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The map label for this gene is AcoR [H]

Identifier: 20807174

GI number: 20807174

Start: 690256

End: 692280

Strand: Direct

Name: AcoR [H]

Synonym: TTE0687

Alternate gene names: 20807174

Gene position: 690256-692280 (Clockwise)

Preceding gene: 20807173

Following gene: 20807175

Centisome position: 25.67

GC content: 38.81

Gene sequence:

>2025_bases
ATGAAAGAAAATTTTTATGGAGTTTATGAAGAAGTATGGCATCAATGGAACGACTTTCAAAACACCATGACTATCTCAAA
ACAAATCGTTAGATCGGAAATACTTAAATCTTGGGAAAGGTGCAAAATTGCAGGCGTCAATCCGTACCAGGAACAAGGAC
AAGAGATTATCGAGGGTTCTGCTTTAAAAGAAGCCAGAGAAAGACAAGAAGAACTAATTCAAGCTGCTAGGCCGGTTATG
GAAAAGCTTTTATCGCTGTCCAGTGACTATGGTTTTCTCGCAGTTTTAGTAGGAGAGGACGGTTATATATTAGAAACATT
AGGGAATAACAAGGAAACTATAGACCTAGCTCGGAAAACCAATTTCATTCCCGGTGCATGCTGGCGAGAAGATAAAGTTG
GCACTAACGGGATAGGAACCGCAATGGTTATAGGACAAGCCCTTGATGTAACTGGGGCTGAGCACTTTTGCCGTGGACTT
CACTCTTGGACATGTGCTAGTTCTCCAATTTTTAGTCCGGAAGGAAAACTTATTGGAGTTATTGACCTTTCGGGACCTTG
GTACCGAGAAAATAAACTGGCATTAGCTACTATAGTATCTTCTGCAATTGCGATTGAAAACAATTTGAAGCAGAGTAAAG
CCTTTAAAGAAACTTTAACTTACAGACAACTCTCAGAATACTTCTTAGAAAGCAACCCTGATCCCTTATTAGTGATAGAT
AATACAGGAAGATTAGTCAAGGTTAATTATGCATCTGAGAAAGTTTTGGGATGGAAAAAAGAAGATTTAATAGGACGAAA
AGCTGATGAAATATTTGACAATTCGCAGGAAATCCTATTCCTCATAAAAGCGCGGCAGAGTGTAAAAAACAAGGAAATAT
TAGTGCAAAGTAGAAAAGGTATCTTGCGGTGTAGCGCAGATGTTTCACCTATAAGTGGTTATTACAATGAAAATGTAGCG
GCTCTAATAGCTCTAAAAATGCATGAAGGTAGTCAATTTTATATAAGCTCTCCTCCAGCCTTAAAAGGATTCGAAGTAAT
ATTAGGGAATCATCCCTGTTTGCGTGAAAGCATACGATTAGCTCAAATTGCAGCAAAGAGCGATGCACCAGTTCTCATTT
TAGGAGAGACAGGGACAGGGAAAGACCTTTTTGCAAGAGCCATTCATGAGGCTAGCGGTAGAAAAGGACCTTTTGTGGCG
ATAAATTGCGGTGCTTTGCCGCGAGAATTAATTGGAAGTGAGCTTTTCGGCTATGTAGGTGGGGCTTTTACCGGTGCACG
GCCAGAGGGCAAGCCAGGCAAATTTGAACAAGCCCAAGGAGGTACTTTATTTTTAGACGAAATAGGCGATATGCCTATGG
ATATACAGGTTTACCTTTTACGAGTGTTGGAAGAAAAAAAGGTAGTTCGAATAGGCGGGCATAAAGAGATACCGTTAGAT
GTTCGAATTATTGCTGCGACCAATTCGGATTTAACGAAGTTAGTAAAAGAGAAAAAATTCCGAGAGGATTTGTATTTTCG
CCTGAGAGTTCTCACTATTCATTTATGCCCGTTACGAGAACGCAAAAGTGATATACCTCTTCTTTTTCAACATTTTGTTA
ATAAATTTTCACAAAAATTAGGTAAAACTATTACCAATATTGATCCATCAGTTTGGTCTTTATTAAACAATTACGACTGG
CCAGGAAACATTAGGGAATTACGAAATGTGGCAGAATGGGCAGTGAATATAGCAGAGGATAATACAATTTCTGCTAGTCA
TTTGCCGTCTTACTTATCTGGTTCTCAAACTATACGCGAGGACAGTAATAGCTTTTCTTCTACCTCTCTTGTTGAACTGG
AAAAGCAGGAGATTAGTCGACTTCTCGAACATTATGGAGGTAATATAACTAAAGTTGCTAAAGCCTTAGGCATAGCACGG
AACACCTTGTATAGGAAGCTTTATAAATATGGACTAAAGACTCGTTATAGTGTTCCAAAATCTAACGTTACAAAAAGAGA
CATAAGTTACAAAGAAGCAAATTAA

Upstream 100 bases:

>100_bases
TTCTTTTTCTCAAATCTATTTGTATCAAGTATTGTAAGGTTTGATAACTCCCTAAATTAGGGGTTTATCTTGATATAACG
TGGTACGGGGGGAGAGGTGA

Downstream 100 bases:

>100_bases
GATTTCATAATTTCTCGTAAAAATCAAGAGTTAAATATGCCAGCACTCAATAATGGGTGCTGGCATATTTTTTGCAAGAA
TATATTTAATGCAAAATGCA

Product: putative regulator of acetoin metabolism

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 674; Mature: 674

Protein sequence:

>674_residues
MKENFYGVYEEVWHQWNDFQNTMTISKQIVRSEILKSWERCKIAGVNPYQEQGQEIIEGSALKEARERQEELIQAARPVM
EKLLSLSSDYGFLAVLVGEDGYILETLGNNKETIDLARKTNFIPGACWREDKVGTNGIGTAMVIGQALDVTGAEHFCRGL
HSWTCASSPIFSPEGKLIGVIDLSGPWYRENKLALATIVSSAIAIENNLKQSKAFKETLTYRQLSEYFLESNPDPLLVID
NTGRLVKVNYASEKVLGWKKEDLIGRKADEIFDNSQEILFLIKARQSVKNKEILVQSRKGILRCSADVSPISGYYNENVA
ALIALKMHEGSQFYISSPPALKGFEVILGNHPCLRESIRLAQIAAKSDAPVLILGETGTGKDLFARAIHEASGRKGPFVA
INCGALPRELIGSELFGYVGGAFTGARPEGKPGKFEQAQGGTLFLDEIGDMPMDIQVYLLRVLEEKKVVRIGGHKEIPLD
VRIIAATNSDLTKLVKEKKFREDLYFRLRVLTIHLCPLRERKSDIPLLFQHFVNKFSQKLGKTITNIDPSVWSLLNNYDW
PGNIRELRNVAEWAVNIAEDNTISASHLPSYLSGSQTIREDSNSFSSTSLVELEKQEISRLLEHYGGNITKVAKALGIAR
NTLYRKLYKYGLKTRYSVPKSNVTKRDISYKEAN

Sequences:

>Translated_674_residues
MKENFYGVYEEVWHQWNDFQNTMTISKQIVRSEILKSWERCKIAGVNPYQEQGQEIIEGSALKEARERQEELIQAARPVM
EKLLSLSSDYGFLAVLVGEDGYILETLGNNKETIDLARKTNFIPGACWREDKVGTNGIGTAMVIGQALDVTGAEHFCRGL
HSWTCASSPIFSPEGKLIGVIDLSGPWYRENKLALATIVSSAIAIENNLKQSKAFKETLTYRQLSEYFLESNPDPLLVID
NTGRLVKVNYASEKVLGWKKEDLIGRKADEIFDNSQEILFLIKARQSVKNKEILVQSRKGILRCSADVSPISGYYNENVA
ALIALKMHEGSQFYISSPPALKGFEVILGNHPCLRESIRLAQIAAKSDAPVLILGETGTGKDLFARAIHEASGRKGPFVA
INCGALPRELIGSELFGYVGGAFTGARPEGKPGKFEQAQGGTLFLDEIGDMPMDIQVYLLRVLEEKKVVRIGGHKEIPLD
VRIIAATNSDLTKLVKEKKFREDLYFRLRVLTIHLCPLRERKSDIPLLFQHFVNKFSQKLGKTITNIDPSVWSLLNNYDW
PGNIRELRNVAEWAVNIAEDNTISASHLPSYLSGSQTIREDSNSFSSTSLVELEKQEISRLLEHYGGNITKVAKALGIAR
NTLYRKLYKYGLKTRYSVPKSNVTKRDISYKEAN
>Mature_674_residues
MKENFYGVYEEVWHQWNDFQNTMTISKQIVRSEILKSWERCKIAGVNPYQEQGQEIIEGSALKEARERQEELIQAARPVM
EKLLSLSSDYGFLAVLVGEDGYILETLGNNKETIDLARKTNFIPGACWREDKVGTNGIGTAMVIGQALDVTGAEHFCRGL
HSWTCASSPIFSPEGKLIGVIDLSGPWYRENKLALATIVSSAIAIENNLKQSKAFKETLTYRQLSEYFLESNPDPLLVID
NTGRLVKVNYASEKVLGWKKEDLIGRKADEIFDNSQEILFLIKARQSVKNKEILVQSRKGILRCSADVSPISGYYNENVA
ALIALKMHEGSQFYISSPPALKGFEVILGNHPCLRESIRLAQIAAKSDAPVLILGETGTGKDLFARAIHEASGRKGPFVA
INCGALPRELIGSELFGYVGGAFTGARPEGKPGKFEQAQGGTLFLDEIGDMPMDIQVYLLRVLEEKKVVRIGGHKEIPLD
VRIIAATNSDLTKLVKEKKFREDLYFRLRVLTIHLCPLRERKSDIPLLFQHFVNKFSQKLGKTITNIDPSVWSLLNNYDW
PGNIRELRNVAEWAVNIAEDNTISASHLPSYLSGSQTIREDSNSFSSTSLVELEKQEISRLLEHYGGNITKVAKALGIAR
NTLYRKLYKYGLKTRYSVPKSNVTKRDISYKEAN

Specific function: Unknown

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI1789233, Length=432, Percent_Identity=37.962962962963, Blast_Score=273, Evalue=3e-74,
Organism=Escherichia coli, GI1788550, Length=321, Percent_Identity=46.417445482866, Blast_Score=264, Evalue=1e-71,
Organism=Escherichia coli, GI1790299, Length=331, Percent_Identity=41.9939577039275, Blast_Score=253, Evalue=3e-68,
Organism=Escherichia coli, GI1790437, Length=304, Percent_Identity=45.0657894736842, Blast_Score=252, Evalue=5e-68,
Organism=Escherichia coli, GI87082117, Length=307, Percent_Identity=45.2768729641694, Blast_Score=251, Evalue=1e-67,
Organism=Escherichia coli, GI1789087, Length=317, Percent_Identity=42.9022082018927, Blast_Score=246, Evalue=4e-66,
Organism=Escherichia coli, GI1788905, Length=313, Percent_Identity=41.85303514377, Blast_Score=236, Evalue=5e-63,
Organism=Escherichia coli, GI1786524, Length=315, Percent_Identity=41.9047619047619, Blast_Score=230, Evalue=2e-61,
Organism=Escherichia coli, GI1787583, Length=434, Percent_Identity=32.7188940092166, Blast_Score=227, Evalue=2e-60,
Organism=Escherichia coli, GI87081858, Length=633, Percent_Identity=28.436018957346, Blast_Score=223, Evalue=2e-59,
Organism=Escherichia coli, GI87082152, Length=317, Percent_Identity=38.4858044164038, Blast_Score=197, Evalue=2e-51,
Organism=Escherichia coli, GI87081872, Length=231, Percent_Identity=45.021645021645, Blast_Score=192, Evalue=6e-50,
Organism=Escherichia coli, GI1789828, Length=299, Percent_Identity=34.1137123745819, Blast_Score=144, Evalue=3e-35,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00989 PAS; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 75503; Mature: 75503

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS50112 PAS ; PS00675 SIGMA54_INTERACT_1 ; PS00676 SIGMA54_INTERACT_2 ; PS00688 SIGMA54_INTERACT_3 ; PS50045 SIGMA54_INTERACT_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENFYGVYEEVWHQWNDFQNTMTISKQIVRSEILKSWERCKIAGVNPYQEQGQEIIEGS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCH
ALKEARERQEELIQAARPVMEKLLSLSSDYGFLAVLVGEDGYILETLGNNKETIDLARKT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCEEEHHHHC
NFIPGACWREDKVGTNGIGTAMVIGQALDVTGAEHFCRGLHSWTCASSPIFSPEGKLIGV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEE
IDLSGPWYRENKLALATIVSSAIAIENNLKQSKAFKETLTYRQLSEYFLESNPDPLLVID
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
NTGRLVKVNYASEKVLGWKKEDLIGRKADEIFDNSQEILFLIKARQSVKNKEILVQSRKG
CCCCEEEEECCCCHHCCCCHHHHCCCCHHHHHCCCCCEEEEEEHHHCCCCHHHHHHHCCC
ILRCSADVSPISGYYNENVAALIALKMHEGSQFYISSPPALKGFEVILGNHPCLRESIRL
EEEECCCCCCCCCCCCCCEEEEEEEEEECCCEEEECCCCCCCCEEEEECCCHHHHHHHHH
AQIAAKSDAPVLILGETGTGKDLFARAIHEASGRKGPFVAINCGALPRELIGSELFGYVG
HHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHC
GAFTGARPEGKPGKFEQAQGGTLFLDEIGDMPMDIQVYLLRVLEEKKVVRIGGHKEIPLD
CCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCCCEE
VRIIAATNSDLTKLVKEKKFREDLYFRLRVLTIHLCPLRERKSDIPLLFQHFVNKFSQKL
EEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
GKTITNIDPSVWSLLNNYDWPGNIRELRNVAEWAVNIAEDNTISASHLPSYLSGSQTIRE
CCHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCHHHCCCHHHHH
DSNSFSSTSLVELEKQEISRLLEHYGGNITKVAKALGIARNTLYRKLYKYGLKTRYSVPK
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SNVTKRDISYKEAN
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKENFYGVYEEVWHQWNDFQNTMTISKQIVRSEILKSWERCKIAGVNPYQEQGQEIIEGS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCH
ALKEARERQEELIQAARPVMEKLLSLSSDYGFLAVLVGEDGYILETLGNNKETIDLARKT
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCEEEHHHHC
NFIPGACWREDKVGTNGIGTAMVIGQALDVTGAEHFCRGLHSWTCASSPIFSPEGKLIGV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEE
IDLSGPWYRENKLALATIVSSAIAIENNLKQSKAFKETLTYRQLSEYFLESNPDPLLVID
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
NTGRLVKVNYASEKVLGWKKEDLIGRKADEIFDNSQEILFLIKARQSVKNKEILVQSRKG
CCCCEEEEECCCCHHCCCCHHHHCCCCHHHHHCCCCCEEEEEEHHHCCCCHHHHHHHCCC
ILRCSADVSPISGYYNENVAALIALKMHEGSQFYISSPPALKGFEVILGNHPCLRESIRL
EEEECCCCCCCCCCCCCCEEEEEEEEEECCCEEEECCCCCCCCEEEEECCCHHHHHHHHH
AQIAAKSDAPVLILGETGTGKDLFARAIHEASGRKGPFVAINCGALPRELIGSELFGYVG
HHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHC
GAFTGARPEGKPGKFEQAQGGTLFLDEIGDMPMDIQVYLLRVLEEKKVVRIGGHKEIPLD
CCCCCCCCCCCCCCCCCCCCCEEEHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCCCEE
VRIIAATNSDLTKLVKEKKFREDLYFRLRVLTIHLCPLRERKSDIPLLFQHFVNKFSQKL
EEEEEECCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
GKTITNIDPSVWSLLNNYDWPGNIRELRNVAEWAVNIAEDNTISASHLPSYLSGSQTIRE
CCHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCHHHCCCHHHHH
DSNSFSSTSLVELEKQEISRLLEHYGGNITKVAKALGIARNTLYRKLYKYGLKTRYSVPK
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SNVTKRDISYKEAN
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA