| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is WecE2 [C]
Identifier: 20807158
GI number: 20807158
Start: 668742
End: 669860
Strand: Direct
Name: WecE2 [C]
Synonym: TTE0667
Alternate gene names: 20807158
Gene position: 668742-669860 (Clockwise)
Preceding gene: 20807157
Following gene: 20807159
Centisome position: 24.87
GC content: 34.32
Gene sequence:
>1119_bases ATGAAGGTTCCTTTATCAAGACCAGATATTACCCAAAAAGAAATCGACGCAGTTGTAGAAGTTTTAAGGTCGGATATTTT AAGCATTGGACCCAAGATAGAAGAATTTGAAAGAAAGATAGCTGATTACGTAGGGAAAAAATATGCGATTGCAGTGAATA GTGGGACAAGCGCCTTGCATTTAATAGTAAGGGCATTGGGTATAAAAGATGGAGATGAAGTTATAACTACACCTTTTACT TTTATAGCATCTGTAAACTGTTTTTTATTTGAAAGGGCAAAGCCTGTTTTTGTGGATATAGATCCAGACACACTGAACAT GGATATTAACAAAATAGAAGAAAAAATAACAGAAAAAACCAAAGCAATTTTAACAGTAGATGTTTTTGGACAACCAATGG ACATGGAGAAGGTAAATGAGATAGCTAAAAAATATGGACTTAAAGTTATTGAAGATTCTTGCGAGGCGTTAGGTTCAGAA TACAAAGGTATTAAAGCGGGAACATTGTGTGATGCAGGTGCTTTTGCTTTTTATCCTAATAAACAGATTACAACTGCTGA AGGAGGGGTAATTGTCACAGATGATGAAGAAATCGCACAATTGTGTAGAAGCATGAGAAGTCAGGGAAGGCCCATTACAG GATTGTGGCTAGAACATGAGAGGTTGGGGTTTAATTATCGTTTGAGTGAGTTACATGCTGCTCTTGGAATAGTGCAGTTA GAAAGGATAGAAGAGATAATTAAAAGGCGTTTAGAAATAGCTGAAAAATATAATGAACGATTGAAAGATGTCAAGGGAGT TAAAATACCATACATTGCTCCTGAAGTAAATAAAATGAGTTGGTTCGTCTATGTGATAAGAGTAGATGAAAACATAGACA GAGATAAGGTTATGCAGTATTTAATTGACAATGGTATAGGTTGTAGACCTTATTTTACGCCAGTACATTTACAATCTTAC ATAAAGGAATTAACTGGCCATAAAGAAGGAGATTTTCCTATAACAGAGAAAGTGGCAAGATCTACAATAGCTTTACCTTT TTTCAATAAAATAACAGATGAACAAATTGATTATGTAGTCGATAAGTTAAAAGAGGCAATAAAGATATATAGTAGGTAA
Upstream 100 bases:
>100_bases TATAGGTGCAGGAGCGGTAGTTGTTGATGATATACCACCTTATTGTACAGCAGTAGGAGTTCCAGCAAAACCAATAAAAT TTCATGAGGAGGCTAAATAA
Downstream 100 bases:
>100_bases ATGGGAGAGATTTATATGTGGAAAAACAAGAGAAAAATTTTATTATTGCTTATTGACATTATCCTATTGAATATAGCATA TTTTCTAGCTTTTTATTTGC
Product: cell wall biogenesis regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MKVPLSRPDITQKEIDAVVEVLRSDILSIGPKIEEFERKIADYVGKKYAIAVNSGTSALHLIVRALGIKDGDEVITTPFT FIASVNCFLFERAKPVFVDIDPDTLNMDINKIEEKITEKTKAILTVDVFGQPMDMEKVNEIAKKYGLKVIEDSCEALGSE YKGIKAGTLCDAGAFAFYPNKQITTAEGGVIVTDDEEIAQLCRSMRSQGRPITGLWLEHERLGFNYRLSELHAALGIVQL ERIEEIIKRRLEIAEKYNERLKDVKGVKIPYIAPEVNKMSWFVYVIRVDENIDRDKVMQYLIDNGIGCRPYFTPVHLQSY IKELTGHKEGDFPITEKVARSTIALPFFNKITDEQIDYVVDKLKEAIKIYSR
Sequences:
>Translated_372_residues MKVPLSRPDITQKEIDAVVEVLRSDILSIGPKIEEFERKIADYVGKKYAIAVNSGTSALHLIVRALGIKDGDEVITTPFT FIASVNCFLFERAKPVFVDIDPDTLNMDINKIEEKITEKTKAILTVDVFGQPMDMEKVNEIAKKYGLKVIEDSCEALGSE YKGIKAGTLCDAGAFAFYPNKQITTAEGGVIVTDDEEIAQLCRSMRSQGRPITGLWLEHERLGFNYRLSELHAALGIVQL ERIEEIIKRRLEIAEKYNERLKDVKGVKIPYIAPEVNKMSWFVYVIRVDENIDRDKVMQYLIDNGIGCRPYFTPVHLQSY IKELTGHKEGDFPITEKVARSTIALPFFNKITDEQIDYVVDKLKEAIKIYSR >Mature_372_residues MKVPLSRPDITQKEIDAVVEVLRSDILSIGPKIEEFERKIADYVGKKYAIAVNSGTSALHLIVRALGIKDGDEVITTPFT FIASVNCFLFERAKPVFVDIDPDTLNMDINKIEEKITEKTKAILTVDVFGQPMDMEKVNEIAKKYGLKVIEDSCEALGSE YKGIKAGTLCDAGAFAFYPNKQITTAEGGVIVTDDEEIAQLCRSMRSQGRPITGLWLEHERLGFNYRLSELHAALGIVQL ERIEEIIKRRLEIAEKYNERLKDVKGVKIPYIAPEVNKMSWFVYVIRVDENIDRDKVMQYLIDNGIGCRPYFTPVHLQSY IKELTGHKEGDFPITEKVARSTIALPFFNKITDEQIDYVVDKLKEAIKIYSR
Specific function: Unknown
COG id: COG0399
COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the degT/dnrJ/eryC1 family [H]
Homologues:
Organism=Escherichia coli, GI145693159, Length=377, Percent_Identity=35.5437665782493, Blast_Score=220, Evalue=1e-58, Organism=Escherichia coli, GI2367285, Length=364, Percent_Identity=27.4725274725275, Blast_Score=141, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000653 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]
EC number: NA
Molecular weight: Translated: 42204; Mature: 42204
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVPLSRPDITQKEIDAVVEVLRSDILSIGPKIEEFERKIADYVGKKYAIAVNSGTSALH CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHH LIVRALGIKDGDEVITTPFTFIASVNCFLFERAKPVFVDIDPDTLNMDINKIEEKITEKT HHHHHHCCCCCCCEEECHHHHHHHHHHHEEECCCCEEEECCCCCCCCCHHHHHHHHHHHH KAILTVDVFGQPMDMEKVNEIAKKYGLKVIEDSCEALGSEYKGIKAGTLCDAGAFAFYPN HEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECC KQITTAEGGVIVTDDEEIAQLCRSMRSQGRPITGLWLEHERLGFNYRLSELHAALGIVQL CEEEECCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHH ERIEEIIKRRLEIAEKYNERLKDVKGVKIPYIAPEVNKMSWFVYVIRVDENIDRDKVMQY HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEEEEEEEECCCCCHHHHHHH LIDNGIGCRPYFTPVHLQSYIKELTGHKEGDFPITEKVARSTIALPFFNKITDEQIDYVV HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH DKLKEAIKIYSR HHHHHHHHHHCC >Mature Secondary Structure MKVPLSRPDITQKEIDAVVEVLRSDILSIGPKIEEFERKIADYVGKKYAIAVNSGTSALH CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHH LIVRALGIKDGDEVITTPFTFIASVNCFLFERAKPVFVDIDPDTLNMDINKIEEKITEKT HHHHHHCCCCCCCEEECHHHHHHHHHHHEEECCCCEEEECCCCCCCCCHHHHHHHHHHHH KAILTVDVFGQPMDMEKVNEIAKKYGLKVIEDSCEALGSEYKGIKAGTLCDAGAFAFYPN HEEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECC KQITTAEGGVIVTDDEEIAQLCRSMRSQGRPITGLWLEHERLGFNYRLSELHAALGIVQL CEEEECCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHH ERIEEIIKRRLEIAEKYNERLKDVKGVKIPYIAPEVNKMSWFVYVIRVDENIDRDKVMQY HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEEEEEEEECCCCCHHHHHHH LIDNGIGCRPYFTPVHLQSYIKELTGHKEGDFPITEKVARSTIALPFFNKITDEQIDYVV HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH DKLKEAIKIYSR HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]