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The map label for this gene is 20808546

Identifier: 20808546

GI number: 20808546

Start: 2082655

End: 2083005

Strand: Reverse

Name: 20808546

Synonym: TTE2162

Alternate gene names: NA

Gene position: 2083005-2082655 (Counterclockwise)

Preceding gene: 20808547

Following gene: 20808545

Centisome position: 77.45

GC content: 31.34

Gene sequence:

>351_bases
ATGAAGTTATTAGGTATACTAGAAGAAAAACCAAAACCAAAAGTAGTTTTGTATGCAAGAGTATCTACAAATAAACAGGA
AGAATATCTTAAGAATCAGATTAGAAGGCTAGAAGAATATGCCAATTCAAAAGGATGGCAGTATGAAGTTATATCCGAAA
TAGCAAGTGGAGTAAATGAAAATAGAAGGGGGTTATTAAAGTTTTTGAACAAGATAAAAAGAGGAGAAGTTGAAAAAGTT
GTAATAGAATATCCTGATAGGCTAGTGAGATTTGGCTTTAAATACTTTAAATATCTTAATAGCAATAGTAACATCTTTCG
CAGCAAGAATTTACGGACAAAGGGGCGATAA

Upstream 100 bases:

>100_bases
CGATATAAGTAGAATTAGATTAATAAATTGGGAAAAAGAAGGATTAATAACTCCAGTAAGAACACCAAAAGGGAGAAGAA
GGTACAAGAAAGAGGATATA

Downstream 100 bases:

>100_bases
AAAACATGATAGTGATACAGGCTAAACTCATTTTTTTAAATCAACAAGACAAACAAATAGTATTAGACTTAATGAGAAGA
TGGTCATCATGTATGAAATT

Product: site-specific integrase-resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKLLGILEEKPKPKVVLYARVSTNKQEEYLKNQIRRLEEYANSKGWQYEVISEIASGVNENRRGLLKFLNKIKRGEVEKV
VIEYPDRLVRFGFKYFKYLNSNSNIFRSKNLRTKGR

Sequences:

>Translated_116_residues
MKLLGILEEKPKPKVVLYARVSTNKQEEYLKNQIRRLEEYANSKGWQYEVISEIASGVNENRRGLLKFLNKIKRGEVEKV
VIEYPDRLVRFGFKYFKYLNSNSNIFRSKNLRTKGR
>Mature_116_residues
MKLLGILEEKPKPKVVLYARVSTNKQEEYLKNQIRRLEEYANSKGWQYEVISEIASGVNENRRGLLKFLNKIKRGEVEKV
VIEYPDRLVRFGFKYFKYLNSNSNIFRSKNLRTKGR

Specific function: Unknown

COG id: COG2452

COG function: function code L; Predicted site-specific integrase-resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 13802; Mature: 13802

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLGILEEKPKPKVVLYARVSTNKQEEYLKNQIRRLEEYANSKGWQYEVISEIASGVNE
CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
NRRGLLKFLNKIKRGEVEKVVIEYPDRLVRFGFKYFKYLNSNSNIFRSKNLRTKGR
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MKLLGILEEKPKPKVVLYARVSTNKQEEYLKNQIRRLEEYANSKGWQYEVISEIASGVNE
CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
NRRGLLKFLNKIKRGEVEKVVIEYPDRLVRFGFKYFKYLNSNSNIFRSKNLRTKGR
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]