Start: 2269256

End: 2270365

Strand: Direct

Name: gerKB [H]

Synonym: TTE2380

Alternate gene names: 20808744

Gene position: 2269256-2270365 (Clockwise)

Preceding gene: 20808730

Following gene: 20808763

Centisome position: 84.38

GC content: 37.21

Gene sequence:

>1110_bases
ATGCTTAAAGGAATGGAACAATTTGAAAGGACAAGCGAAAAGAAAATATCGACAAAACAACTGGTATTTTTCCTTGTCAC
CACAGTTATATCTACAGCAGATGTATTCTTGCCTTCTTTTGTAGCATTGGCTGCAAAGCAGGACTCCTGGATTTCTGTAA
TAATTTCCTTTCTTGTCTCAAGCGGTATTTTTGTATTTTACTACAAGCTTGCAATGATGTTTAAAGAAGAAATACTTTTT
TCTTATGTTGACAAAATTGTAGGAAGTTTTTTAGGGAAAGTGATATCTTTTCTTTATCTCCTTTTTATACTTCACGGAAT
TTCCCTTGTGATGAGAGAATTAATAGAAATAATGGTAAACGCTTTTATGCCTCATACCCCACCTATAGTGTTTTACGTAG
TTTTAATGGTGTCAGTTATGTATACTGTATCAAAGGGATTTCTCGCGATAGTGAAATTGAATGAACTGCTCTTCCCTTTT
GGAATGCTTCTTTTAGCTTTTGTAATAGTCCTTGACCTCCCAAAGGTGGACATGAGAAATTTTCTCCCAATACTTGAAAA
CGGGATAATGGCTCCCATAATCGGTTCTGTGCTCATAACGCCTTTTATGCTGGAGACAGTGATAATACTTTTCATCTTCC
CACATATCTCTCAAAAAGAAAAAGCTCTAAAAGGAGGAATTATAAGCCTTGGAATACTTGCTCTGAGCATGATGCTGGGG
GTACTAGCTATAGGCATATTCGGGGTAAAGACGGCTGCCAATTTTCAGTTTACAGCTCTCGAAATGGTGAGAAATATAAG
GATAAGCGACTACATCCAGAGGTTTGACTCTCTCGTTATGGCCATGTGGCTTATGGGAATTTATATAAAGATCGTAATAT
TCACCTATCTCTTTGCTAAAGGATTAGCCGAGACCATTAAATCTACTGATTACAGGTTTATACTTCTCCCCCTTGCCACA
TTGTTAATACCGCTAGCCGAAAATGTATCCGAAAGTTTGGATGGCTTGTACACATATTTTCAGAGGTGTTTCCCCTTTGA
GGGATTCTGGTTTGAGGTGTTCTTCCCCCTACTCCTTTACACAATTGCAAAAATTAGAAAAATAAAATGA

Upstream 100 bases:

>100_bases
GAGCCATTTTTTCACCTCCAAAGATTATTATTTCATTTTTTGGAGAATATTATGTTTTTTTGATGCAAATAATATAAAAA
AAGGCACAGAGGGCTGGGAT

Downstream 100 bases:

>100_bases
GAGGAATTATTCTTTATTCCTCTCATATATAATCCTCAATCCCTCTAATGTGAGCATTTCATTGACTGTATCTATTGTCT
TCGATTCCTCTGCAATCATA

Product: germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MLKGMEQFERTSEKKISTKQLVFFLVTTVISTADVFLPSFVALAAKQDSWISVIISFLVSSGIFVFYYKLAMMFKEEILF
SYVDKIVGSFLGKVISFLYLLFILHGISLVMRELIEIMVNAFMPHTPPIVFYVVLMVSVMYTVSKGFLAIVKLNELLFPF
GMLLLAFVIVLDLPKVDMRNFLPILENGIMAPIIGSVLITPFMLETVIILFIFPHISQKEKALKGGIISLGILALSMMLG
VLAIGIFGVKTAANFQFTALEMVRNIRISDYIQRFDSLVMAMWLMGIYIKIVIFTYLFAKGLAETIKSTDYRFILLPLAT
LLIPLAENVSESLDGLYTYFQRCFPFEGFWFEVFFPLLLYTIAKIRKIK

Sequences:

>Translated_369_residues
MLKGMEQFERTSEKKISTKQLVFFLVTTVISTADVFLPSFVALAAKQDSWISVIISFLVSSGIFVFYYKLAMMFKEEILF
SYVDKIVGSFLGKVISFLYLLFILHGISLVMRELIEIMVNAFMPHTPPIVFYVVLMVSVMYTVSKGFLAIVKLNELLFPF
GMLLLAFVIVLDLPKVDMRNFLPILENGIMAPIIGSVLITPFMLETVIILFIFPHISQKEKALKGGIISLGILALSMMLG
VLAIGIFGVKTAANFQFTALEMVRNIRISDYIQRFDSLVMAMWLMGIYIKIVIFTYLFAKGLAETIKSTDYRFILLPLAT
LLIPLAENVSESLDGLYTYFQRCFPFEGFWFEVFFPLLLYTIAKIRKIK
>Mature_369_residues
MLKGMEQFERTSEKKISTKQLVFFLVTTVISTADVFLPSFVALAAKQDSWISVIISFLVSSGIFVFYYKLAMMFKEEILF
SYVDKIVGSFLGKVISFLYLLFILHGISLVMRELIEIMVNAFMPHTPPIVFYVVLMVSVMYTVSKGFLAIVKLNELLFPF
GMLLLAFVIVLDLPKVDMRNFLPILENGIMAPIIGSVLITPFMLETVIILFIFPHISQKEKALKGGIISLGILALSMMLG
VLAIGIFGVKTAANFQFTALEMVRNIRISDYIQRFDSLVMAMWLMGIYIKIVIFTYLFAKGLAETIKSTDYRFILLPLAT
LLIPLAENVSESLDGLYTYFQRCFPFEGFWFEVFFPLLLYTIAKIRKIK

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41971; Mature: 41971

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCC
>Mature Secondary Structure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HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]