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The map label for this gene is UbiB2

Identifier: 20807181

GI number: 20807181

Start: 698941

End: 699819

Strand: Reverse

Name: UbiB2

Synonym: TTE0694

Alternate gene names: NA

Gene position: 699819-698941 (Counterclockwise)

Preceding gene: 20807182

Following gene: 20807180

Centisome position: 26.02

GC content: 40.61

Gene sequence:

>879_bases
ATGTTCAAAATTTTAGAAAAAAGAGAATTGGCACCTTCCATCAAGTTGTTTGTAATAGAGGCACCACTAGTAGCCAAAAA
AGCAAGGCCAGGCCAATTCGTTATGCTAAGGATAAAAGAAGGAGGAGAAAGAATTCCTCTTACCATTGCAGATTACAATT
CAGAAAATGGCACTGTCACAATAGTATTCCAAGAAGTAGGTAAAACCACACGGGAATTAGGAACTCTAGAAGCTGGAGAC
TATATCCAGGACTTTGTTGGGCCTTTAGGTGTGCCGGTGGAGTTTCCTAATCACAAGAAAGTTTTAGGAATAGGCGGAGG
CCTTGGTATTGCTCCACTTTATCCTAAACTCAAAATGCTTCATCAACAGGGGGTAGAAGTAGTTTCTATTATAGGTGCTA
GGACAGCTGAATTGCTAATCTTGGAAGAAGAGATAAAAGCTGTTAGCGACAGGATGTATATCTGCACCGACGACGGCTCA
AAAGGTCGCCATGGGTTTGTCACAGTAGTACTTAAAGAGCTTTTAGAACAAGGTGAAAAATTTGATGAGATTATTATCAT
AGGTCCCCCGATTTTGATGAAAATAGGAAGCGAAATTACCAAGCCTTATGGCATACCCACGATGGTGAGCCTTAATCCCA
TAATGGTAGATGGCACAGGCATGTGCGGTGGGTGCCGTGTCACCGTAGACGGAGAAATCAAATTTGCTTGCGTTGATGGT
CCGGCTTTCGACGGCCATAAAGTAGATTTCGATGAACTAATAAAAAGATTGGCCACTTATAAAGAGGAAGAAAAAATTTC
CCTCGAAAGATTTAATGAAGTTCATGAGTGCAAATTAATCAACAAAATAGAAGGAGTTGATAAAGATGCCGTTAAATAG

Upstream 100 bases:

>100_bases
AAAAAATAGTTATTTTCTTAACATTTTTACACCATTAACACTTGATAACATCATCGAAGTAAATAAACAACTATTAAATA
AAAGAAGAAGGAGGATTATC

Downstream 100 bases:

>100_bases
AAGCAAAAAGAAAACACCCATGCCTACCCAAAAGCCTGAAGTCCGCAGGCGTAATTTTAACGAAGTAGCTTTGGGCTATT
CGGAAGAGGAGGCAGTAAGT

Product: ferredoxin-NADP(+) reductase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MFKILEKRELAPSIKLFVIEAPLVAKKARPGQFVMLRIKEGGERIPLTIADYNSENGTVTIVFQEVGKTTRELGTLEAGD
YIQDFVGPLGVPVEFPNHKKVLGIGGGLGIAPLYPKLKMLHQQGVEVVSIIGARTAELLILEEEIKAVSDRMYICTDDGS
KGRHGFVTVVLKELLEQGEKFDEIIIIGPPILMKIGSEITKPYGIPTMVSLNPIMVDGTGMCGGCRVTVDGEIKFACVDG
PAFDGHKVDFDELIKRLATYKEEEKISLERFNEVHECKLINKIEGVDKDAVK

Sequences:

>Translated_292_residues
MFKILEKRELAPSIKLFVIEAPLVAKKARPGQFVMLRIKEGGERIPLTIADYNSENGTVTIVFQEVGKTTRELGTLEAGD
YIQDFVGPLGVPVEFPNHKKVLGIGGGLGIAPLYPKLKMLHQQGVEVVSIIGARTAELLILEEEIKAVSDRMYICTDDGS
KGRHGFVTVVLKELLEQGEKFDEIIIIGPPILMKIGSEITKPYGIPTMVSLNPIMVDGTGMCGGCRVTVDGEIKFACVDG
PAFDGHKVDFDELIKRLATYKEEEKISLERFNEVHECKLINKIEGVDKDAVK
>Mature_292_residues
MFKILEKRELAPSIKLFVIEAPLVAKKARPGQFVMLRIKEGGERIPLTIADYNSENGTVTIVFQEVGKTTRELGTLEAGD
YIQDFVGPLGVPVEFPNHKKVLGIGGGLGIAPLYPKLKMLHQQGVEVVSIIGARTAELLILEEEIKAVSDRMYICTDDGS
KGRHGFVTVVLKELLEQGEKFDEIIIIGPPILMKIGSEITKPYGIPTMVSLNPIMVDGTGMCGGCRVTVDGEIKFACVDG
PAFDGHKVDFDELIKRLATYKEEEKISLERFNEVHECKLINKIEGVDKDAVK

Specific function: Unknown

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 32123; Mature: 32123

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKILEKRELAPSIKLFVIEAPLVAKKARPGQFVMLRIKEGGERIPLTIADYNSENGTVT
CCCCCCHHHCCCCEEEEEEECCHHHCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCEEE
IVFQEVGKTTRELGTLEAGDYIQDFVGPLGVPVEFPNHKKVLGIGGGLGIAPLYPKLKML
EEEHHHCCHHHHHCCCCCCHHHHHHHCCCCCCEECCCCCEEEEECCCCCCCCCCHHHHHH
HQQGVEVVSIIGARTAELLILEEEIKAVSDRMYICTDDGSKGRHGFVTVVLKELLEQGEK
HHCCCCEEEHHCCCCEEEEEEHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHCCCC
FDEIIIIGPPILMKIGSEITKPYGIPTMVSLNPIMVDGTGMCGGCRVTVDGEIKFACVDG
CCEEEEECCHHHHHHHHHHCCCCCCCEEEECCEEEEECCCCCCCEEEEECCCEEEEEECC
PAFDGHKVDFDELIKRLATYKEEEKISLERFNEVHECKLINKIEGVDKDAVK
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure
MFKILEKRELAPSIKLFVIEAPLVAKKARPGQFVMLRIKEGGERIPLTIADYNSENGTVT
CCCCCCHHHCCCCEEEEEEECCHHHCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCEEE
IVFQEVGKTTRELGTLEAGDYIQDFVGPLGVPVEFPNHKKVLGIGGGLGIAPLYPKLKML
EEEHHHCCHHHHHCCCCCCHHHHHHHCCCCCCEECCCCCEEEEECCCCCCCCCCHHHHHH
HQQGVEVVSIIGARTAELLILEEEIKAVSDRMYICTDDGSKGRHGFVTVVLKELLEQGEK
HHCCCCEEEHHCCCCEEEEEEHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHCCCC
FDEIIIIGPPILMKIGSEITKPYGIPTMVSLNPIMVDGTGMCGGCRVTVDGEIKFACVDG
CCEEEEECCHHHHHHHHHHCCCCCCCEEEECCEEEEECCCCCCCEEEEECCCEEEEEECC
PAFDGHKVDFDELIKRLATYKEEEKISLERFNEVHECKLINKIEGVDKDAVK
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA