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The map label for this gene is OmpR3 [H]

Identifier: 20807496

GI number: 20807496

Start: 1018564

End: 1019253

Strand: Direct

Name: OmpR3 [H]

Synonym: TTE1016

Alternate gene names: 20807496

Gene position: 1018564-1019253 (Clockwise)

Preceding gene: 20807495

Following gene: 20807497

Centisome position: 37.87

GC content: 37.25

Gene sequence:

>690_bases
ATGAAGGAAAAGATACTGATTGTAGAAGATGAAAGACAGATAGCGCGTTTTTTACAATTGGAATTCGAACACGAAGGCTA
TGAAGTAAAAATAGTTTACGACGGAACCTCAGGCGTGAAAGAAGCTTTAGAGGGCGATTATGACCTTGTGCTTTTGGATA
TAATGCTTCCAGGAATGGATGGATATGAAGTTTTGAAAAAAATAAGAGAAAACTCTGACATACCTGTTATAATGCTTACA
GCAAAATATGAGGTGAAAGACAAGGTAAGAGGGCTAGACATTGGTGCAGATGACTATGTAACTAAGCCTTTTTCTATAGA
GGAGCTTTTCGCTAGAGTGAGGGCTGCATTGAGAAAGAGAAATCCCAGTATTAAAAAAGATGTGCTGAAGTTTGCTGGTA
TTGTTATGGATTTGACTACTCATGAGGTCAGGAGGCAGGGAGTAAAAATTGACCTTACGAAAAAAGAGTTTGACCTTTTA
GAATTTTTAATGAGAAATGCGAATATTGCTCTTTCTAGAGAAAAAATTCTGCGGTCAGTTTGGGGATATGACTATTATGG
GGATACCAATGTAGTAGACGTGTACATAAGGTATTTGAGAAGCAAAATTGACGACCCATTTGACAGAAAATTGATTCACA
CTATAAGGGGAGTAGGTTACAGTTTGAGAGATGGTGAAGATGAAGATTAA

Upstream 100 bases:

>100_bases
AGAAGGTCGGACCATAATTAAGAAGGCTGAATGCGTCGACGTTTCATATCCCGATTTCTATAAGACATTTGATATGCTAT
AATTTTATTGGTGATGGCCA

Downstream 100 bases:

>100_bases
ATTGTTACCTCAGCGCATAACTTTAAAAATAGCGCTTCTTTATTCAGCAGTTTTTTCATTTGTGCTGATTTCTTTGAATG
CCTCAGTGCTTTACACTTTG

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKEKILIVEDERQIARFLQLEFEHEGYEVKIVYDGTSGVKEALEGDYDLVLLDIMLPGMDGYEVLKKIRENSDIPVIMLT
AKYEVKDKVRGLDIGADDYVTKPFSIEELFARVRAALRKRNPSIKKDVLKFAGIVMDLTTHEVRRQGVKIDLTKKEFDLL
EFLMRNANIALSREKILRSVWGYDYYGDTNVVDVYIRYLRSKIDDPFDRKLIHTIRGVGYSLRDGEDED

Sequences:

>Translated_229_residues
MKEKILIVEDERQIARFLQLEFEHEGYEVKIVYDGTSGVKEALEGDYDLVLLDIMLPGMDGYEVLKKIRENSDIPVIMLT
AKYEVKDKVRGLDIGADDYVTKPFSIEELFARVRAALRKRNPSIKKDVLKFAGIVMDLTTHEVRRQGVKIDLTKKEFDLL
EFLMRNANIALSREKILRSVWGYDYYGDTNVVDVYIRYLRSKIDDPFDRKLIHTIRGVGYSLRDGEDED
>Mature_229_residues
MKEKILIVEDERQIARFLQLEFEHEGYEVKIVYDGTSGVKEALEGDYDLVLLDIMLPGMDGYEVLKKIRENSDIPVIMLT
AKYEVKDKVRGLDIGADDYVTKPFSIEELFARVRAALRKRNPSIKKDVLKFAGIVMDLTTHEVRRQGVKIDLTKKEFDLL
EFLMRNANIALSREKILRSVWGYDYYGDTNVVDVYIRYLRSKIDDPFDRKLIHTIRGVGYSLRDGEDED

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082012, Length=219, Percent_Identity=47.4885844748858, Blast_Score=207, Evalue=6e-55,
Organism=Escherichia coli, GI1786784, Length=226, Percent_Identity=42.4778761061947, Blast_Score=191, Evalue=4e-50,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=39.9103139013453, Blast_Score=170, Evalue=8e-44,
Organism=Escherichia coli, GI1786911, Length=219, Percent_Identity=38.8127853881278, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=35.1111111111111, Blast_Score=140, Evalue=8e-35,
Organism=Escherichia coli, GI1790552, Length=229, Percent_Identity=38.8646288209607, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=37.10407239819, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=36.0869565217391, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1790860, Length=228, Percent_Identity=35.5263157894737, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1788394, Length=222, Percent_Identity=35.5855855855856, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787375, Length=225, Percent_Identity=31.5555555555556, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI2367329, Length=225, Percent_Identity=35.5555555555556, Blast_Score=117, Evalue=5e-28,
Organism=Escherichia coli, GI1790863, Length=225, Percent_Identity=34.2222222222222, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1788550, Length=126, Percent_Identity=38.8888888888889, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI145693140, Length=229, Percent_Identity=27.5109170305677, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1790437, Length=114, Percent_Identity=35.9649122807018, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788713, Length=109, Percent_Identity=32.1100917431193, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790299, Length=135, Percent_Identity=28.1481481481481, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI145693157, Length=104, Percent_Identity=32.6923076923077, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26619; Mature: 26619

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKILIVEDERQIARFLQLEFEHEGYEVKIVYDGTSGVKEALEGDYDLVLLDIMLPGMD
CCCCEEEEECHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCCEEEEEECCCCCC
GYEVLKKIRENSDIPVIMLTAKYEVKDKVRGLDIGADDYVTKPFSIEELFARVRAALRKR
HHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
NPSIKKDVLKFAGIVMDLTTHEVRRQGVKIDLTKKEFDLLEFLMRNANIALSREKILRSV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCEECHHHHHHHH
WGYDYYGDTNVVDVYIRYLRSKIDDPFDRKLIHTIRGVGYSLRDGEDED
HCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKEKILIVEDERQIARFLQLEFEHEGYEVKIVYDGTSGVKEALEGDYDLVLLDIMLPGMD
CCCCEEEEECHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCCEEEEEECCCCCC
GYEVLKKIRENSDIPVIMLTAKYEVKDKVRGLDIGADDYVTKPFSIEELFARVRAALRKR
HHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
NPSIKKDVLKFAGIVMDLTTHEVRRQGVKIDLTKKEFDLLEFLMRNANIALSREKILRSV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCEECHHHHHHHH
WGYDYYGDTNVVDVYIRYLRSKIDDPFDRKLIHTIRGVGYSLRDGEDED
HCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]