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The map label for this gene is 20807980

Identifier: 20807980

GI number: 20807980

Start: 1505398

End: 1507335

Strand: Reverse

Name: 20807980

Synonym: TTE1546

Alternate gene names: NA

Gene position: 1507335-1505398 (Counterclockwise)

Preceding gene: 20807981

Following gene: 20807979

Centisome position: 56.05

GC content: 48.71

Gene sequence:

>1938_bases
ATGGCTCGCAACTTCGCTCTTGTAAAAAGCATTGCTGAATTTCAAGGGCTAAGGCCAGAAGAAATTATGAGAGAATTGTA
TAATGGTTTCCAGGAACTTACAGCCGAACAAATGAGTTCTGAGCAAGTTTCGGCCTGGCACGGAGCACTTCCTCACCTGC
AGAAAGCTTTCGCCTTGCTTCCCGACAGAGTCCTGGTCGTTTTAGAGTATACCTTGCCTATGAGCAACGAGCGGATCGAT
GTGGTTCTGCTGGGTTGTTCACCTGAGGGCAAGGCGCAAGCGGTGGTGCTGGAGTTAAAAGGATGGCGGAAAGTGTATTA
TCTCAATAACAGCCTTGATCTCGATAACGACCTTGTCCTGGCAGATGACGAGGTACGCCAACATCCTGAATTGCAGGTAC
TCAACTATGTTGGCAAATTGAATTACAGCCATTCAGCTGCCGACCGGTTCGCCTTTGTCGGGTGCACATGGCTTTATAAC
CTGCCACCCAGAGAGTTGACGTTTAGGAGGGTGGACGCCTTTTGGCAAGGACAGGCGGAGGAGTTCGGACAATACCTTAG
GAACCACCTCGCGGGGCCGGTGAAGGAGGAGGATGCGAAAGCGTTTTTGGAGGGTTACTATATGCAGACACCCCGCTTGC
TGGAAGCCATTCGCAAAAACTTCGATGCCCTACGTCAAGGAGCGATAGATGCACTTTCTGTCAGCGGTTTTGGACCTTCT
GAAGAACAAGTAAAGCTTCTGAATGAAGTGCAAAAAGCGGTAGAAAGTGGCGAGCGAGTTTGTTACCTCGTGCAGGGACA
ACCTGGTTCAGGTAAATCGTATCTGGCTGTTTTGATGCTGTTGAGGAGTTTGAAAAATGTCGGTCAGTTCCACAGTCAAA
ATAATGTGGCTGTTCTTGGCTACCGCAACAATCGTCTTATTAACACACTGCGCAAAGTATTCAGAGAATGTAGCCCTGGT
TTAGATATTGTTTTGAAATTTTACTCTACTGGTAGAGGAAAAAATGGATTAGCCGAAGGTGATCCGCAAAGCCCTCACTT
TTGTTTAGCCATTTACGACGAAGCTCAGAGGATGACTGAGAAAAATATACGCGTTGCTATGCAGCGGGCTGACGTGACCG
TGTTCTTTTATGACGAGGCACAAATCTTAAACGCCGAGGAGGAAGGTTGGACAGAAAACTTTAAGAAAATTGCTGAGGAG
TTGGAAATTGACCTAAGGGAACGAACTCTAAGCGGCATATACCGCGTTCAAGGAGGAGCTGCGTACCACGGATTCGTAGA
AACGGTTCTTACCGACCCAAGTCAAGCAAAGCTACCGGAAGGGTTAAATTACGACTTTCGCGTTTTCACCGACATTCGGG
AAATGCTTGAAACTCTTCGCCAAAAGGCAAACCAAAGTCGGTCCAAAGTAGCTCTTGTCGCCGCCTTTACTGAATCGCCG
GGAGACCGCGAAAAACCTCTAGAGAAGTCATTAAAGAACCGCCGCATTGGTTGTCCACTTTATAGCGGCTTCAACCACTA
CAAGGACACTGGATTGGACATCTACTGGCTGATGGACGAGAAAGAGCAGTATCCTGCCTTCTGGTACGGGGGCCAGTCCA
ACGACCTGACGCACTGTGCTTCGATCTACGGCTGTCAAGGCTTTGAAGCCGATTACGTCGGGGTAGTTTGGGGACGTGAC
TTCTGCTTCCGGAATGCTCAGTGGGAGTTGGGAGAAAACTGCGAAGACAACATTGGACGCCCTAGTCTCAAGCAGCTTTT
TAGCCAGGCTCGGAACGGAGACAGAAAAGCTCGTGTTCTGGCACTCCGCTTGTTGATAAATAGGTATCGTATCTTTTTGA
CCCGCGGTATACATGGCACTTATGTTTATTGTGAAGACGAGGCAACTGCTCGGTTTTTGCGCGAGATAGCGTCTTCGAAA
GGGGGTAGATCCCTGTGA

Upstream 100 bases:

>100_bases
GCGGGAGATTTTAAGCATTATGGAGGAATTAAGTGAATTGTTAGAAAACGAGAAAGGCAACTCTAGCCGGAAGAACGACG
AAGAGGAGGAATAAGAAAGA

Downstream 100 bases:

>100_bases
CAGAGGGACCGTACAAGCTTCCCCCCGGCTGGCGCTGGGTGAGGTTGGGGGAGGTGTGTCTTCCTACCGAAAGGCGGGAT
CCTACCAAGAACCCTTCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: DEAD-Like Helicase Domain Fused Conserved Domain; Replication Factor C

Number of amino acids: Translated: 645; Mature: 644

Protein sequence:

>645_residues
MARNFALVKSIAEFQGLRPEEIMRELYNGFQELTAEQMSSEQVSAWHGALPHLQKAFALLPDRVLVVLEYTLPMSNERID
VVLLGCSPEGKAQAVVLELKGWRKVYYLNNSLDLDNDLVLADDEVRQHPELQVLNYVGKLNYSHSAADRFAFVGCTWLYN
LPPRELTFRRVDAFWQGQAEEFGQYLRNHLAGPVKEEDAKAFLEGYYMQTPRLLEAIRKNFDALRQGAIDALSVSGFGPS
EEQVKLLNEVQKAVESGERVCYLVQGQPGSGKSYLAVLMLLRSLKNVGQFHSQNNVAVLGYRNNRLINTLRKVFRECSPG
LDIVLKFYSTGRGKNGLAEGDPQSPHFCLAIYDEAQRMTEKNIRVAMQRADVTVFFYDEAQILNAEEEGWTENFKKIAEE
LEIDLRERTLSGIYRVQGGAAYHGFVETVLTDPSQAKLPEGLNYDFRVFTDIREMLETLRQKANQSRSKVALVAAFTESP
GDREKPLEKSLKNRRIGCPLYSGFNHYKDTGLDIYWLMDEKEQYPAFWYGGQSNDLTHCASIYGCQGFEADYVGVVWGRD
FCFRNAQWELGENCEDNIGRPSLKQLFSQARNGDRKARVLALRLLINRYRIFLTRGIHGTYVYCEDEATARFLREIASSK
GGRSL

Sequences:

>Translated_645_residues
MARNFALVKSIAEFQGLRPEEIMRELYNGFQELTAEQMSSEQVSAWHGALPHLQKAFALLPDRVLVVLEYTLPMSNERID
VVLLGCSPEGKAQAVVLELKGWRKVYYLNNSLDLDNDLVLADDEVRQHPELQVLNYVGKLNYSHSAADRFAFVGCTWLYN
LPPRELTFRRVDAFWQGQAEEFGQYLRNHLAGPVKEEDAKAFLEGYYMQTPRLLEAIRKNFDALRQGAIDALSVSGFGPS
EEQVKLLNEVQKAVESGERVCYLVQGQPGSGKSYLAVLMLLRSLKNVGQFHSQNNVAVLGYRNNRLINTLRKVFRECSPG
LDIVLKFYSTGRGKNGLAEGDPQSPHFCLAIYDEAQRMTEKNIRVAMQRADVTVFFYDEAQILNAEEEGWTENFKKIAEE
LEIDLRERTLSGIYRVQGGAAYHGFVETVLTDPSQAKLPEGLNYDFRVFTDIREMLETLRQKANQSRSKVALVAAFTESP
GDREKPLEKSLKNRRIGCPLYSGFNHYKDTGLDIYWLMDEKEQYPAFWYGGQSNDLTHCASIYGCQGFEADYVGVVWGRD
FCFRNAQWELGENCEDNIGRPSLKQLFSQARNGDRKARVLALRLLINRYRIFLTRGIHGTYVYCEDEATARFLREIASSK
GGRSL
>Mature_644_residues
ARNFALVKSIAEFQGLRPEEIMRELYNGFQELTAEQMSSEQVSAWHGALPHLQKAFALLPDRVLVVLEYTLPMSNERIDV
VLLGCSPEGKAQAVVLELKGWRKVYYLNNSLDLDNDLVLADDEVRQHPELQVLNYVGKLNYSHSAADRFAFVGCTWLYNL
PPRELTFRRVDAFWQGQAEEFGQYLRNHLAGPVKEEDAKAFLEGYYMQTPRLLEAIRKNFDALRQGAIDALSVSGFGPSE
EQVKLLNEVQKAVESGERVCYLVQGQPGSGKSYLAVLMLLRSLKNVGQFHSQNNVAVLGYRNNRLINTLRKVFRECSPGL
DIVLKFYSTGRGKNGLAEGDPQSPHFCLAIYDEAQRMTEKNIRVAMQRADVTVFFYDEAQILNAEEEGWTENFKKIAEEL
EIDLRERTLSGIYRVQGGAAYHGFVETVLTDPSQAKLPEGLNYDFRVFTDIREMLETLRQKANQSRSKVALVAAFTESPG
DREKPLEKSLKNRRIGCPLYSGFNHYKDTGLDIYWLMDEKEQYPAFWYGGQSNDLTHCASIYGCQGFEADYVGVVWGRDF
CFRNAQWELGENCEDNIGRPSLKQLFSQARNGDRKARVLALRLLINRYRIFLTRGIHGTYVYCEDEATARFLREIASSKG
GRSL

Specific function: Unknown

COG id: COG3410

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73473; Mature: 73342

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARNFALVKSIAEFQGLRPEEIMRELYNGFQELTAEQMSSEQVSAWHGALPHLQKAFALL
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHC
PDRVLVVLEYTLPMSNERIDVVLLGCSPEGKAQAVVLELKGWRKVYYLNNSLDLDNDLVL
CCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCCEEE
ADDEVRQHPELQVLNYVGKLNYSHSAADRFAFVGCTWLYNLPPRELTFRRVDAFWQGQAE
ECHHHHHCCCHHHHHHHHHCCCCCHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHCCCHH
EFGQYLRNHLAGPVKEEDAKAFLEGYYMQTPRLLEAIRKNFDALRQGAIDALSVSGFGPS
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
EEQVKLLNEVQKAVESGERVCYLVQGQPGSGKSYLAVLMLLRSLKNVGQFHSQNNVAVLG
HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
YRNNRLINTLRKVFRECSPGLDIVLKFYSTGRGKNGLAEGDPQSPHFCLAIYDEAQRMTE
ECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHH
KNIRVAMQRADVTVFFYDEAQILNAEEEGWTENFKKIAEELEIDLRERTLSGIYRVQGGA
HHHHHEEEECCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
AYHGFVETVLTDPSQAKLPEGLNYDFRVFTDIREMLETLRQKANQSRSKVALVAAFTESP
HHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCC
GDREKPLEKSLKNRRIGCPLYSGFNHYKDTGLDIYWLMDEKEQYPAFWYGGQSNDLTHCA
CCCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCHHHHH
SIYGCQGFEADYVGVVWGRDFCFRNAQWELGENCEDNIGRPSLKQLFSQARNGDRKARVL
HHHCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH
ALRLLINRYRIFLTRGIHGTYVYCEDEATARFLREIASSKGGRSL
HHHHHHHHHHHEEEECCCCEEEEECCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ARNFALVKSIAEFQGLRPEEIMRELYNGFQELTAEQMSSEQVSAWHGALPHLQKAFALL
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHC
PDRVLVVLEYTLPMSNERIDVVLLGCSPEGKAQAVVLELKGWRKVYYLNNSLDLDNDLVL
CCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCCEEE
ADDEVRQHPELQVLNYVGKLNYSHSAADRFAFVGCTWLYNLPPRELTFRRVDAFWQGQAE
ECHHHHHCCCHHHHHHHHHCCCCCHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHCCCHH
EFGQYLRNHLAGPVKEEDAKAFLEGYYMQTPRLLEAIRKNFDALRQGAIDALSVSGFGPS
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
EEQVKLLNEVQKAVESGERVCYLVQGQPGSGKSYLAVLMLLRSLKNVGQFHSQNNVAVLG
HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
YRNNRLINTLRKVFRECSPGLDIVLKFYSTGRGKNGLAEGDPQSPHFCLAIYDEAQRMTE
ECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHH
KNIRVAMQRADVTVFFYDEAQILNAEEEGWTENFKKIAEELEIDLRERTLSGIYRVQGGA
HHHHHEEEECCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
AYHGFVETVLTDPSQAKLPEGLNYDFRVFTDIREMLETLRQKANQSRSKVALVAAFTESP
HHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCC
GDREKPLEKSLKNRRIGCPLYSGFNHYKDTGLDIYWLMDEKEQYPAFWYGGQSNDLTHCA
CCCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCHHHHH
SIYGCQGFEADYVGVVWGRDFCFRNAQWELGENCEDNIGRPSLKQLFSQARNGDRKARVL
HHHCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH
ALRLLINRYRIFLTRGIHGTYVYCEDEATARFLREIASSKGGRSL
HHHHHHHHHHHEEEECCCCEEEEECCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA