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The map label for this gene is SelD [H]

Identifier: 20808285

GI number: 20808285

Start: 1817611

End: 1818573

Strand: Reverse

Name: SelD [H]

Synonym: TTE1873

Alternate gene names: 20808285

Gene position: 1818573-1817611 (Counterclockwise)

Preceding gene: 20808286

Following gene: 20808284

Centisome position: 67.62

GC content: 39.46

Gene sequence:

>963_bases
TTGGCACAGGTTCTGTGCCAGTTAGAGATAACCTGGAATGAAAATTTGCTAGTTGGTTTGAATACCAATGATGATGCTGC
TGTGTACAGATTAAATGAAGACATTGCGATAGTCCACACAGTTGACTATTTTACTCCTGTGGTGGATGACCCTTATGACT
TTGGACAGATTGCGGCAGCAAATGCCCTAAGTGATGTATATGCCATGGGAGCAGTTCCTTTGTTTGCGCTAAACGTGGTG
TGTTTTCCAGCTGCTTACATTGACGTGCTGAAGGAAGTGTTAAGAGGTGGAAATGACAAAGTGAAAGAAGCTGGAGCTTT
AATAGCAGGAGGTCATACTATTGAGGACGAAGAACCTAAATACGGTTTGAGCGTCACAGGAATTGTGCATCCTGAGAAGG
TGATAAAAAATTCTACTGCTAAGCCGGGAGATGTGCTGATTCTCACGAAGCCCTTGGGAATTGGTGTTATAAATACTGCC
ATAAAAGGAGAGATGTGCCCATCTGAAACATATTTATTGGCAGTGGAAGTTATGAAGTATTTAAATAAAGAGGCTTCTGA
AATAATGAAGGAAGTTGGAGTTAATGCCTGTACTGATATAACAGGATTTGGACTTTTGGGACATGCCTATGAGATGGCTT
TTTCCAGCGGTGTTACTATTGAATTTGATAAAGATTCTATTCCTTTGATTGAAGGGGCGAGAGAATTGGCTCAAATGGGG
TTAATCCCTGGGGGATGTTACAGGAATAAAAAGTATTTAAAAGGAAAAGTTTGCATAAAGGTGGAAGAGGACGAGGTCAT
TGACCTTATGTTTGATCCCCAAACTTCAGGAGGATTGTTAATATCAGTGTCAGAAGAGAAAGCAGAAGAACTTTATCGAA
GGCTTAATAAAAAGTTAAAATTTGGAGCTTTTATTGTAGGAAGGGTGAAAGAAAAACAAGAATATGATATTTATGTCAGA
TAA

Upstream 100 bases:

>100_bases
TTATAATAACAGAAAGGAGGTATCAGTTGTGATAGAAAAAATAAAACTTACACAATTTACAAAAAGCGCTGGTTGAGCAG
CCAAGATTGGCCCTGAGGCC

Downstream 100 bases:

>100_bases
CTCCGGCGAGAGGAGCTGTGCTATGGAGGACTTGTACAGAAAACTTCCGTCAGTAGATGAGATACTTAGGGAAGAAAAAA
TAAATGAGGTTTTGAAATTT

Product: selenophosphate synthase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MAQVLCQLEITWNENLLVGLNTNDDAAVYRLNEDIAIVHTVDYFTPVVDDPYDFGQIAAANALSDVYAMGAVPLFALNVV
CFPAAYIDVLKEVLRGGNDKVKEAGALIAGGHTIEDEEPKYGLSVTGIVHPEKVIKNSTAKPGDVLILTKPLGIGVINTA
IKGEMCPSETYLLAVEVMKYLNKEASEIMKEVGVNACTDITGFGLLGHAYEMAFSSGVTIEFDKDSIPLIEGARELAQMG
LIPGGCYRNKKYLKGKVCIKVEEDEVIDLMFDPQTSGGLLISVSEEKAEELYRRLNKKLKFGAFIVGRVKEKQEYDIYVR

Sequences:

>Translated_320_residues
MAQVLCQLEITWNENLLVGLNTNDDAAVYRLNEDIAIVHTVDYFTPVVDDPYDFGQIAAANALSDVYAMGAVPLFALNVV
CFPAAYIDVLKEVLRGGNDKVKEAGALIAGGHTIEDEEPKYGLSVTGIVHPEKVIKNSTAKPGDVLILTKPLGIGVINTA
IKGEMCPSETYLLAVEVMKYLNKEASEIMKEVGVNACTDITGFGLLGHAYEMAFSSGVTIEFDKDSIPLIEGARELAQMG
LIPGGCYRNKKYLKGKVCIKVEEDEVIDLMFDPQTSGGLLISVSEEKAEELYRRLNKKLKFGAFIVGRVKEKQEYDIYVR
>Mature_319_residues
AQVLCQLEITWNENLLVGLNTNDDAAVYRLNEDIAIVHTVDYFTPVVDDPYDFGQIAAANALSDVYAMGAVPLFALNVVC
FPAAYIDVLKEVLRGGNDKVKEAGALIAGGHTIEDEEPKYGLSVTGIVHPEKVIKNSTAKPGDVLILTKPLGIGVINTAI
KGEMCPSETYLLAVEVMKYLNKEASEIMKEVGVNACTDITGFGLLGHAYEMAFSSGVTIEFDKDSIPLIEGARELAQMGL
IPGGCYRNKKYLKGKVCIKVEEDEVIDLMFDPQTSGGLLISVSEEKAEELYRRLNKKLKFGAFIVGRVKEKQEYDIYVR

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=302, Percent_Identity=31.1258278145695, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI15011844, Length=313, Percent_Identity=29.7124600638978, Blast_Score=108, Evalue=4e-24,
Organism=Escherichia coli, GI1788062, Length=284, Percent_Identity=45.7746478873239, Blast_Score=238, Evalue=4e-64,
Organism=Caenorhabditis elegans, GI17543426, Length=336, Percent_Identity=33.0357142857143, Blast_Score=137, Evalue=8e-33,
Organism=Drosophila melanogaster, GI24653602, Length=298, Percent_Identity=31.2080536912752, Blast_Score=131, Evalue=5e-31,
Organism=Drosophila melanogaster, GI24653604, Length=298, Percent_Identity=31.2080536912752, Blast_Score=131, Evalue=5e-31,
Organism=Drosophila melanogaster, GI28574119, Length=338, Percent_Identity=28.4023668639053, Blast_Score=114, Evalue=6e-26,
Organism=Drosophila melanogaster, GI28574118, Length=227, Percent_Identity=33.4801762114537, Blast_Score=104, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 35024; Mature: 34893

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVLCQLEITWNENLLVGLNTNDDAAVYRLNEDIAIVHTVDYFTPVVDDPYDFGQIAAA
CCCEEEEEEEEECCCEEEEECCCCCEEEEEECCCEEEEEEECHHCCCCCCCCCCHHHHHH
NALSDVYAMGAVPLFALNVVCFPAAYIDVLKEVLRGGNDKVKEAGALIAGGHTIEDEEPK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEECCCCCCCCCCC
YGLSVTGIVHPEKVIKNSTAKPGDVLILTKPLGIGVINTAIKGEMCPSETYLLAVEVMKY
CCEEEEEEECHHHHHHCCCCCCCCEEEEECCCCCEEEHHHHCCCCCCCCHHHHHHHHHHH
LNKEASEIMKEVGVNACTDITGFGLLGHAYEMAFSSGVTIEFDKDSIPLIEGARELAQMG
HCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHC
LIPGGCYRNKKYLKGKVCIKVEEDEVIDLMFDPQTSGGLLISVSEEKAEELYRRLNKKLK
CCCCCCCCCCCEECCEEEEEECCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHC
FGAFIVGRVKEKQEYDIYVR
CCEEEEEECCCCCCCEEEEC
>Mature Secondary Structure 
AQVLCQLEITWNENLLVGLNTNDDAAVYRLNEDIAIVHTVDYFTPVVDDPYDFGQIAAA
CCEEEEEEEEECCCEEEEECCCCCEEEEEECCCEEEEEEECHHCCCCCCCCCCHHHHHH
NALSDVYAMGAVPLFALNVVCFPAAYIDVLKEVLRGGNDKVKEAGALIAGGHTIEDEEPK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCEEECCCCCCCCCCC
YGLSVTGIVHPEKVIKNSTAKPGDVLILTKPLGIGVINTAIKGEMCPSETYLLAVEVMKY
CCEEEEEEECHHHHHHCCCCCCCCEEEEECCCCCEEEHHHHCCCCCCCCHHHHHHHHHHH
LNKEASEIMKEVGVNACTDITGFGLLGHAYEMAFSSGVTIEFDKDSIPLIEGARELAQMG
HCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHC
LIPGGCYRNKKYLKGKVCIKVEEDEVIDLMFDPQTSGGLLISVSEEKAEELYRRLNKKLK
CCCCCCCCCCCEECCEEEEEECCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHC
FGAFIVGRVKEKQEYDIYVR
CCEEEEEECCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]