| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is yvdM [H]
Identifier: 20807284
GI number: 20807284
Start: 800201
End: 800851
Strand: Direct
Name: yvdM [H]
Synonym: TTE0802
Alternate gene names: 20807284
Gene position: 800201-800851 (Clockwise)
Preceding gene: 20807283
Following gene: 20807285
Centisome position: 29.75
GC content: 37.33
Gene sequence:
>651_bases ATGTCAAAATATGAGGCAGTTATTTTTGACCTGGATGGAGTGATAACAGATACAGCAAGGTATCACTACCTTGCATGGAA GAAACTCGCTGATGAGCTGGGGATATATTTTGATGAAGTTATAAATGAGAGGTTAAAGGGAGTAAGCAGGTTAGAGTCTT TGGAGATAATTCTAGAGAGGAGCCAAAAACAATATTCCCAAGATGAAAAGGAGTATCTTGCAAATAAGAAGAATGAATAC TACAAAGAGATGATTAAAAAGATTACTCCAGAGGATTTGCTTCCAGGGGTAGAAAAGTTTATTGAGGAACTTAAAAAAAG AGGAATTAAGACGGCAATTGCATCAGTTAGCAAGAATGCCTTTACTGTAGTGGAAAATTTGAAGATAAAAGACAAATTTG ACTATATTGTGGATGCCAATGAAATAAAGCGCGGCAAACCTGATCCGGAGATATTTTTAAATGCAGCAGAACATCTTGGA ATTTCTCCTGAAAAATGTATAGGAATAGAAGACTCTGCAGCAGGTATCACTGCTATAAAAAGGGCAGGGATGTTTGCGGT TGGAGTAGGCAATCCTGAGACGGTAAAAGAGGCGGATTTGATTTTAAAAGATATGACAGAGGCAGGTAAGATATTGGAAC TACTGGATTAA
Upstream 100 bases:
>100_bases TTGACATTGCCGACTATAGTAATATTCCTCATATTCCAGAGATATTTTGTTAGAGGTATTGCAACAACAGGATTAAAGTA ATTTACAGAGGGGGATGAAA
Downstream 100 bases:
>100_bases ATTCCCCTTTTAAAAAGGGGAATAATTTTTTATAAATTCCTCTTGAAATTTTGTGAAGATGATAATATAATATAACTGTA AGCGGTTACAGTAAATCTGG
Product: phosphatase/phosphohexomutase
Products: NA
Alternate protein names: Beta-PGM [H]
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MSKYEAVIFDLDGVITDTARYHYLAWKKLADELGIYFDEVINERLKGVSRLESLEIILERSQKQYSQDEKEYLANKKNEY YKEMIKKITPEDLLPGVEKFIEELKKRGIKTAIASVSKNAFTVVENLKIKDKFDYIVDANEIKRGKPDPEIFLNAAEHLG ISPEKCIGIEDSAAGITAIKRAGMFAVGVGNPETVKEADLILKDMTEAGKILELLD
Sequences:
>Translated_216_residues MSKYEAVIFDLDGVITDTARYHYLAWKKLADELGIYFDEVINERLKGVSRLESLEIILERSQKQYSQDEKEYLANKKNEY YKEMIKKITPEDLLPGVEKFIEELKKRGIKTAIASVSKNAFTVVENLKIKDKFDYIVDANEIKRGKPDPEIFLNAAEHLG ISPEKCIGIEDSAAGITAIKRAGMFAVGVGNPETVKEADLILKDMTEAGKILELLD >Mature_215_residues SKYEAVIFDLDGVITDTARYHYLAWKKLADELGIYFDEVINERLKGVSRLESLEIILERSQKQYSQDEKEYLANKKNEYY KEMIKKITPEDLLPGVEKFIEELKKRGIKTAIASVSKNAFTVVENLKIKDKFDYIVDANEIKRGKPDPEIFLNAAEHLGI SPEKCIGIEDSAAGITAIKRAGMFAVGVGNPETVKEADLILKDMTEAGKILELLD
Specific function: Reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=192, Percent_Identity=32.2916666666667, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI207113149, Length=217, Percent_Identity=29.9539170506912, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI296011028, Length=185, Percent_Identity=29.1891891891892, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI296011030, Length=194, Percent_Identity=30.9278350515464, Blast_Score=69, Evalue=4e-12, Organism=Escherichia coli, GI1787576, Length=190, Percent_Identity=45.7894736842105, Blast_Score=183, Evalue=7e-48, Organism=Escherichia coli, GI1789046, Length=188, Percent_Identity=30.8510638297872, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1788021, Length=221, Percent_Identity=26.6968325791855, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI87082080, Length=215, Percent_Identity=27.906976744186, Blast_Score=64, Evalue=8e-12, Organism=Drosophila melanogaster, GI45550911, Length=194, Percent_Identity=30.4123711340206, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI116008157, Length=214, Percent_Identity=27.1028037383178, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI17137324, Length=205, Percent_Identity=25.3658536585366, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010976 - InterPro: IPR010972 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =5.4.2.6 [H]
Molecular weight: Translated: 24421; Mature: 24290
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKYEAVIFDLDGVITDTARYHYLAWKKLADELGIYFDEVINERLKGVSRLESLEIILER CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQKQYSQDEKEYLANKKNEYYKEMIKKITPEDLLPGVEKFIEELKKRGIKTAIASVSKNA HHHHHCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCH FTVVENLKIKDKFDYIVDANEIKRGKPDPEIFLNAAEHLGISPEKCIGIEDSAAGITAIK HHHHHCCCCCCHHHHEECHHHHHCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHH RAGMFAVGVGNPETVKEADLILKDMTEAGKILELLD HCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKYEAVIFDLDGVITDTARYHYLAWKKLADELGIYFDEVINERLKGVSRLESLEIILER CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQKQYSQDEKEYLANKKNEYYKEMIKKITPEDLLPGVEKFIEELKKRGIKTAIASVSKNA HHHHHCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCH FTVVENLKIKDKFDYIVDANEIKRGKPDPEIFLNAAEHLGISPEKCIGIEDSAAGITAIK HHHHHCCCCCCHHHHEECHHHHHCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHH RAGMFAVGVGNPETVKEADLILKDMTEAGKILELLD HCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]