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The map label for this gene is SdaA [H]

Identifier: 20807488

GI number: 20807488

Start: 1009942

End: 1010610

Strand: Direct

Name: SdaA [H]

Synonym: TTE1008

Alternate gene names: 20807488

Gene position: 1009942-1010610 (Clockwise)

Preceding gene: 20807487

Following gene: 20807489

Centisome position: 37.55

GC content: 39.91

Gene sequence:

>669_bases
ATGAGGGAATTTTCTGTTTTTGATATTATGGGGCCTATAATGATTGGCCCGAGCAGCTCCCATACTGCGGGGGCAGCCAG
GCTTGCTAAAATTGCTAGAAAGATTGCGGACGATGAGATAAAAGAGGTGGAATTTATTTTATACGAATCTTTTGCCAGAA
CCTATAAAGGCCATGGCACAGACAGGGCGTTACTTGCAGGGATATTGGGATTTGATCCTGATGACGAGAGATTGCCTCGT
TCTTTTGAAATTGCTGAAGAATTAGGACTTAAGTTTAAATTTACTGAAAGCGATGAAGAAGCTCCCCATCCAAACACAGT
GAGGATGATAATTAAGACCTCTGATGGAAAGACTTATAATATTTTAGGCTGTTCTGTAGGCGGAGGTAATGTCCTTTTAA
AAGAAATAAATGGCATAGAAGTAGAGTTTACTGGGGAGTATGAGACTTTAATTACCACCCATATAGATAAGCCTGGGATT
GTGGCTGCTGTGACCAAAGTGCTGGCAGACTGCAATATAAATATTGCCTTCATGAGAGTTTACAGGCATGCAAAGGGCGA
TAAAGCCATAATGGTCATAGAGTCTGACCAGGAAATCCCTGAAAGAGCTAAAGAAGTGATTAAAAATATTGATGGAATTT
TGAATGCCATAATTTTAAATCCTGTGTAA

Upstream 100 bases:

>100_bases
GCCTTTCTATTGACCAGGCTTTTAAAGAGGTATTGATAGAGGAAAGCAAAGTAAAAAAGATTAGGGTAAGGAAAATAGGG
AAAGAGTAAAGGGGATTGAT

Downstream 100 bases:

>100_bases
TGGAGGGCATGCTTTTATGTATCAATTCAATTACGGATATGAACTTTTAGAGCTTACAAAAAAGTTCAATAAGCCTATAT
CGGAAATTGTAATGCTGGCC

Product: L-serine deaminase

Products: NA

Alternate protein names: SDH; L-serine deaminase; L-SD [H]

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MREFSVFDIMGPIMIGPSSSHTAGAARLAKIARKIADDEIKEVEFILYESFARTYKGHGTDRALLAGILGFDPDDERLPR
SFEIAEELGLKFKFTESDEEAPHPNTVRMIIKTSDGKTYNILGCSVGGGNVLLKEINGIEVEFTGEYETLITTHIDKPGI
VAAVTKVLADCNINIAFMRVYRHAKGDKAIMVIESDQEIPERAKEVIKNIDGILNAIILNPV

Sequences:

>Translated_222_residues
MREFSVFDIMGPIMIGPSSSHTAGAARLAKIARKIADDEIKEVEFILYESFARTYKGHGTDRALLAGILGFDPDDERLPR
SFEIAEELGLKFKFTESDEEAPHPNTVRMIIKTSDGKTYNILGCSVGGGNVLLKEINGIEVEFTGEYETLITTHIDKPGI
VAAVTKVLADCNINIAFMRVYRHAKGDKAIMVIESDQEIPERAKEVIKNIDGILNAIILNPV
>Mature_222_residues
MREFSVFDIMGPIMIGPSSSHTAGAARLAKIARKIADDEIKEVEFILYESFARTYKGHGTDRALLAGILGFDPDDERLPR
SFEIAEELGLKFKFTESDEEAPHPNTVRMIIKTSDGKTYNILGCSVGGGNVLLKEINGIEVEFTGEYETLITTHIDKPGI
VAAVTKVLADCNINIAFMRVYRHAKGDKAIMVIESDQEIPERAKEVIKNIDGILNAIILNPV

Specific function: Deaminates Also Threonine, Particularly When It Is Present In High Concentration. [C]

COG id: COG1760

COG function: function code E; L-serine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004643
- InterPro:   IPR005131 [H]

Pfam domain/function: PF03315 SDH_beta [H]

EC number: =4.3.1.17 [H]

Molecular weight: Translated: 24480; Mature: 24480

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREFSVFDIMGPIMIGPSSSHTAGAARLAKIARKIADDEIKEVEFILYESFARTYKGHGT
CCCCCHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
DRALLAGILGFDPDDERLPRSFEIAEELGLKFKFTESDEEAPHPNTVRMIIKTSDGKTYN
CHHHHHHHHCCCCCHHHCCCHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCCCCEEE
ILGCSVGGGNVLLKEINGIEVEFTGEYETLITTHIDKPGIVAAVTKVLADCNINIAFMRV
EEEEECCCCCEEEEECCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHH
YRHAKGDKAIMVIESDQEIPERAKEVIKNIDGILNAIILNPV
HHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MREFSVFDIMGPIMIGPSSSHTAGAARLAKIARKIADDEIKEVEFILYESFARTYKGHGT
CCCCCHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
DRALLAGILGFDPDDERLPRSFEIAEELGLKFKFTESDEEAPHPNTVRMIIKTSDGKTYN
CHHHHHHHHCCCCCHHHCCCHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCCCCEEE
ILGCSVGGGNVLLKEINGIEVEFTGEYETLITTHIDKPGIVAAVTKVLADCNINIAFMRV
EEEEECCCCCEEEEECCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHH
YRHAKGDKAIMVIESDQEIPERAKEVIKNIDGILNAIILNPV
HHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9244285; 2065681 [H]