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The map label for this gene is sleB [H]

Identifier: 20807309

GI number: 20807309

Start: 835246

End: 835839

Strand: Direct

Name: sleB [H]

Synonym: TTE0827

Alternate gene names: 20807309

Gene position: 835246-835839 (Clockwise)

Preceding gene: 20807307

Following gene: 20807310

Centisome position: 31.06

GC content: 42.09

Gene sequence:

>594_bases
ATGAAAAAAGTTGTAGCAGTAATACTTGCTTTTGTGATGGCTTTTGGAGTAGTCTCTCAGGCTTATGCTTATACGAAGGT
GCACGTGGTATCAAGGGGAGAATCCCTGTATTTGATTGCAACATGGTATGGAAGCGATTTGGACAGCATAAGGCAGGCAA
ATAATAAGTGGGATAATTTGATATATCCAGGGGAAAAACTTTTAGTTCCTATAAAAGAGGACAGCGATCACTACAATTAC
TTGGTGGACAGGTATTTAATTGCTAAGATGATATATGCTGAGGCTAGAGGAGAGAGTTTTGAAGGGAAGGTAGCAGTTGG
AGCAGTGATTTTGAATAGAGTAAAAAGCGGAATTTTCCCCAATACAGTAGCAGGAGTTATTTACCAGCCTTATGCTTTTG
AATCTGTGCTAAATGGAGAATTTTTCAACCACGAGCCCGACCTGGAAGCTTTTAAAGCGGCTGATGCTGCTTTAGCCGGT
TGGGACCCAACAGGAGGAGCTTTGTATTTTTTCAACCCAGCGACTTCTACCTCCTGGTGGATATGGACAAGGCCTGTTAC
TACAGTAATAGGTCATCACTGGTTTGCGAGATAG

Upstream 100 bases:

>100_bases
AATACGAGAGTTGTCTTGAAAGGAGGAAGGAGCTATAATTGTAAACGAATTTGACTCCTGCTATTGTTGAAAAACAACAA
TAGAAAGGAGGAAGAAGGCT

Downstream 100 bases:

>100_bases
GAGTAATTTCCTATCTCGCTTTTTTATAATAAATTCATTGATTTTGTAGGAAAATAAGGATTAGAAGTACACAAGAGGTG
AATTTTTATGAAAAAGATTT

Product: LysM domain-containing protein

Products: NA

Alternate protein names: SCLE [H]

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKKVVAVILAFVMAFGVVSQAYAYTKVHVVSRGESLYLIATWYGSDLDSIRQANNKWDNLIYPGEKLLVPIKEDSDHYNY
LVDRYLIAKMIYAEARGESFEGKVAVGAVILNRVKSGIFPNTVAGVIYQPYAFESVLNGEFFNHEPDLEAFKAADAALAG
WDPTGGALYFFNPATSTSWWIWTRPVTTVIGHHWFAR

Sequences:

>Translated_197_residues
MKKVVAVILAFVMAFGVVSQAYAYTKVHVVSRGESLYLIATWYGSDLDSIRQANNKWDNLIYPGEKLLVPIKEDSDHYNY
LVDRYLIAKMIYAEARGESFEGKVAVGAVILNRVKSGIFPNTVAGVIYQPYAFESVLNGEFFNHEPDLEAFKAADAALAG
WDPTGGALYFFNPATSTSWWIWTRPVTTVIGHHWFAR
>Mature_197_residues
MKKVVAVILAFVMAFGVVSQAYAYTKVHVVSRGESLYLIATWYGSDLDSIRQANNKWDNLIYPGEKLLVPIKEDSDHYNY
LVDRYLIAKMIYAEARGESFEGKVAVGAVILNRVKSGIFPNTVAGVIYQPYAFESVLNGEFFNHEPDLEAFKAADAALAG
WDPTGGALYFFNPATSTSWWIWTRPVTTVIGHHWFAR

Specific function: Required for spore cortex hydrolysis during germination [H]

COG id: COG3773

COG function: function code M; Cell wall hydrolyses involved in spore germination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sleB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011105
- InterPro:   IPR002477
- InterPro:   IPR014224 [H]

Pfam domain/function: PF07486 Hydrolase_2; PF01471 PG_binding_1 [H]

EC number: NA

Molecular weight: Translated: 22094; Mature: 22094

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVVAVILAFVMAFGVVSQAYAYTKVHVVSRGESLYLIATWYGSDLDSIRQANNKWDNL
CHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEEECCCCHHHHHHHCCCCCCE
IYPGEKLLVPIKEDSDHYNYLVDRYLIAKMIYAEARGESFEGKVAVGAVILNRVKSGIFP
ECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
NTVAGVIYQPYAFESVLNGEFFNHEPDLEAFKAADAALAGWDPTGGALYFFNPATSTSWW
CHHHHHEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEE
IWTRPVTTVIGHHWFAR
EEECHHHHHHHHHHCCC
>Mature Secondary Structure
MKKVVAVILAFVMAFGVVSQAYAYTKVHVVSRGESLYLIATWYGSDLDSIRQANNKWDNL
CHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEEECCCCHHHHHHHCCCCCCE
IYPGEKLLVPIKEDSDHYNYLVDRYLIAKMIYAEARGESFEGKVAVGAVILNRVKSGIFP
ECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
NTVAGVIYQPYAFESVLNGEFFNHEPDLEAFKAADAALAGWDPTGGALYFFNPATSTSWW
CHHHHHEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEE
IWTRPVTTVIGHHWFAR
EEECHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]