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The map label for this gene is ybbR [H]

Identifier: 20808586

GI number: 20808586

Start: 2115893

End: 2117083

Strand: Reverse

Name: ybbR [H]

Synonym: TTE2207

Alternate gene names: 20808586

Gene position: 2117083-2115893 (Counterclockwise)

Preceding gene: 20808587

Following gene: 20808585

Centisome position: 78.72

GC content: 39.63

Gene sequence:

>1191_bases
ATGCTGACTAAAAATTTTACTATAAAGCTCCTGTCGCTGATACTGGCTTTTTTATTATGGCTTTATGTGATGGGGGAAGA
AAATCCGGAAATTCCTTATGAGATTAGCAATGTCCCTGTAAAGTTAGTAAATGTGGATACTCTTGAGAAAAAGGGTTTGA
CTTTGCTTGAGGAAAAGGGATATACGGTGAATGTGAAGGTGAGAGGGAGAAGAAGCGACGTATTAAACATAGCCGCTCAA
AATATAAGTGCTTATGCGGATTTGAGCCGTGTGACCTCTAAAGGAATAAATGTAATCCCTGTGAGGATAGAGGGGCTTCC
CAAAAATGTCTCTTTAGTTTCTGTAATTCCTCCCGAGATAAAAGTAGATGTGGACACTATTGCCAAAATTCAGATGCCTG
TTACGGTAAAGATAGTGGGAAATGTGATGGATGGATATGCTATGCAGCCGGCGGTTCCGACTCCTGGCGAAGTGATGGTG
GTAGGACCAGAGAGCAAAGTAAATCTTGTAAAAAATGTGATTGCACAGGTGAATGTCTCCTACAAAAAAGAGGATATTAA
GATATCTGTCCCAGCTGTGGCTGTAGATAGGGAAGGCAAGGAGATAAAAGGGGTTACAGTTACACCAAATCTTGTGGAAG
TTTACATTCCGGTAAACAAATCAATAAGAGTTCCAGTGACTCCTAAAATATTTGGCAAACCTCAGGAGGGCTATGTAGTT
GCTTCTGTAAATGTTCTTCCAGAGTATGTATACATCACTGGAGATGAGGATGTCCTTAATACCATAAAGTCCATAAGCAC
AAAACAGATAGATATAACGGGTCTGACAGGACCTGTCACTGAGACGGTGCCTTTTGATTTGCCTGATGGAGTAAAGCTTG
TAAAGAGTGACATAACTGCTAAAGTATATATAGATATACAAAAATTGGCTACAAAAGATGTGACTATAACCAATGTAGAA
GTGAAAGGGGCAGAGGGTAAGAGTGTAACAGTCCAGAATCCAGAAGTAGTTGTTACAATTTCAGGGCCTGAAAGTGTTGT
TGCAGGAGCTACTTCTACAGATTTCACGGCTTACGTCGATGCTTCAAATTTATCTCCTGGTAATTATACTCTGACAGTTA
ATGTAAATACTAAGCTGAATGTCAATATAATTAAAATTCGCCCTGAAAAAGTTAGTGTGACAATTCAGTAG

Upstream 100 bases:

>100_bases
TCTCGCCATCTGGACCCGAAGACTTTAAAAGAGGTTTTGTCTAGCATTTTGGACGTGAAGGAAAATAAGAAGCCTGTTTG
GAGAAAATGGGGGAACAAAC

Downstream 100 bases:

>100_bases
GCGGGAGTTCCCCGCCTATCAATTTTTCCAAAAATCTATCAATTCCACAAAATATAAAGTTGTTATAAAAAAATTTTAAT
CAAAAAGAAGGATTTTTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MLTKNFTIKLLSLILAFLLWLYVMGEENPEIPYEISNVPVKLVNVDTLEKKGLTLLEEKGYTVNVKVRGRRSDVLNIAAQ
NISAYADLSRVTSKGINVIPVRIEGLPKNVSLVSVIPPEIKVDVDTIAKIQMPVTVKIVGNVMDGYAMQPAVPTPGEVMV
VGPESKVNLVKNVIAQVNVSYKKEDIKISVPAVAVDREGKEIKGVTVTPNLVEVYIPVNKSIRVPVTPKIFGKPQEGYVV
ASVNVLPEYVYITGDEDVLNTIKSISTKQIDITGLTGPVTETVPFDLPDGVKLVKSDITAKVYIDIQKLATKDVTITNVE
VKGAEGKSVTVQNPEVVVTISGPESVVAGATSTDFTAYVDASNLSPGNYTLTVNVNTKLNVNIIKIRPEKVSVTIQ

Sequences:

>Translated_396_residues
MLTKNFTIKLLSLILAFLLWLYVMGEENPEIPYEISNVPVKLVNVDTLEKKGLTLLEEKGYTVNVKVRGRRSDVLNIAAQ
NISAYADLSRVTSKGINVIPVRIEGLPKNVSLVSVIPPEIKVDVDTIAKIQMPVTVKIVGNVMDGYAMQPAVPTPGEVMV
VGPESKVNLVKNVIAQVNVSYKKEDIKISVPAVAVDREGKEIKGVTVTPNLVEVYIPVNKSIRVPVTPKIFGKPQEGYVV
ASVNVLPEYVYITGDEDVLNTIKSISTKQIDITGLTGPVTETVPFDLPDGVKLVKSDITAKVYIDIQKLATKDVTITNVE
VKGAEGKSVTVQNPEVVVTISGPESVVAGATSTDFTAYVDASNLSPGNYTLTVNVNTKLNVNIIKIRPEKVSVTIQ
>Mature_396_residues
MLTKNFTIKLLSLILAFLLWLYVMGEENPEIPYEISNVPVKLVNVDTLEKKGLTLLEEKGYTVNVKVRGRRSDVLNIAAQ
NISAYADLSRVTSKGINVIPVRIEGLPKNVSLVSVIPPEIKVDVDTIAKIQMPVTVKIVGNVMDGYAMQPAVPTPGEVMV
VGPESKVNLVKNVIAQVNVSYKKEDIKISVPAVAVDREGKEIKGVTVTPNLVEVYIPVNKSIRVPVTPKIFGKPQEGYVV
ASVNVLPEYVYITGDEDVLNTIKSISTKQIDITGLTGPVTETVPFDLPDGVKLVKSDITAKVYIDIQKLATKDVTITNVE
VKGAEGKSVTVQNPEVVVTISGPESVVAGATSTDFTAYVDASNLSPGNYTLTVNVNTKLNVNIIKIRPEKVSVTIQ

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 YbbR-like domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012505 [H]

Pfam domain/function: PF07949 YbbR [H]

EC number: NA

Molecular weight: Translated: 42829; Mature: 42829

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKNFTIKLLSLILAFLLWLYVMGEENPEIPYEISNVPVKLVNVDTLEKKGLTLLEEKG
CCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCCEEEEEECCCCCCCCEEEECCC
YTVNVKVRGRRSDVLNIAAQNISAYADLSRVTSKGINVIPVRIEGLPKNVSLVSVIPPEI
CEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEECCCE
KVDVDTIAKIQMPVTVKIVGNVMDGYAMQPAVPTPGEVMVVGPESKVNLVKNVIAQVNVS
EEEHHHEEEEECCEEEEEEEECCCCCEECCCCCCCCCEEEECCCHHHHHHHHHHHHEECE
YKKEDIKISVPAVAVDREGKEIKGVTVTPNLVEVYIPVNKSIRVPVTPKIFGKPQEGYVV
EEECCEEEEECEEEECCCCCEEEEEEECCCEEEEEEECCCCEEECCCHHHCCCCCCCEEE
ASVNVLPEYVYITGDEDVLNTIKSISTKQIDITGLTGPVTETVPFDLPDGVKLVKSDITA
EEEEECEEEEEEECCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCEE
KVYIDIQKLATKDVTITNVEVKGAEGKSVTVQNPEVVVTISGPESVVAGATSTDFTAYVD
EEEEEEEHHCCCCEEEEEEEEECCCCCEEEEECCEEEEEECCCCCEEECCCCCCEEEEEE
ASNLSPGNYTLTVNVNTKLNVNIIKIRPEKVSVTIQ
CCCCCCCCEEEEEEECCEEEEEEEEEECCEEEEEEC
>Mature Secondary Structure
MLTKNFTIKLLSLILAFLLWLYVMGEENPEIPYEISNVPVKLVNVDTLEKKGLTLLEEKG
CCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCCEEEEEECCCCCCCCEEEECCC
YTVNVKVRGRRSDVLNIAAQNISAYADLSRVTSKGINVIPVRIEGLPKNVSLVSVIPPEI
CEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEECCCE
KVDVDTIAKIQMPVTVKIVGNVMDGYAMQPAVPTPGEVMVVGPESKVNLVKNVIAQVNVS
EEEHHHEEEEECCEEEEEEEECCCCCEECCCCCCCCCEEEECCCHHHHHHHHHHHHEECE
YKKEDIKISVPAVAVDREGKEIKGVTVTPNLVEVYIPVNKSIRVPVTPKIFGKPQEGYVV
EEECCEEEEECEEEECCCCCEEEEEEECCCEEEEEEECCCCEEECCCHHHCCCCCCCEEE
ASVNVLPEYVYITGDEDVLNTIKSISTKQIDITGLTGPVTETVPFDLPDGVKLVKSDITA
EEEEECEEEEEEECCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCEE
KVYIDIQKLATKDVTITNVEVKGAEGKSVTVQNPEVVVTISGPESVVAGATSTDFTAYVD
EEEEEEEHHCCCCEEEEEEEEECCCCCEEEEECCEEEEEECCCCCEEECCCCCCEEEEEE
ASNLSPGNYTLTVNVNTKLNVNIIKIRPEKVSVTIQ
CCCCCCCCEEEEEEECCEEEEEEEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]