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The map label for this gene is yloC [H]

Identifier: 20807955

GI number: 20807955

Start: 1477659

End: 1478531

Strand: Reverse

Name: yloC [H]

Synonym: TTE1513

Alternate gene names: 20807955

Gene position: 1478531-1477659 (Counterclockwise)

Preceding gene: 20807956

Following gene: 20807954

Centisome position: 54.98

GC content: 35.85

Gene sequence:

>873_bases
ATGATAAAGAGCATGACGGGGTATGGACGAAGCGACATTCGAGATAGAGGATATGAAATTTCAGTCGAGATAAGGTCATT
AAACCACAGGTTTTTAGACGTAAACATAAAGCTTAATAGACTGTTGAGCGGTTTGGAGGAAAGAGTGAGAGAGTTTGTAT
CAGAAAAGATAAAAAGGGGGAGGGTAGATTTAAGTATAAGTTTTGACGTATACGATAAGACTTTAAGCTTTATAAAAATT
GACGAGCCATTATTAGAAGAATATTTAAAGACTTTTTCTGAAGTAAAAGCAAAATTTGATTTGGAAGGTTCTATAACTGT
AAGCGATTTGATTGACCTTCCAGAGGTAATAAAATTAGAAAATGAAGAAGTTAATTTGGAGGAAGTCTGGGAAATTTTAA
GGATTGCTTTAGATGATGCTATAGGTAAACTGATTGACATGAGGTTAAAAGAAGGTATAAAATTATACGATGATGTGACG
AAGAGGATAGAAAAAGTCTCAGAAATTGTAGGTGAAATAGAAGGTTTAAGTCTGGTGATGGTGGAAGACTACAGAAAAAA
GCTTGAACAGAGGATAAAGGAGTTGGGAGTGGAGGTGGACCCAGTAAGAATCTCTATGGAAGTGGCGTTAATTGCCGATA
AGTCCTGTATTGCGGAAGAGATTACGAGGTTGAAAAGCCATATTAGTCAGTTTAGGTCATCCCTTAATGAGGAGGGACCT
ATCGGTAAAAAATTAGATTTTATACTGCAGGAGATGAACAGGGAAGCTAACACAATAGCTTCCAAGGCAATAGACTACAG
GATTTCCAGCAAAGTTATCGATTTGAAAGATGAGATTGAAAAAATTAGAGAACAAGTTCAAAATATAGAGTAG

Upstream 100 bases:

>100_bases
CTATTTAAGCGGAGAAGTAGAAGAAGTCTTCAGGGGAGAAATTGAAATTTGAGTTTTACGTTGTTTGAAATTTGACTATA
ATAAGAAAAAGGTGGTTTTG

Downstream 100 bases:

>100_bases
GGAGGAAGGAGTATGTCGATTAAATTGATAAATATAGGATTTGGCAACATAATATCGGCTAACCGATTAGTAGCAATTGT
AAGCCCAGAATCTGCTCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MIKSMTGYGRSDIRDRGYEISVEIRSLNHRFLDVNIKLNRLLSGLEERVREFVSEKIKRGRVDLSISFDVYDKTLSFIKI
DEPLLEEYLKTFSEVKAKFDLEGSITVSDLIDLPEVIKLENEEVNLEEVWEILRIALDDAIGKLIDMRLKEGIKLYDDVT
KRIEKVSEIVGEIEGLSLVMVEDYRKKLEQRIKELGVEVDPVRISMEVALIADKSCIAEEITRLKSHISQFRSSLNEEGP
IGKKLDFILQEMNREANTIASKAIDYRISSKVIDLKDEIEKIREQVQNIE

Sequences:

>Translated_290_residues
MIKSMTGYGRSDIRDRGYEISVEIRSLNHRFLDVNIKLNRLLSGLEERVREFVSEKIKRGRVDLSISFDVYDKTLSFIKI
DEPLLEEYLKTFSEVKAKFDLEGSITVSDLIDLPEVIKLENEEVNLEEVWEILRIALDDAIGKLIDMRLKEGIKLYDDVT
KRIEKVSEIVGEIEGLSLVMVEDYRKKLEQRIKELGVEVDPVRISMEVALIADKSCIAEEITRLKSHISQFRSSLNEEGP
IGKKLDFILQEMNREANTIASKAIDYRISSKVIDLKDEIEKIREQVQNIE
>Mature_290_residues
MIKSMTGYGRSDIRDRGYEISVEIRSLNHRFLDVNIKLNRLLSGLEERVREFVSEKIKRGRVDLSISFDVYDKTLSFIKI
DEPLLEEYLKTFSEVKAKFDLEGSITVSDLIDLPEVIKLENEEVNLEEVWEILRIALDDAIGKLIDMRLKEGIKLYDDVT
KRIEKVSEIVGEIEGLSLVMVEDYRKKLEQRIKELGVEVDPVRISMEVALIADKSCIAEEITRLKSHISQFRSSLNEEGP
IGKKLDFILQEMNREANTIASKAIDYRISSKVIDLKDEIEKIREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=290, Percent_Identity=30.6896551724138, Blast_Score=139, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33537; Mature: 33537

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSMTGYGRSDIRDRGYEISVEIRSLNHRFLDVNIKLNRLLSGLEERVREFVSEKIKRG
CCCCCCCCCCCHHHCCCCEEEEEEEECCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC
RVDLSISFDVYDKTLSFIKIDEPLLEEYLKTFSEVKAKFDLEGSITVSDLIDLPEVIKLE
CEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCHHHHHCC
NEEVNLEEVWEILRIALDDAIGKLIDMRLKEGIKLYDDVTKRIEKVSEIVGEIEGLSLVM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEH
VEDYRKKLEQRIKELGVEVDPVRISMEVALIADKSCIAEEITRLKSHISQFRSSLNEEGP
HHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCC
IGKKLDFILQEMNREANTIASKAIDYRISSKVIDLKDEIEKIREQVQNIE
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKSMTGYGRSDIRDRGYEISVEIRSLNHRFLDVNIKLNRLLSGLEERVREFVSEKIKRG
CCCCCCCCCCCHHHCCCCEEEEEEEECCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC
RVDLSISFDVYDKTLSFIKIDEPLLEEYLKTFSEVKAKFDLEGSITVSDLIDLPEVIKLE
CEEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCHHHHHCC
NEEVNLEEVWEILRIALDDAIGKLIDMRLKEGIKLYDDVTKRIEKVSEIVGEIEGLSLVM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEH
VEDYRKKLEQRIKELGVEVDPVRISMEVALIADKSCIAEEITRLKSHISQFRSSLNEEGP
HHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCC
IGKKLDFILQEMNREANTIASKAIDYRISSKVIDLKDEIEKIREQVQNIE
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]