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The map label for this gene is DksA [H]

Identifier: 20808001

GI number: 20808001

Start: 1530638

End: 1531258

Strand: Reverse

Name: DksA [H]

Synonym: TTE1572

Alternate gene names: 20808001

Gene position: 1531258-1530638 (Counterclockwise)

Preceding gene: 20808002

Following gene: 20807999

Centisome position: 56.94

GC content: 36.71

Gene sequence:

>621_bases
GTGGATAATGAAAAATTGATGCATTTTAAAAATTTACTTCTTAAGGAGAAAAACAAGGTGTTATCTACCATACACAGGAT
GAACTTAAACGATGGGATAGGGGGAATTGCTCAGAGGGAATACTATCAGGAGCTTTCTCTTTTGGACAATCATCCAGCTG
ATATGGCTTCAGAGGTTTACGAAGTAGAAAAAAATTACGCTTTAAAAGACAATGAAAAAAATATACTGCGCCAGATAGAA
GATGCACTTCAAAAAATAGAAAATGGGAATTATGGAATTTGTGAGAATTGTGGGCAACCCATAGAGGAAGAAAGACTTGA
GGCTATTCCCTATACTACTTTATGCTCCTCCTGTGCAAAAGAAAAGGACTTAAGCTTAAAGGATTTGAAAAATTCAAGAC
CCAATGAGGAAAAAGTCATAAAATACCCCTTTGGATGGGGATATAAGGACAAAAAAGGAGAAATACAGTTTGATGCTGAA
GACACCTTTCAGGAGGTTGCAAGATTTAACAAGACAAGAAGCGGTTCTGACCATTACGAAGAGGTATACGACGAAGAAAA
TGCAGGGTATGTAGAGGAGACGGACAAGATAAGCAACGAAGATTATAAAAAGACTTTGTAA

Upstream 100 bases:

>100_bases
ACAAAAATTAGTTGTATTAAACCTGCCTCTAATAGGGAATATTATAGCTGATATAGTTAAGATTGTACAGCAAAAATTGT
ACTGACAGGAGCTGATTATA

Downstream 100 bases:

>100_bases
AAGGCACTTAAAAAGAGCATAAGTGCCTTTTACTCTCCTATTATTTTTACCAGTACTCTTTTTTTCCTTTTTCCATCAAA
TTCTCCGTAAAAAATTTGTT

Product: DnaK suppressor protein

Products: NA

Alternate protein names: ORFQ [H]

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MDNEKLMHFKNLLLKEKNKVLSTIHRMNLNDGIGGIAQREYYQELSLLDNHPADMASEVYEVEKNYALKDNEKNILRQIE
DALQKIENGNYGICENCGQPIEEERLEAIPYTTLCSSCAKEKDLSLKDLKNSRPNEEKVIKYPFGWGYKDKKGEIQFDAE
DTFQEVARFNKTRSGSDHYEEVYDEENAGYVEETDKISNEDYKKTL

Sequences:

>Translated_206_residues
MDNEKLMHFKNLLLKEKNKVLSTIHRMNLNDGIGGIAQREYYQELSLLDNHPADMASEVYEVEKNYALKDNEKNILRQIE
DALQKIENGNYGICENCGQPIEEERLEAIPYTTLCSSCAKEKDLSLKDLKNSRPNEEKVIKYPFGWGYKDKKGEIQFDAE
DTFQEVARFNKTRSGSDHYEEVYDEENAGYVEETDKISNEDYKKTL
>Mature_206_residues
MDNEKLMHFKNLLLKEKNKVLSTIHRMNLNDGIGGIAQREYYQELSLLDNHPADMASEVYEVEKNYALKDNEKNILRQIE
DALQKIENGNYGICENCGQPIEEERLEAIPYTTLCSSCAKEKDLSLKDLKNSRPNEEKVIKYPFGWGYKDKKGEIQFDAE
DTFQEVARFNKTRSGSDHYEEVYDEENAGYVEETDKISNEDYKKTL

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014240
- InterPro:   IPR000962 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 23967; Mature: 23967

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNEKLMHFKNLLLKEKNKVLSTIHRMNLNDGIGGIAQREYYQELSLLDNHPADMASEVY
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
EVEKNYALKDNEKNILRQIEDALQKIENGNYGICENCGQPIEEERLEAIPYTTLCSSCAK
HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHCCHHHHHHHHHH
EKDLSLKDLKNSRPNEEKVIKYPFGWGYKDKKGEIQFDAEDTFQEVARFNKTRSGSDHYE
HCCCCHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCCHHHH
EVYDEENAGYVEETDKISNEDYKKTL
HHHCCCCCCCCHHHHHCCCCHHHHCC
>Mature Secondary Structure
MDNEKLMHFKNLLLKEKNKVLSTIHRMNLNDGIGGIAQREYYQELSLLDNHPADMASEVY
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
EVEKNYALKDNEKNILRQIEDALQKIENGNYGICENCGQPIEEERLEAIPYTTLCSSCAK
HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHCCHHHHHHHHHH
EKDLSLKDLKNSRPNEEKVIKYPFGWGYKDKKGEIQFDAEDTFQEVARFNKTRSGSDHYE
HCCCCHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCCHHHH
EVYDEENAGYVEETDKISNEDYKKTL
HHHCCCCCCCCHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 10568751 [H]