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The map label for this gene is Snz1 [H]

Identifier: 20807305

GI number: 20807305

Start: 829650

End: 830528

Strand: Reverse

Name: Snz1 [H]

Synonym: TTE0823

Alternate gene names: 20807305

Gene position: 830528-829650 (Counterclockwise)

Preceding gene: 20807306

Following gene: 20807304

Centisome position: 30.88

GC content: 41.3

Gene sequence:

>879_bases
ATGAATGAAAGGTATGAGCTAAATAAAAATTTAGCCCAAATGTTAAAAGGTGGCGTTATCATGGATGTGACAACACCAGA
AGAGGCAATTATTGCAGAGAAAGCAGGCGCTGTCGCTGTCATGGCACTTGAAAGAGTTCCAGCCGATATTAGGGCAAGGG
GCGGAGTCGCAAGAATGTCAGACCCTAAAATAATAAAAGAGATAAAGGCAGCAGTATCAATCCCTGTTATGGCGAAAGTT
AGAATTGGGCATTTTGTGGAAGCACAGATTTTAGAGGCACTTGGGATAGATTTTATTGATGAAAGTGAAGTTTTAACACC
TGCAGATGAGATGTACCATATAAACAAATGGGATTTTAAAGTGCCTTTTGTATGTGGTGCAAAAAACCTTGGAGAGGCTT
TAAGGCGCATAGCAGAAGGAGCTTCAATGATAAGAACAAAAGGTGAAGCAGGTACTGGAAATGTAGTAGAAGCTGTAAGG
CATATGAGGATGATAAATGCCGAAATAAAAAGGCTTACAACTTTGGGAGAAGAGGAGCTTATGGCTGCTGCAAAAGAACT
TCAGGCACCCTATGACCTTGTAAAATATGTTGCACAACATGGAAAACTTCCAGTTGTAAATTTCGCAGCAGGAGGCATTG
CTACACCGGCAGACGCGGCACTCATGATGCAGCTTGGTGCAGATGGTGTTTTTGTTGGTTCAGGAATATTTAAATCGCAA
AACCCTGAAAAAATGGCAGCTGCTATAGTAAAAGCTGTAACATATTACGACAAACCAGAAATATTGGCAGAAGTTTCAGA
AGGATTGGGAGAAGCGATGACCGGCATAGACATAAGGCAACTAGAAGAAAAAGATTTATACGCGACAAGGGGATGGTAA

Upstream 100 bases:

>100_bases
TTGTATCTATAATGTTCTGATTGACTTGTTATGATTTAAGAGATACAATTGATATTAGGATACATACAAATACCAACACA
ATTTAAGGAGGAGGAAAACA

Downstream 100 bases:

>100_bases
TTTGCGGGTAGGAGTTTTGGGAGTTCAAGGTTCTGTTAAGGAACATATGGATAAATTAAAGCTTATAAAAGGAATTGAAG
CAGTAGAGGCAAAAGATAAA

Product: pyridoxal biosynthesis lyase PdxS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MNERYELNKNLAQMLKGGVIMDVTTPEEAIIAEKAGAVAVMALERVPADIRARGGVARMSDPKIIKEIKAAVSIPVMAKV
RIGHFVEAQILEALGIDFIDESEVLTPADEMYHINKWDFKVPFVCGAKNLGEALRRIAEGASMIRTKGEAGTGNVVEAVR
HMRMINAEIKRLTTLGEEELMAAAKELQAPYDLVKYVAQHGKLPVVNFAAGGIATPADAALMMQLGADGVFVGSGIFKSQ
NPEKMAAAIVKAVTYYDKPEILAEVSEGLGEAMTGIDIRQLEEKDLYATRGW

Sequences:

>Translated_292_residues
MNERYELNKNLAQMLKGGVIMDVTTPEEAIIAEKAGAVAVMALERVPADIRARGGVARMSDPKIIKEIKAAVSIPVMAKV
RIGHFVEAQILEALGIDFIDESEVLTPADEMYHINKWDFKVPFVCGAKNLGEALRRIAEGASMIRTKGEAGTGNVVEAVR
HMRMINAEIKRLTTLGEEELMAAAKELQAPYDLVKYVAQHGKLPVVNFAAGGIATPADAALMMQLGADGVFVGSGIFKSQ
NPEKMAAAIVKAVTYYDKPEILAEVSEGLGEAMTGIDIRQLEEKDLYATRGW
>Mature_292_residues
MNERYELNKNLAQMLKGGVIMDVTTPEEAIIAEKAGAVAVMALERVPADIRARGGVARMSDPKIIKEIKAAVSIPVMAKV
RIGHFVEAQILEALGIDFIDESEVLTPADEMYHINKWDFKVPFVCGAKNLGEALRRIAEGASMIRTKGEAGTGNVVEAVR
HMRMINAEIKRLTTLGEEELMAAAKELQAPYDLVKYVAQHGKLPVVNFAAGGIATPADAALMMQLGADGVFVGSGIFKSQ
NPEKMAAAIVKAVTYYDKPEILAEVSEGLGEAMTGIDIRQLEEKDLYATRGW

Specific function: Involved in the production of pyridoxal phosphate, probably by incorporating ammonia into the pyridine ring [H]

COG id: COG0214

COG function: function code H; Pyridoxine biosynthesis enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pdxS/SNZ family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321049, Length=283, Percent_Identity=68.1978798586572, Blast_Score=382, Evalue=1e-107,
Organism=Saccharomyces cerevisiae, GI6323996, Length=283, Percent_Identity=67.8445229681979, Blast_Score=381, Evalue=1e-107,
Organism=Saccharomyces cerevisiae, GI6323743, Length=280, Percent_Identity=66.7857142857143, Blast_Score=377, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011060
- InterPro:   IPR001852 [H]

Pfam domain/function: PF01680 SOR_SNZ [H]

EC number: NA

Molecular weight: Translated: 31627; Mature: 31627

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS01235 PDXS_SNZ_1 ; PS51129 PDXS_SNZ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNERYELNKNLAQMLKGGVIMDVTTPEEAIIAEKAGAVAVMALERVPADIRARGGVARMS
CCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCHHEEHHHHHCCHHHHHCCCCCCCC
DPKIIKEIKAAVSIPVMAKVRIGHFVEAQILEALGIDFIDESEVLTPADEMYHINKWDFK
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCEE
VPFVCGAKNLGEALRRIAEGASMIRTKGEAGTGNVVEAVRHMRMINAEIKRLTTLGEEEL
CCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
MAAAKELQAPYDLVKYVAQHGKLPVVNFAAGGIATPADAALMMQLGADGVFVGSGIFKSQ
HHHHHHHCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEECCCCCCCC
NPEKMAAAIVKAVTYYDKPEILAEVSEGLGEAMTGIDIRQLEEKDLYATRGW
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNERYELNKNLAQMLKGGVIMDVTTPEEAIIAEKAGAVAVMALERVPADIRARGGVARMS
CCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCCHHEEHHHHHCCHHHHHCCCCCCCC
DPKIIKEIKAAVSIPVMAKVRIGHFVEAQILEALGIDFIDESEVLTPADEMYHINKWDFK
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEECCCCCEE
VPFVCGAKNLGEALRRIAEGASMIRTKGEAGTGNVVEAVRHMRMINAEIKRLTTLGEEEL
CCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
MAAAKELQAPYDLVKYVAQHGKLPVVNFAAGGIATPADAALMMQLGADGVFVGSGIFKSQ
HHHHHHHCCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEECCCCCCCC
NPEKMAAAIVKAVTYYDKPEILAEVSEGLGEAMTGIDIRQLEEKDLYATRGW
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA