| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is NikR2
Identifier: 20808551
GI number: 20808551
Start: 2087503
End: 2087778
Strand: Reverse
Name: NikR2
Synonym: TTE2167
Alternate gene names: NA
Gene position: 2087778-2087503 (Counterclockwise)
Preceding gene: 20808552
Following gene: 20808550
Centisome position: 77.63
GC content: 41.3
Gene sequence:
>276_bases GTGGGCGAAACAAAGCGGATTCTCGTCAGTTTGCCTCAAAGCCTGCTGGAAGAAGTTGATGTTCTTGCCGCTATGGAAAA CAGAAATCGCAGTGAGTTTATAAGGGAAGCGATGAAATTGTATATACGTGAGAGGAAAAAAGCGCAGATACGAGAAAGCA TGAAAAAGGGTTATATGGAGATGGCAGCTATAAATTCTGAACTTGCGGAAATGGGCCTAACCGCAGAAAATGAATGTTTT GCAGGTTATGAAATGAAACTGAAAAAGTGTGATTGA
Upstream 100 bases:
>100_bases TTAAAAATTTAACTTTTATAGTATAAAATTTACAAATCGTTGACATCATATATATGGTGGTATATAATGAATTATATAGG TGCGTAAGGAGGTCCTGAAA
Downstream 100 bases:
>100_bases TTATGGTAGTGAAAAGAGGAGACTTGTTTTATGCCGATTTAAGCCCTGTGATAGGCTCTGAACAGGGTGGAATTCGGCCT GTACTTATAATTCAAAATGA
Product: transcription regulator
Products: NA
Alternate protein names: CopG Family Transcriptional Regulator; Antitoxin EndoAI; Cytoplasmic Protein; Transcriptional Regulator Copg Family; MazE Of xin/Antitoxin System-Like Protein; CopG Domain-Containing Protein; Helix-Turn-Helix Domain Protein Copg Family; CopG Family Protein
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MGETKRILVSLPQSLLEEVDVLAAMENRNRSEFIREAMKLYIRERKKAQIRESMKKGYMEMAAINSELAEMGLTAENECF AGYEMKLKKCD
Sequences:
>Translated_91_residues MGETKRILVSLPQSLLEEVDVLAAMENRNRSEFIREAMKLYIRERKKAQIRESMKKGYMEMAAINSELAEMGLTAENECF AGYEMKLKKCD >Mature_90_residues GETKRILVSLPQSLLEEVDVLAAMENRNRSEFIREAMKLYIRERKKAQIRESMKKGYMEMAAINSELAEMGLTAENECFA GYEMKLKKCD
Specific function: Unknown
COG id: COG0864
COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10540; Mature: 10408
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 8.8 %Met (Translated Protein) 11.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 7.8 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGETKRILVSLPQSLLEEVDVLAAMENRNRSEFIREAMKLYIRERKKAQIRESMKKGYME CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAAINSELAEMGLTAENECFAGYEMKLKKCD HHHHHHHHHHHCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure GETKRILVSLPQSLLEEVDVLAAMENRNRSEFIREAMKLYIRERKKAQIRESMKKGYME CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAAINSELAEMGLTAENECFAGYEMKLKKCD HHHHHHHHHHHCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA