Click here to switch to the map view.

The map label for this gene is 20808612

Identifier: 20808612

GI number: 20808612

Start: 2141264

End: 2142058

Strand: Reverse

Name: 20808612

Synonym: TTE2238

Alternate gene names: NA

Gene position: 2142058-2141264 (Counterclockwise)

Preceding gene: 20808613

Following gene: 20808611

Centisome position: 79.65

GC content: 32.7

Gene sequence:

>795_bases
ATGAGGACATTGTATGTTTTCATGGGATATTTTGACTACTCAATAAAAAGACTCTTAATGTATAGAATTTACCTTATAGG
AGAGCTTTTAAGTTCCCTAATTGTACCAATCCTAATAAACTTCTTTCTCTGGAGGTCTTTAATTGAAAGAAATCCCATAA
ATTACACTCTGAAAGAAATGATGATTTATATTATCATTTCTAATGCAATACTTCTATTCACAGAAATTCATGCTGAACAT
GACCTTGAAAAGGATATAAAAACCTACAGATTTGGCCAAAAGCTTTTACTTCCAGTGAATTATCTGACCAGTATTTCATA
CAGTCACATATCTTCAAGCCTTGCAAAGTTTGCAATTTTATATATGCCAGTAATTATTATGACCTCAATTTGGGCAAAAA
TTGAAATCCCAGCAAACCGGCTGTTATACCTACCTTTAGCGTTAATTTTGGGTTTTTTATTCAATGCTTTATTTTCCTTT
ATAATAGGATTGTTATCTTTTTGGCTGACAGAAATATGGGGCATAGCTGCCATCAGAAACTTACTGACAGGTCTTCTTTC
AGGTGCCATTTTCCCTTTAGACCTTTTGCCTAGCAAAATTGAATCAATTATGCTAATGACTCCCTTCCCTTATATGACAT
ACATCCCGTCAAAGCTTATATGTGATGCTAATTTTGACATTGAAATAGTAAATAAAGGATTGTTTATTTCGCTAGTCTGG
GTGTTAATACTTGGTTTCATTGTTTTTTTACTTATGAAAAATGGATTAAAAAAATACACCTCTCATGGGGCGTGA

Upstream 100 bases:

>100_bases
TAATGAGAGTTTTGTCAAATGAAGCTGAAATTTCAAATATAAATTTTCACGATGATACTCTCGATATTATCATAGAGTCA
TTGTATAAGGGTGCAGAAAA

Downstream 100 bases:

>100_bases
AAACATGCTAATAGAATCTATAAGATTTTCAATTAAAAAAGCAATTCAATATAGAGCAAATTTGGTAAGCTGGTTTTTGG
CAGACTTATCTTTATACACT

Product: ABC-type multidrug transport system, permease component

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MRTLYVFMGYFDYSIKRLLMYRIYLIGELLSSLIVPILINFFLWRSLIERNPINYTLKEMMIYIIISNAILLFTEIHAEH
DLEKDIKTYRFGQKLLLPVNYLTSISYSHISSSLAKFAILYMPVIIMTSIWAKIEIPANRLLYLPLALILGFLFNALFSF
IIGLLSFWLTEIWGIAAIRNLLTGLLSGAIFPLDLLPSKIESIMLMTPFPYMTYIPSKLICDANFDIEIVNKGLFISLVW
VLILGFIVFLLMKNGLKKYTSHGA

Sequences:

>Translated_264_residues
MRTLYVFMGYFDYSIKRLLMYRIYLIGELLSSLIVPILINFFLWRSLIERNPINYTLKEMMIYIIISNAILLFTEIHAEH
DLEKDIKTYRFGQKLLLPVNYLTSISYSHISSSLAKFAILYMPVIIMTSIWAKIEIPANRLLYLPLALILGFLFNALFSF
IIGLLSFWLTEIWGIAAIRNLLTGLLSGAIFPLDLLPSKIESIMLMTPFPYMTYIPSKLICDANFDIEIVNKGLFISLVW
VLILGFIVFLLMKNGLKKYTSHGA
>Mature_264_residues
MRTLYVFMGYFDYSIKRLLMYRIYLIGELLSSLIVPILINFFLWRSLIERNPINYTLKEMMIYIIISNAILLFTEIHAEH
DLEKDIKTYRFGQKLLLPVNYLTSISYSHISSSLAKFAILYMPVIIMTSIWAKIEIPANRLLYLPLALILGFLFNALFSF
IIGLLSFWLTEIWGIAAIRNLLTGLLSGAIFPLDLLPSKIESIMLMTPFPYMTYIPSKLICDANFDIEIVNKGLFISLVW
VLILGFIVFLLMKNGLKKYTSHGA

Specific function: Unknown

COG id: COG4587

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30477; Mature: 30477

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLYVFMGYFDYSIKRLLMYRIYLIGELLSSLIVPILINFFLWRSLIERNPINYTLKEM
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
MIYIIISNAILLFTEIHAEHDLEKDIKTYRFGQKLLLPVNYLTSISYSHISSSLAKFAIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMPVIIMTSIWAKIEIPANRLLYLPLALILGFLFNALFSFIIGLLSFWLTEIWGIAAIRN
HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTGLLSGAIFPLDLLPSKIESIMLMTPFPYMTYIPSKLICDANFDIEIVNKGLFISLVW
HHHHHHHCCCCCHHHHHHHHHHEEHCCCCCHHHHCCHHHEECCCCCEEECCCCHHHHHHH
VLILGFIVFLLMKNGLKKYTSHGA
HHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRTLYVFMGYFDYSIKRLLMYRIYLIGELLSSLIVPILINFFLWRSLIERNPINYTLKEM
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
MIYIIISNAILLFTEIHAEHDLEKDIKTYRFGQKLLLPVNYLTSISYSHISSSLAKFAIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YMPVIIMTSIWAKIEIPANRLLYLPLALILGFLFNALFSFIIGLLSFWLTEIWGIAAIRN
HHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLTGLLSGAIFPLDLLPSKIESIMLMTPFPYMTYIPSKLICDANFDIEIVNKGLFISLVW
HHHHHHHCCCCCHHHHHHHHHHEEHCCCCCHHHHCCHHHEECCCCCEEECCCCHHHHHHH
VLILGFIVFLLMKNGLKKYTSHGA
HHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA