Definition Thermoanaerobacter tengcongensis MB4, complete genome.
Accession NC_003869
Length 2,689,445

Click here to switch to the map view.

The map label for this gene is ylxW [H]

Identifier: 20808069

GI number: 20808069

Start: 1591533

End: 1592261

Strand: Reverse

Name: ylxW [H]

Synonym: TTE1642

Alternate gene names: 20808069

Gene position: 1592261-1591533 (Counterclockwise)

Preceding gene: 20808070

Following gene: 20808068

Centisome position: 59.2

GC content: 40.19

Gene sequence:

>729_bases
ATGAAAAAAGGTTTTAGTATATATATATCGATTGCGCTGGTTTCTCTTGTGTTGGGCATAATGCTTTCTACACAATTTAA
GATTGTAAAAAAAGGTGGAGTTGTGACAGCTCAGAGGGCAGAGGAGCTTGCTACTCAATTAAAGCAATTGCAATCTGAGA
AAGAAGCCTTGTTGAAACAAATAAGCGAATTGGAAGCCAAAATAAATGCGTATGAGGACTCGGCTTCTAAAAACAGTGTG
ATTACACAGACTTTAAAGAGTGAAGTTGAAAAGTACAAAGAGCTGGCTGGGCTTACAGACCTTCAGGGACCAGGGGTCAT
TGTCACGGTAAATGACAGCAAGCAGCCTGTTCCACCTGGACAGGACCCGAATTTGTTTTTAGTGCATGATGAGGACTTAT
TGAGGATTGTAAATGAGTTAAGAGCAGCAGGAGCTGAAGCCATTTCTTTAAATGACCAGAGGCTCATTGCAACTTCAGAG
ATAAGATGTGTTGGACCTACTGTGGTAGTAAATTCTGTGCGATTTGCTGCTCCATATGTGATAAAGGCTATAGGAGACCC
TGATACTTTAGAAGCAGCCTTGAAATTGAAAGGCGGAGTTGTAGATAGCCTAGCTACATGGGGAATAGAAGTAAATATAA
AGAAGTCAGACAAGATAGTCATAAAAAAGTACGATGGCGTATTGAAATTTAGATATGCGAAACCATTGGTTGAGGGAGAG
AAGAAGTAA

Upstream 100 bases:

>100_bases
AATATTAAAGGATTTGCTTAAAAAGGGTTACAAAAGTGGTAAGATAGAAATTATAGGAGATGGCAATGCCGTATTTATGC
AATAGAGGATGGGGGTACGT

Downstream 100 bases:

>100_bases
TGGCATATATAATAGCTTTGAGCTTGTTGCTTGGACTTATAATAGGTTTTGTACTTCCCATTAACATACCTTTTAGCTAT
GCTCCTTACCTTTCTGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKKGFSIYISIALVSLVLGIMLSTQFKIVKKGGVVTAQRAEELATQLKQLQSEKEALLKQISELEAKINAYEDSASKNSV
ITQTLKSEVEKYKELAGLTDLQGPGVIVTVNDSKQPVPPGQDPNLFLVHDEDLLRIVNELRAAGAEAISLNDQRLIATSE
IRCVGPTVVVNSVRFAAPYVIKAIGDPDTLEAALKLKGGVVDSLATWGIEVNIKKSDKIVIKKYDGVLKFRYAKPLVEGE
KK

Sequences:

>Translated_242_residues
MKKGFSIYISIALVSLVLGIMLSTQFKIVKKGGVVTAQRAEELATQLKQLQSEKEALLKQISELEAKINAYEDSASKNSV
ITQTLKSEVEKYKELAGLTDLQGPGVIVTVNDSKQPVPPGQDPNLFLVHDEDLLRIVNELRAAGAEAISLNDQRLIATSE
IRCVGPTVVVNSVRFAAPYVIKAIGDPDTLEAALKLKGGVVDSLATWGIEVNIKKSDKIVIKKYDGVLKFRYAKPLVEGE
KK
>Mature_242_residues
MKKGFSIYISIALVSLVLGIMLSTQFKIVKKGGVVTAQRAEELATQLKQLQSEKEALLKQISELEAKINAYEDSASKNSV
ITQTLKSEVEKYKELAGLTDLQGPGVIVTVNDSKQPVPPGQDPNLFLVHDEDLLRIVNELRAAGAEAISLNDQRLIATSE
IRCVGPTVVVNSVRFAAPYVIKAIGDPDTLEAALKLKGGVVDSLATWGIEVNIKKSDKIVIKKYDGVLKFRYAKPLVEGE
KK

Specific function: May be involved in cell division and sporulation [H]

COG id: COG3879

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0749 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010273 [H]

Pfam domain/function: PF05949 DUF881 [H]

EC number: NA

Molecular weight: Translated: 26344; Mature: 26344

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGFSIYISIALVSLVLGIMLSTQFKIVKKGGVVTAQRAEELATQLKQLQSEKEALLKQ
CCCCCEEEHHHHHHHHHHHHHHHHHHEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
ISELEAKINAYEDSASKNSVITQTLKSEVEKYKELAGLTDLQGPGVIVTVNDSKQPVPPG
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC
QDPNLFLVHDEDLLRIVNELRAAGAEAISLNDQRLIATSEIRCVGPTVVVNSVRFAAPYV
CCCCEEEEECHHHHHHHHHHHHCCCCEEECCCCEEEEECCEEECCCHHHECCHHHHCCEE
IKAIGDPDTLEAALKLKGGVVDSLATWGIEVNIKKSDKIVIKKYDGVLKFRYAKPLVEGE
EEECCCCHHHHHHHHHCCCHHHHHHHCCEEEEEECCCEEEEEECCCEEEEEHHCCCCCCC
KK
CC
>Mature Secondary Structure
MKKGFSIYISIALVSLVLGIMLSTQFKIVKKGGVVTAQRAEELATQLKQLQSEKEALLKQ
CCCCCEEEHHHHHHHHHHHHHHHHHHEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
ISELEAKINAYEDSASKNSVITQTLKSEVEKYKELAGLTDLQGPGVIVTVNDSKQPVPPG
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC
QDPNLFLVHDEDLLRIVNELRAAGAEAISLNDQRLIATSEIRCVGPTVVVNSVRFAAPYV
CCCCEEEEECHHHHHHHHHHHHCCCCEEECCCCEEEEECCEEECCCHHHECCHHHHCCEE
IKAIGDPDTLEAALKLKGGVVDSLATWGIEVNIKKSDKIVIKKYDGVLKFRYAKPLVEGE
EEECCCCHHHHHHHHHCCCHHHHHHHCCEEEEEECCCEEEEEECCCEEEEEHHCCCCCCC
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2556375; 9384377; 12207695 [H]