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The map label for this gene is RecJ [H]

Identifier: 20807647

GI number: 20807647

Start: 1188659

End: 1191121

Strand: Direct

Name: RecJ [H]

Synonym: TTE1191

Alternate gene names: 20807647

Gene position: 1188659-1191121 (Clockwise)

Preceding gene: 20807646

Following gene: 20807648

Centisome position: 44.2

GC content: 34.96

Gene sequence:

>2463_bases
ATGGATAAAATTTATAGATGGGTCGTAAGAGAAAGGGATTTAAAGAAGATAGAGGAATTAAAGGTAAAGTACCATTTGGA
TGGAATTGTAGCGCAAATCCTTTCTTCAAGAGGAGTAAAAGGCGTTGAGGAATTTCTCATGCCTTCTTTAGATAGGCTTA
TTTCGCCTTTTGAACTAAAAGGAGTGAAAGAAGCGAAGGAATTGATAGAGAAGCACATAAAAGAAGGCAGTTTGATTACT
ATTTACGGAGATTATGATGTGGATGGTATAACTTCTACATCTCTTTTATATCTTGCTTTAAAAAAATTAGGTGCTAAGGT
GGACTACTACATTCCAGAGAGGTTATCAGAAGGGTATGGTATAAATGAGGAAGCTCTGGAGAAAATCGCCTATGAAGGCG
CTAAACTTGTAATAACTGTTGATTGCGGAATTACTGCTTTAAAAGAAGTTGAAAAAGCGAAAAAGATGGGGCTAGATGTG
ATAATTACAGACCATCACAGCATTCCGGAGGAAATTCCAAAAGCGGATGTTGTCATAAATCCTCATTTGCCAGGAGCTTA
TCCTTTTTCCGAGCTTGCAGGAGTCGGAGTAGCATTTAAGCTGGCTCAAGCCTTAATTGGAGAGCAAGCATTTGAATTTT
TAGATTTAGTCGCTTTAGGGACAGTTGCTGATATTGTGCCGCTAATAGGTGAAAATAGAGTAATTGTAAAAGAAGGGCTA
AAGAGGCTTAACAATACAGGGAATTTGGGCCTTAAAGCTTTAATTGAAATTGCAGGGGTATCTGGAAGAGAACTTGATGA
ATACCACATAGGTTTTATAATAGCTCCAAGGCTTAATGCAGCGGGGCGGTTAAAAAGTGCAGAGGCGGCAGTTAGACTAT
TGATAACTTCTGATGAAAAAGAAGCACAGGATATAGCTAAATATCTAAACGAAGAGAATTTGAGAAGACAAAATATGGAA
AACACTATCTTAAAAGAAGCTATAGAGAAAATAGAGAAGGAAGGATTGAAAGATGACAAAGTAATTGTCTTATGGCAAGA
AGGATGGCATCCGGGAGTTATAGGAATAGTTTCTTCTAAGATAACTGAAATGTATGGAAGGCCCTCCATCCTTATAGGAT
TAATAGGAGAGGAAGGGAAAGGGTCAGGAAGGAGTGTAGAGGGTTTTAATATTTATAAAGCTTTGAATTACTGTAAGGAC
CTCCTTGTAAAATATGGTGGGCACGAAATGGCGGGGGGACTTACAATTCAAAAGGAAAATTTAAAGCTTTTCAAAGATAA
AATAAACGAGTATGCTGATAGGTTTGTAAAAGAAATAGACCTTGTTCCTGCTTTGAAGATAGATGCAGTTGTAAAAAAGG
ATAAGGCTGACTTGGGAATAGCCAAGAAAATACAGCAGTTAAAGCCTTTTGGAGTAGGCAATCCGAAGCCTTTACTTCTT
TTTGAAGGGCTTACGATAGATAAAATTTTTGATATAAAGGACGGAAAGCATATAAAAATTCTGGCAAAAAAGGATGAAAT
GGTTTATGAACTTTTAATTTTTAATTCTTCTTCTGACGGTTTAAAAATTTCCGAAGGAGATGTGGTTGATGCAGTAGGAA
CATTAGAAATAAGCCACTGGAATGGCATTGAATCAGCGATTGTGAATGTGAAAGATATAAGGGTAAGATTTCCTCTCTTT
GCATACTACAGAAATTTGAGCAAATCTTTAATTTACAAAAAAGCTTTTAAATTAAGGGACGAAGCCAGGTTAAAGGCTAA
TATTGTAGACAGAAGAGGAATTCAGGATAAAGAAAAGTATGTACTGCATCTTTTTAAAAGTCCCAGAAAAACTCTAATTT
TAGTTAACACAGAGGCAGAATTTAGAGCTTTAATTAGATATTTAAAAAAGGAAAAATTTTACGATTTTTCTGTTTCAGCT
GGCTACTGTGAGGAAGAGAACCTAATTTTATTTTCTCCGTTTTCACTGGAAAAATGCGATTTTTACGAAGACATAGTGAT
TTACGACATTCCATTTGACAGAAAAGTTTTTTACGATGCTCTTTCCTTTGGCGATAGGAAAAGAGTACACCTTGTGTTTA
ATAAAAAGGACCTTCATAAAAATTTGAAAGTTTTTGATGAGATTTTGCCCAGCAGGGATGATTTTATAAAAATTTACAAA
TTTATAGATGAAGGGAATAAGTTTTTCTTTAAAGGGTATTTGAATCCCGAACTTAATTTAAACCCGGTGAAATTTGCAAT
TTGTCTAGAAGTGATGAAAGAAACAGGATTGATAAATGTAGAAGAACGTGATAATATTGTAATGTTGAGTAAAAATTTTG
TGCCAGAAAAGGTGAACTTGAAAGAGGCGGAAATTTTGCAGAAGTTCATTGAAGCAAAGAAAGAATTTTTAGATTTTGCT
AAATTTGCTTTCAAGCCTAATTTCAGGGAGGTCAAAACAGTTGAAATTAGTAGTAAAAAATGA

Upstream 100 bases:

>100_bases
ATTTTTCGGATATGTAATTGCTACCATGCTGAGTTTGTGGGTGTTTTACAGGATATTCATAGTAGAGAGGAAGAAAAAAT
AGGTCTTTCAGGTGAGATAG

Downstream 100 bases:

>100_bases
TATAATTTTAATTAGGTGATGATGAATGTTATTAACTATAAAAAAGGTTAAAGAGCTGTATGATATAAGCAGAATTACAT
TAATAAACTGGGAAAAGGAA

Product: single-stranded DNA-specific exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 820; Mature: 820

Protein sequence:

>820_residues
MDKIYRWVVRERDLKKIEELKVKYHLDGIVAQILSSRGVKGVEEFLMPSLDRLISPFELKGVKEAKELIEKHIKEGSLIT
IYGDYDVDGITSTSLLYLALKKLGAKVDYYIPERLSEGYGINEEALEKIAYEGAKLVITVDCGITALKEVEKAKKMGLDV
IITDHHSIPEEIPKADVVINPHLPGAYPFSELAGVGVAFKLAQALIGEQAFEFLDLVALGTVADIVPLIGENRVIVKEGL
KRLNNTGNLGLKALIEIAGVSGRELDEYHIGFIIAPRLNAAGRLKSAEAAVRLLITSDEKEAQDIAKYLNEENLRRQNME
NTILKEAIEKIEKEGLKDDKVIVLWQEGWHPGVIGIVSSKITEMYGRPSILIGLIGEEGKGSGRSVEGFNIYKALNYCKD
LLVKYGGHEMAGGLTIQKENLKLFKDKINEYADRFVKEIDLVPALKIDAVVKKDKADLGIAKKIQQLKPFGVGNPKPLLL
FEGLTIDKIFDIKDGKHIKILAKKDEMVYELLIFNSSSDGLKISEGDVVDAVGTLEISHWNGIESAIVNVKDIRVRFPLF
AYYRNLSKSLIYKKAFKLRDEARLKANIVDRRGIQDKEKYVLHLFKSPRKTLILVNTEAEFRALIRYLKKEKFYDFSVSA
GYCEEENLILFSPFSLEKCDFYEDIVIYDIPFDRKVFYDALSFGDRKRVHLVFNKKDLHKNLKVFDEILPSRDDFIKIYK
FIDEGNKFFFKGYLNPELNLNPVKFAICLEVMKETGLINVEERDNIVMLSKNFVPEKVNLKEAEILQKFIEAKKEFLDFA
KFAFKPNFREVKTVEISSKK

Sequences:

>Translated_820_residues
MDKIYRWVVRERDLKKIEELKVKYHLDGIVAQILSSRGVKGVEEFLMPSLDRLISPFELKGVKEAKELIEKHIKEGSLIT
IYGDYDVDGITSTSLLYLALKKLGAKVDYYIPERLSEGYGINEEALEKIAYEGAKLVITVDCGITALKEVEKAKKMGLDV
IITDHHSIPEEIPKADVVINPHLPGAYPFSELAGVGVAFKLAQALIGEQAFEFLDLVALGTVADIVPLIGENRVIVKEGL
KRLNNTGNLGLKALIEIAGVSGRELDEYHIGFIIAPRLNAAGRLKSAEAAVRLLITSDEKEAQDIAKYLNEENLRRQNME
NTILKEAIEKIEKEGLKDDKVIVLWQEGWHPGVIGIVSSKITEMYGRPSILIGLIGEEGKGSGRSVEGFNIYKALNYCKD
LLVKYGGHEMAGGLTIQKENLKLFKDKINEYADRFVKEIDLVPALKIDAVVKKDKADLGIAKKIQQLKPFGVGNPKPLLL
FEGLTIDKIFDIKDGKHIKILAKKDEMVYELLIFNSSSDGLKISEGDVVDAVGTLEISHWNGIESAIVNVKDIRVRFPLF
AYYRNLSKSLIYKKAFKLRDEARLKANIVDRRGIQDKEKYVLHLFKSPRKTLILVNTEAEFRALIRYLKKEKFYDFSVSA
GYCEEENLILFSPFSLEKCDFYEDIVIYDIPFDRKVFYDALSFGDRKRVHLVFNKKDLHKNLKVFDEILPSRDDFIKIYK
FIDEGNKFFFKGYLNPELNLNPVKFAICLEVMKETGLINVEERDNIVMLSKNFVPEKVNLKEAEILQKFIEAKKEFLDFA
KFAFKPNFREVKTVEISSKK
>Mature_820_residues
MDKIYRWVVRERDLKKIEELKVKYHLDGIVAQILSSRGVKGVEEFLMPSLDRLISPFELKGVKEAKELIEKHIKEGSLIT
IYGDYDVDGITSTSLLYLALKKLGAKVDYYIPERLSEGYGINEEALEKIAYEGAKLVITVDCGITALKEVEKAKKMGLDV
IITDHHSIPEEIPKADVVINPHLPGAYPFSELAGVGVAFKLAQALIGEQAFEFLDLVALGTVADIVPLIGENRVIVKEGL
KRLNNTGNLGLKALIEIAGVSGRELDEYHIGFIIAPRLNAAGRLKSAEAAVRLLITSDEKEAQDIAKYLNEENLRRQNME
NTILKEAIEKIEKEGLKDDKVIVLWQEGWHPGVIGIVSSKITEMYGRPSILIGLIGEEGKGSGRSVEGFNIYKALNYCKD
LLVKYGGHEMAGGLTIQKENLKLFKDKINEYADRFVKEIDLVPALKIDAVVKKDKADLGIAKKIQQLKPFGVGNPKPLLL
FEGLTIDKIFDIKDGKHIKILAKKDEMVYELLIFNSSSDGLKISEGDVVDAVGTLEISHWNGIESAIVNVKDIRVRFPLF
AYYRNLSKSLIYKKAFKLRDEARLKANIVDRRGIQDKEKYVLHLFKSPRKTLILVNTEAEFRALIRYLKKEKFYDFSVSA
GYCEEENLILFSPFSLEKCDFYEDIVIYDIPFDRKVFYDALSFGDRKRVHLVFNKKDLHKNLKVFDEILPSRDDFIKIYK
FIDEGNKFFFKGYLNPELNLNPVKFAICLEVMKETGLINVEERDNIVMLSKNFVPEKVNLKEAEILQKFIEAKKEFLDFA
KFAFKPNFREVKTVEISSKK

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=501, Percent_Identity=34.7305389221557, Blast_Score=286, Evalue=4e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 93111; Mature: 93111

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIYRWVVRERDLKKIEELKVKYHLDGIVAQILSSRGVKGVEEFLMPSLDRLISPFELK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHC
GVKEAKELIEKHIKEGSLITIYGDYDVDGITSTSLLYLALKKLGAKVDYYIPERLSEGYG
CHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEECHHHHCCCCC
INEEALEKIAYEGAKLVITVDCGITALKEVEKAKKMGLDVIITDHHSIPEEIPKADVVIN
CCHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCCEEEC
PHLPGAYPFSELAGVGVAFKLAQALIGEQAFEFLDLVALGTVADIVPLIGENRVIVKEGL
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHH
KRLNNTGNLGLKALIEIAGVSGRELDEYHIGFIIAPRLNAAGRLKSAEAAVRLLITSDEK
HHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCH
EAQDIAKYLNEENLRRQNMENTILKEAIEKIEKEGLKDDKVIVLWQEGWHPGVIGIVSSK
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHH
ITEMYGRPSILIGLIGEEGKGSGRSVEGFNIYKALNYCKDLLVKYGGHEMAGGLTIQKEN
HHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCH
LKLFKDKINEYADRFVKEIDLVPALKIDAVVKKDKADLGIAKKIQQLKPFGVGNPKPLLL
HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEE
FEGLTIDKIFDIKDGKHIKILAKKDEMVYELLIFNSSSDGLKISEGDVVDAVGTLEISHW
ECCCCEEEEEECCCCCEEEEEECCCCEEEEEEEEECCCCCCEECCCCEEECEEEEEEECC
NGIESAIVNVKDIRVRFPLFAYYRNLSKSLIYKKAFKLRDEARLKANIVDRRGIQDKEKY
CCHHHHHCCHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
VLHLFKSPRKTLILVNTEAEFRALIRYLKKEKFYDFSVSAGYCEEENLILFSPFSLEKCD
HHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEECCCCCCCCC
FYEDIVIYDIPFDRKVFYDALSFGDRKRVHLVFNKKDLHKNLKVFDEILPSRDDFIKIYK
CCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHH
FIDEGNKFFFKGYLNPELNLNPVKFAICLEVMKETGLINVEERDNIVMLSKNFVPEKVNL
HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCC
KEAEILQKFIEAKKEFLDFAKFAFKPNFREVKTVEISSKK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MDKIYRWVVRERDLKKIEELKVKYHLDGIVAQILSSRGVKGVEEFLMPSLDRLISPFELK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHC
GVKEAKELIEKHIKEGSLITIYGDYDVDGITSTSLLYLALKKLGAKVDYYIPERLSEGYG
CHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEECHHHHCCCCC
INEEALEKIAYEGAKLVITVDCGITALKEVEKAKKMGLDVIITDHHSIPEEIPKADVVIN
CCHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCHHHCCCCCEEEC
PHLPGAYPFSELAGVGVAFKLAQALIGEQAFEFLDLVALGTVADIVPLIGENRVIVKEGL
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHH
KRLNNTGNLGLKALIEIAGVSGRELDEYHIGFIIAPRLNAAGRLKSAEAAVRLLITSDEK
HHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCH
EAQDIAKYLNEENLRRQNMENTILKEAIEKIEKEGLKDDKVIVLWQEGWHPGVIGIVSSK
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHH
ITEMYGRPSILIGLIGEEGKGSGRSVEGFNIYKALNYCKDLLVKYGGHEMAGGLTIQKEN
HHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCH
LKLFKDKINEYADRFVKEIDLVPALKIDAVVKKDKADLGIAKKIQQLKPFGVGNPKPLLL
HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEE
FEGLTIDKIFDIKDGKHIKILAKKDEMVYELLIFNSSSDGLKISEGDVVDAVGTLEISHW
ECCCCEEEEEECCCCCEEEEEECCCCEEEEEEEEECCCCCCEECCCCEEECEEEEEEECC
NGIESAIVNVKDIRVRFPLFAYYRNLSKSLIYKKAFKLRDEARLKANIVDRRGIQDKEKY
CCHHHHHCCHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
VLHLFKSPRKTLILVNTEAEFRALIRYLKKEKFYDFSVSAGYCEEENLILFSPFSLEKCD
HHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEECCCCCCCCC
FYEDIVIYDIPFDRKVFYDALSFGDRKRVHLVFNKKDLHKNLKVFDEILPSRDDFIKIYK
CCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHH
FIDEGNKFFFKGYLNPELNLNPVKFAICLEVMKETGLINVEERDNIVMLSKNFVPEKVNL
HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCCCCCCC
KEAEILQKFIEAKKEFLDFAKFAFKPNFREVKTVEISSKK
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]