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The map label for this gene is 20807907

Identifier: 20807907

GI number: 20807907

Start: 1433348

End: 1433575

Strand: Reverse

Name: 20807907

Synonym: TTE1460

Alternate gene names: NA

Gene position: 1433575-1433348 (Counterclockwise)

Preceding gene: 20807908

Following gene: 20807906

Centisome position: 53.3

GC content: 41.23

Gene sequence:

>228_bases
ATGGGAGAACTGGTTAAAACTATAGCTAAAGCATTAGTCGACAACCCGGATGCAGTAGAAGTCAACGAAATCCATGGGCA
TCAGTCTATAATAATAGAACTTAAAGTCGCTCCAGAAGACATGGGCAAAGTCATTGGAAAACAGGGAAGAATTGCGCAGG
CTATAAGGACTTTGGTTAAAGCTGCTGCCCTAAAGGAGAAAAAGCGTGTGATTGTTGAGATAATTTAG

Upstream 100 bases:

>100_bases
TGGTTAAGTGTTGGTGCCCAGCCTTCGGATACAGTTAAATCTCTATTTAGAAAAGAAGGTATAATCAATAATTAATCCTC
GTCAATGAGGAGGTGTAAAA

Downstream 100 bases:

>100_bases
GTGATAGTATGGCTGACTACTACAATGTGGGGAAAGTTACTTCTCCCCACGGAATAAGAGGGGAAATAAAAGTATATCCC
CTTACCAATGTGCCTGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MGELVKTIAKALVDNPDAVEVNEIHGHQSIIIELKVAPEDMGKVIGKQGRIAQAIRTLVKAAALKEKKRVIVEII

Sequences:

>Translated_75_residues
MGELVKTIAKALVDNPDAVEVNEIHGHQSIIIELKVAPEDMGKVIGKQGRIAQAIRTLVKAAALKEKKRVIVEII
>Mature_74_residues
GELVKTIAKALVDNPDAVEVNEIHGHQSIIIELKVAPEDMGKVIGKQGRIAQAIRTLVKAAALKEKKRVIVEII

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1460_THETN (Q8R9X2)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_623078.1
- GeneID:   998023
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE1460
- NMPDR:   fig|273068.3.peg.1425
- HOGENOM:   HBG668070
- OMA:   QGRIARA
- ProtClustDB:   PRK00468
- BioCyc:   TTEN273068:TTE1460-MONOMER
- HAMAP:   MF_00088
- InterPro:   IPR009019
- InterPro:   IPR020627

Pfam domain/function: SSF54814 KH_prok

EC number: NA

Molecular weight: Translated: 8150; Mature: 8019

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGELVKTIAKALVDNPDAVEVNEIHGHQSIIIELKVAPEDMGKVIGKQGRIAQAIRTLVK
CCHHHHHHHHHHCCCCCCEEHHCCCCCEEEEEEEEECHHHHHHHHCCCCHHHHHHHHHHH
AAALKEKKRVIVEII
HHHHHHHHHEEEEEC
>Mature Secondary Structure 
GELVKTIAKALVDNPDAVEVNEIHGHQSIIIELKVAPEDMGKVIGKQGRIAQAIRTLVK
CHHHHHHHHHHCCCCCCEEHHCCCCCEEEEEEEEECHHHHHHHHCCCCHHHHHHHHHHH
AAALKEKKRVIVEII
HHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336