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The map label for this gene is Cda1 [H]

Identifier: 20807347

GI number: 20807347

Start: 874650

End: 875624

Strand: Reverse

Name: Cda1 [H]

Synonym: TTE0866

Alternate gene names: 20807347

Gene position: 875624-874650 (Counterclockwise)

Preceding gene: 20807349

Following gene: 20807343

Centisome position: 32.56

GC content: 36.21

Gene sequence:

>975_bases
ATGCGCTTTAAATCCTTTGCAATCATACTTTTAGTTTCAATACTGGTAGGTTCCGTTGCTTTCGCCTACAAATACATCAC
TGAAGATAAATATCTTCAAACGAATTTTTATTCTGCAAACCAAAAAGAAAATGTGAATTTAAATACCCTTGACAGTAAAT
CTAACAATAGCAAAACAATTACAAGCGAAGAACGTCCTTTAAGCGAAACGGAGCAAAATTACGTCTCTTCAACACCAGAA
CCTTCTACTCCTGAAAAGGTCTTAGAAAAACATAATAAAGATCTAGACAATGACCCTAACATAAGCCAATTTATTCTCAA
CTTTGTAAACAGGCCTGAAAGAGACAAACTCTTCGGTTCCCCTGTAGCTTTTAGCAAAAAGGTATTAGGTTCAAATCCTT
CCTCTGGAAAAGAAGTAGCTTTGACTTTTGATGACGGCCCTTTTCCAATTTACACAGAAAAATACGTTGATATATTAAAG
AGCATGGATGTAAAAGCTACATTTTTTGTGATAGGAAAGCACGCTGAAAAACACCCAGAGCTTTTAAAGTACATCGTAGA
AAATGGAAATGAAATTGGGCTTCACTCCTACAGCCATTTTAATATGAAAAAATTAAAACCCGAAAAAATGGTAGAAGAAC
TTTACAAAACGCAGCAGATAATAGTAGAAGCAACCGGGATAAAGCCCACTCTTTTTAGGCCCCCTTTTGGGGCTTACAAC
TCTACTTTAATAGAGATTTCAAACGCTTTAGGACTAAAAGTAGTTTTGTGGAATGTGGACCCGGACGACTGGCGAAATCC
TTCTGTTGAAAGCGTAGTAAATAGAGTCTTGTCTCACACAAGAGACGGTTCAATAATACTCATGCACGAAGGAAAACCTA
GCACTTTGGCTGCACTGCCTCAAATTATAAAAAAGTTAAAAGAAGAGGGATATAAATTTGTCACTGTTTCAGAACTTTTA
GAAAAGAGGGATTAA

Upstream 100 bases:

>100_bases
TATATTGAAAAGTTACAAAACTGTAACACAAAGTTAATAAATTCTTAATAAATTTAAAGCCTTCCAATGCTATAATAAAG
CTACATAAGGAGATGGTCAA

Downstream 100 bases:

>100_bases
AATTCTAATCCCTCTCAGTTTGTTGACAAAGCAAAATTTTAGCCCCTGTTTTCTTAGTACCGAAAGCAGGGGCTGTATAT
ATCTGGATAAAATTTTCTTT

Product: xylanase/chitin deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MRFKSFAIILLVSILVGSVAFAYKYITEDKYLQTNFYSANQKENVNLNTLDSKSNNSKTITSEERPLSETEQNYVSSTPE
PSTPEKVLEKHNKDLDNDPNISQFILNFVNRPERDKLFGSPVAFSKKVLGSNPSSGKEVALTFDDGPFPIYTEKYVDILK
SMDVKATFFVIGKHAEKHPELLKYIVENGNEIGLHSYSHFNMKKLKPEKMVEELYKTQQIIVEATGIKPTLFRPPFGAYN
STLIEISNALGLKVVLWNVDPDDWRNPSVESVVNRVLSHTRDGSIILMHEGKPSTLAALPQIIKKLKEEGYKFVTVSELL
EKRD

Sequences:

>Translated_324_residues
MRFKSFAIILLVSILVGSVAFAYKYITEDKYLQTNFYSANQKENVNLNTLDSKSNNSKTITSEERPLSETEQNYVSSTPE
PSTPEKVLEKHNKDLDNDPNISQFILNFVNRPERDKLFGSPVAFSKKVLGSNPSSGKEVALTFDDGPFPIYTEKYVDILK
SMDVKATFFVIGKHAEKHPELLKYIVENGNEIGLHSYSHFNMKKLKPEKMVEELYKTQQIIVEATGIKPTLFRPPFGAYN
STLIEISNALGLKVVLWNVDPDDWRNPSVESVVNRVLSHTRDGSIILMHEGKPSTLAALPQIIKKLKEEGYKFVTVSELL
EKRD
>Mature_324_residues
MRFKSFAIILLVSILVGSVAFAYKYITEDKYLQTNFYSANQKENVNLNTLDSKSNNSKTITSEERPLSETEQNYVSSTPE
PSTPEKVLEKHNKDLDNDPNISQFILNFVNRPERDKLFGSPVAFSKKVLGSNPSSGKEVALTFDDGPFPIYTEKYVDILK
SMDVKATFFVIGKHAEKHPELLKYIVENGNEIGLHSYSHFNMKKLKPEKMVEELYKTQQIIVEATGIKPTLFRPPFGAYN
STLIEISNALGLKVVLWNVDPDDWRNPSVESVVNRVLSHTRDGSIILMHEGKPSTLAALPQIIKKLKEEGYKFVTVSELL
EKRD

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=133, Percent_Identity=36.8421052631579, Blast_Score=87, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6323339, Length=182, Percent_Identity=28.021978021978, Blast_Score=80, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 36722; Mature: 36722

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFKSFAIILLVSILVGSVAFAYKYITEDKYLQTNFYSANQKENVNLNTLDSKSNNSKTI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCEE
TSEERPLSETEQNYVSSTPEPSTPEKVLEKHNKDLDNDPNISQFILNFVNRPERDKLFGS
CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHCCC
PVAFSKKVLGSNPSSGKEVALTFDDGPFPIYTEKYVDILKSMDVKATFFVIGKHAEKHPE
CHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHH
LLKYIVENGNEIGLHSYSHFNMKKLKPEKMVEELYKTQQIIVEATGIKPTLFRPPFGAYN
HHHHHHHCCCEECCCCCCCCCHHHCCHHHHHHHHHHHHHEEEEECCCCCEECCCCCCCCC
STLIEISNALGLKVVLWNVDPDDWRNPSVESVVNRVLSHTRDGSIILMHEGKPSTLAALP
CHHEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
QIIKKLKEEGYKFVTVSELLEKRD
HHHHHHHHCCCEEEEHHHHHHHCC
>Mature Secondary Structure
MRFKSFAIILLVSILVGSVAFAYKYITEDKYLQTNFYSANQKENVNLNTLDSKSNNSKTI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCCCCCCEE
TSEERPLSETEQNYVSSTPEPSTPEKVLEKHNKDLDNDPNISQFILNFVNRPERDKLFGS
CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHCCC
PVAFSKKVLGSNPSSGKEVALTFDDGPFPIYTEKYVDILKSMDVKATFFVIGKHAEKHPE
CHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHH
LLKYIVENGNEIGLHSYSHFNMKKLKPEKMVEELYKTQQIIVEATGIKPTLFRPPFGAYN
HHHHHHHCCCEECCCCCCCCCHHHCCHHHHHHHHHHHHHEEEEECCCCCEECCCCCCCCC
STLIEISNALGLKVVLWNVDPDDWRNPSVESVVNRVLSHTRDGSIILMHEGKPSTLAALP
CHHEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
QIIKKLKEEGYKFVTVSELLEKRD
HHHHHHHHCCCEEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]