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The map label for this gene is gerKC [H]

Identifier: 20808742

GI number: 20808742

Start: 2266428

End: 2267627

Strand: Reverse

Name: gerKC [H]

Synonym: TTE2378

Alternate gene names: 20808742

Gene position: 2267627-2266428 (Counterclockwise)

Preceding gene: 20808743

Following gene: 20808741

Centisome position: 84.32

GC content: 38.25

Gene sequence:

>1200_bases
ATGAGAGGGAAAAAAGTTGTAGCGATGATATTAATTCTTTTGACGACTTTACTCGTTATTGAGGGATGCTGGGATAAAAG
AGAGATAAATCAGCTGGCCTTTGTGCAAGGTTTGGGAATTGAAAAAGGAGAAGATGGAATGATTCACCTTGTAGTGGAGA
TTTTAAAACCTGGGCTTTTAGCGAGCGGCGGAGGACCTGGAGGTGGAACAGGGGGAGGAAGCGCTGTTGGAAAGCCTTAC
GCTGTTTTTCAAGCAAATGGAGTGGACTTTGCCAAGGCTTTTGCCAATTTAAATGACGAGCTTCCCCGCTCTTTGTTTAT
GCAGTATAACGAGATAATATTTTTAGATGAAAAATTTGCTAGATCAGGCATATATCAGACTCTTGACTTTATGACGAGAA
ATCCGGAGTTTAGAAGAACGGCGTACATTTTAGTTGTCACAGGAGGCAGCATACACGAGCTTTTTAATATTCCTTCTTCA
AGTACCTTGGAAAGGTATCCTTATAAAGAAGTCCTTGGGATTATATCAAATCAGGCAAACACTTCTTCCTCTTATGTATG
CGACTTAAATGAATTTATCCAGACACTGGAAATACCTAAAAAAGCCCCTATCACAGGTAAGCTTGAGATTGTAAAGAAAG
ATGGCAAAGCTGTGGGAGTAAGGCTTGTAGGTTCAGCAGTTTTTGACAATGATAAGCTCATAGGCTTTTTAGAAGAGCAG
GATACAAAAGCTGTAACTGTGCTAATGAACAAGTTAAAAAGGAGCACTTTAACACTTGATAAAGGATTAAAAGGCGAAAA
AGCTCACATCTCCCTTGTGATAACCAAAGCAAAAACAGAGATTAAGCCTGTAGTTGAGGGGGATAAAATCTCATTTAACA
TAAAAGTAAATGTAGAAGCTTATTTAAATGAACAGGAGACCAAGTATGACATCACAGAGCCTGAAAAACTACAGCAATTA
GAAGTTATTGTGAGCAGTAAAATAAAATCTGCTATAGAGAGAGCTTTGAACATACTTCAAAAAAAATACAATGCAGATGT
AGTAGGATTTGTAGAAATTCTTCACAGAAGCAAGCCTAAAGTGTGGAAAAAAGTTGTGGAAGACTGGGAAAATATTTACC
CTGATATAAAATTTAATGTAACTGTTAAGACGCACATCCGCCGTTCTGGACTTTCATCCAAACCAATACATCCGAGGTGA

Upstream 100 bases:

>100_bases
TGACTGATGTGTTTATGAGAGTACCGTGGTGGGCAAAAATACTAAGGCCTAGAACTATACAGAGGAAAAACATAATAAGG
CAGGAGGATAAAAGAGGATA

Downstream 100 bases:

>100_bases
TATAGATGGCTTTTAAAATTTTGGGTTTGACTCTCTTGTTTATCTTTTTTTCTATGCTGGAAGTTCCAAGGCTTTTAAGA
GAAAAAAGACTAAAAGAAGT

Product: germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MRGKKVVAMILILLTTLLVIEGCWDKREINQLAFVQGLGIEKGEDGMIHLVVEILKPGLLASGGGPGGGTGGGSAVGKPY
AVFQANGVDFAKAFANLNDELPRSLFMQYNEIIFLDEKFARSGIYQTLDFMTRNPEFRRTAYILVVTGGSIHELFNIPSS
STLERYPYKEVLGIISNQANTSSSYVCDLNEFIQTLEIPKKAPITGKLEIVKKDGKAVGVRLVGSAVFDNDKLIGFLEEQ
DTKAVTVLMNKLKRSTLTLDKGLKGEKAHISLVITKAKTEIKPVVEGDKISFNIKVNVEAYLNEQETKYDITEPEKLQQL
EVIVSSKIKSAIERALNILQKKYNADVVGFVEILHRSKPKVWKKVVEDWENIYPDIKFNVTVKTHIRRSGLSSKPIHPR

Sequences:

>Translated_399_residues
MRGKKVVAMILILLTTLLVIEGCWDKREINQLAFVQGLGIEKGEDGMIHLVVEILKPGLLASGGGPGGGTGGGSAVGKPY
AVFQANGVDFAKAFANLNDELPRSLFMQYNEIIFLDEKFARSGIYQTLDFMTRNPEFRRTAYILVVTGGSIHELFNIPSS
STLERYPYKEVLGIISNQANTSSSYVCDLNEFIQTLEIPKKAPITGKLEIVKKDGKAVGVRLVGSAVFDNDKLIGFLEEQ
DTKAVTVLMNKLKRSTLTLDKGLKGEKAHISLVITKAKTEIKPVVEGDKISFNIKVNVEAYLNEQETKYDITEPEKLQQL
EVIVSSKIKSAIERALNILQKKYNADVVGFVEILHRSKPKVWKKVVEDWENIYPDIKFNVTVKTHIRRSGLSSKPIHPR
>Mature_399_residues
MRGKKVVAMILILLTTLLVIEGCWDKREINQLAFVQGLGIEKGEDGMIHLVVEILKPGLLASGGGPGGGTGGGSAVGKPY
AVFQANGVDFAKAFANLNDELPRSLFMQYNEIIFLDEKFARSGIYQTLDFMTRNPEFRRTAYILVVTGGSIHELFNIPSS
STLERYPYKEVLGIISNQANTSSSYVCDLNEFIQTLEIPKKAPITGKLEIVKKDGKAVGVRLVGSAVFDNDKLIGFLEEQ
DTKAVTVLMNKLKRSTLTLDKGLKGEKAHISLVITKAKTEIKPVVEGDKISFNIKVNVEAYLNEQETKYDITEPEKLQQL
EVIVSSKIKSAIERALNILQKKYNADVVGFVEILHRSKPKVWKKVVEDWENIYPDIKFNVTVKTHIRRSGLSSKPIHPR

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKC lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008844 [H]

Pfam domain/function: PF05504 Spore_GerAC [H]

EC number: NA

Molecular weight: Translated: 44364; Mature: 44364

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGKKVVAMILILLTTLLVIEGCWDKREINQLAFVQGLGIEKGEDGMIHLVVEILKPGLL
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCE
ASGGGPGGGTGGGSAVGKPYAVFQANGVDFAKAFANLNDELPRSLFMQYNEIIFLDEKFA
ECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHCCCCEEEEEHHHH
RSGIYQTLDFMTRNPEFRRTAYILVVTGGSIHELFNIPSSSTLERYPYKEVLGIISNQAN
HHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHCCCCCCCHHHCCHHHHHHHHHCCCC
TSSSYVCDLNEFIQTLEIPKKAPITGKLEIVKKDGKAVGVRLVGSAVFDNDKLIGFLEEQ
CCCCEEECHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEEHEEECCCCEEEEECCC
DTKAVTVLMNKLKRSTLTLDKGLKGEKAHISLVITKAKTEIKPVVEGDKISFNIKVNVEA
CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEE
YLNEQETKYDITEPEKLQQLEVIVSSKIKSAIERALNILQKKYNADVVGFVEILHRSKPK
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCH
VWKKVVEDWENIYPDIKFNVTVKTHIRRSGLSSKPIHPR
HHHHHHHHHHHHCCCCEEEEEEEEHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRGKKVVAMILILLTTLLVIEGCWDKREINQLAFVQGLGIEKGEDGMIHLVVEILKPGLL
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCE
ASGGGPGGGTGGGSAVGKPYAVFQANGVDFAKAFANLNDELPRSLFMQYNEIIFLDEKFA
ECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHCCCCEEEEEHHHH
RSGIYQTLDFMTRNPEFRRTAYILVVTGGSIHELFNIPSSSTLERYPYKEVLGIISNQAN
HHHHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHCCCCCCCHHHCCHHHHHHHHHCCCC
TSSSYVCDLNEFIQTLEIPKKAPITGKLEIVKKDGKAVGVRLVGSAVFDNDKLIGFLEEQ
CCCCEEECHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEEHEEECCCCEEEEECCC
DTKAVTVLMNKLKRSTLTLDKGLKGEKAHISLVITKAKTEIKPVVEGDKISFNIKVNVEA
CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEE
YLNEQETKYDITEPEKLQQLEVIVSSKIKSAIERALNILQKKYNADVVGFVEILHRSKPK
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCH
VWKKVVEDWENIYPDIKFNVTVKTHIRRSGLSSKPIHPR
HHHHHHHHHHHHCCCCEEEEEEEEHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]