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The map label for this gene is sbp [H]

Identifier: 20808068

GI number: 20808068

Start: 1591189

End: 1591533

Strand: Reverse

Name: sbp [H]

Synonym: TTE1641

Alternate gene names: 20808068

Gene position: 1591533-1591189 (Counterclockwise)

Preceding gene: 20808069

Following gene: 20808067

Centisome position: 59.18

GC content: 39.13

Gene sequence:

>345_bases
ATGGCATATATAATAGCTTTGAGCTTGTTGCTTGGACTTATAATAGGTTTTGTACTTCCCATTAACATACCTTTTAGCTA
TGCTCCTTACCTTTCTGTGGCAATTCTTGCAGCTTTGGATTCGGTCTTTGGAGGGATAAGGGCAAGTTTTGAAGAAAAGT
TTGACAACCTAATTTTTATCACAGGATTTTTTGGCAATATAATTTTAGCTGGAGGGCTCGCGTATATTGGAGATGTTTTG
GGAGTTCCTATCTATCTAGCAGCTGTGTTTGTGTTTGGAAGCAGGCTTTTCTCAAACTTTGCCTACATAAGAAGGTATTT
GATAGACAGGATGCGGCGAAGGTAG

Upstream 100 bases:

>100_bases
AAGTAAATATAAAGAAGTCAGACAAGATAGTCATAAAAAAGTACGATGGCGTATTGAAATTTAGATATGCGAAACCATTG
GTTGAGGGAGAGAAGAAGTA

Downstream 100 bases:

>100_bases
TGGGCTTTTAAGGAGGATTTTCAAATGGGAGATTTGATAGTAGGTTTGGACATTGGCACGTCTAAGGTATGCACAATCAT
TGGGGAAGGGGATAAGACGG

Product: small basic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MAYIIALSLLLGLIIGFVLPINIPFSYAPYLSVAILAALDSVFGGIRASFEEKFDNLIFITGFFGNIILAGGLAYIGDVL
GVPIYLAAVFVFGSRLFSNFAYIRRYLIDRMRRR

Sequences:

>Translated_114_residues
MAYIIALSLLLGLIIGFVLPINIPFSYAPYLSVAILAALDSVFGGIRASFEEKFDNLIFITGFFGNIILAGGLAYIGDVL
GVPIYLAAVFVFGSRLFSNFAYIRRYLIDRMRRR
>Mature_113_residues
AYIIALSLLLGLIIGFVLPINIPFSYAPYLSVAILAALDSVFGGIRASFEEKFDNLIFITGFFGNIILAGGLAYIGDVLG
VPIYLAAVFVFGSRLFSNFAYIRRYLIDRMRRR

Specific function: Unknown

COG id: COG3856

COG function: function code S; Uncharacterized conserved protein (small basic protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sbp family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009709 [H]

Pfam domain/function: PF06947 DUF1290 [H]

EC number: NA

Molecular weight: Translated: 12636; Mature: 12505

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYIIALSLLLGLIIGFVLPINIPFSYAPYLSVAILAALDSVFGGIRASFEEKFDNLIFI
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
TGFFGNIILAGGLAYIGDVLGVPIYLAAVFVFGSRLFSNFAYIRRYLIDRMRRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AYIIALSLLLGLIIGFVLPINIPFSYAPYLSVAILAALDSVFGGIRASFEEKFDNLIFI
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
TGFFGNIILAGGLAYIGDVLGVPIYLAAVFVFGSRLFSNFAYIRRYLIDRMRRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3139638; 9384377; 1569582 [H]