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The map label for this gene is 20808097

Identifier: 20808097

GI number: 20808097

Start: 1619272

End: 1619544

Strand: Reverse

Name: 20808097

Synonym: TTE1671

Alternate gene names: NA

Gene position: 1619544-1619272 (Counterclockwise)

Preceding gene: 20808098

Following gene: 20808096

Centisome position: 60.22

GC content: 33.7

Gene sequence:

>273_bases
ATGAAGGATTTTATTTCCTTTATGGAAAAGGCGTGGTGGAGATACATTACAGAAGGTATATTGGAGGAAGGGATTAGGGA
AGAAATAAAAGAGTCTTGGAAGTTATGCAGAGAATATGGAGTGGACCCTTTTGGAGGGGTGGGAGAGATATTAGATGAAA
AAAGTATGAAAGTAAGATTAAAAGAAAATGAAGAGTTGATCTCTGTTGCCCATCCTATAATGGAGGATAAAACAGTTGGA
ATTAATAATAATAAAAAAATGATACAACTTTAA

Upstream 100 bases:

>100_bases
TGAGTTTAGCAAGAGGATGAGTTATTTGTGGTAAAGAAAAAGCAGCTTTCAAAATGGGCTTTTAATGAAGGCTGCTTTTT
TTGTAAAAAGGGGGATTTGA

Downstream 100 bases:

>100_bases
TTAGGTGATGATGAATGTTATTAACTATAAAAAAGTTAAAGAGCTGTATGATATAAGCAGGATTACTTTAATAAACTAGG
AAAAAGAAGGATTAATAACC

Product: hypothetical protein

Products: NA

Alternate protein names: Sigma-54 Interaction Domain Family Protein; Fis Family GAF Modulated

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MKDFISFMEKAWWRYITEGILEEGIREEIKESWKLCREYGVDPFGGVGEILDEKSMKVRLKENEELISVAHPIMEDKTVG
INNNKKMIQL

Sequences:

>Translated_90_residues
MKDFISFMEKAWWRYITEGILEEGIREEIKESWKLCREYGVDPFGGVGEILDEKSMKVRLKENEELISVAHPIMEDKTVG
INNNKKMIQL
>Mature_90_residues
MKDFISFMEKAWWRYITEGILEEGIREEIKESWKLCREYGVDPFGGVGEILDEKSMKVRLKENEELISVAHPIMEDKTVG
INNNKKMIQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10592; Mature: 10592

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDFISFMEKAWWRYITEGILEEGIREEIKESWKLCREYGVDPFGGVGEILDEKSMKVRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEHC
KENEELISVAHPIMEDKTVGINNNKKMIQL
CCCHHHHHHHHHHHCCCCCCCCCCCCEECC
>Mature Secondary Structure
MKDFISFMEKAWWRYITEGILEEGIREEIKESWKLCREYGVDPFGGVGEILDEKSMKVRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEHC
KENEELISVAHPIMEDKTVGINNNKKMIQL
CCCHHHHHHHHHHHCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA