| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
Click here to switch to the map view.
The map label for this gene is 20807068
Identifier: 20807068
GI number: 20807068
Start: 573256
End: 574692
Strand: Direct
Name: 20807068
Synonym: TTE0571
Alternate gene names: NA
Gene position: 573256-574692 (Clockwise)
Preceding gene: 20807067
Following gene: 20807069
Centisome position: 21.32
GC content: 34.59
Gene sequence:
>1437_bases ATGATAGTAATACAGGCTAAACTTATTTTTCTAAATCAAGAAGACAAACAAATAGTATTAGACTTAATGAGAAGATGGTC ATCCTGCATGAGATTTGCATACAAAAGGCTTCTAGAAGGTTATGATAGAAAAACATTAAAAAGAGACCTTCAGGGGATGT TTGACTTAAACTCAAGATATGTAGATGATGCAATAATGAAAGCAAGAAGCACACTAGAATCTGCTAGACAATTAGACAAT AATCCAAAGAAAGTCATTTTTGGAGGAAGAGACTTGTTTGGAAAACTTCAAAAGCGACATATAAATGGGAAAGAATACCA AAAGCTAAAAACAAAGTGGCAAGAAAGAAGAAAAGGAAATCTCTATTCAAGAGGGGATAAAAGCAAAAAAGGAAATCTCA ACACAAGAATAGAAGTAAAAGAAAATGGTACTTTCTTAAGGATAAATGTAGGGGAAAGAAAATATGTATATGCCAGAATA GAAGCAGGCTACAAAAAGAATAAGAGAAGAGAAGAGCTCCTTCAGGAAATCGCCGAATCAAACATACCCTACTCTGTAGA ATTAAAACTCAAAAATGGCAATATATACGCCTATTTTGCTATTGAAGAAGAATATCCAGAAATAAAAATCACAAAAGAAA AAGGAGTCATAGGAATAGATATAAATGCATATCCAGAAAACATATCATGGACAGAAGTAGATGAAAAAGGGAATCTAATA AGTTATGGCAGTATACCAATGCCAGAGCTTGCAAGTGGCAGTAAAGACAAAAGAGAATACTTCAGATGGCAATATGCTCA TGAGATAGTAAAAATAGCAAAAGAGAAAGGAAAAGCAATAGTAATTGAAAAATTGGACATAAAAGAAAAAGGCAAAAGAG GAGACTTTTCAGGGAGAAAATCAAGGAGAATAAGACATAGCTTTAGCTATAAATCACTTCTTTCAAAAATAAAAACACTA GCAAAAAGAGAAGGGATAGAAGTAATAGAAGTCAATCCTTCTTACACCTCAATAATAGGGATGTTAAAATATGCACCGCA GTATATGATAACAAAAGATATAGCAGCAGCCTATGTAATAGCAAGAAGAGGATTAGGACTGCAAGAAAAGATACCAGATA ATTATATGAAGTTTCTCAACGCATTGACTGTAGAAGAATTAGAAGAATTAAAAGAGTACGTAAAGAAAACAGTCAGAAAC AAGCATTTAAGAGAGAAACATATAAAGGAGATAAAGAAAGCAATAAAATTTTTGCAAAGCCTTGAGAGTAAGCCAGGAAG GGTGCTAGAACCTCTGGATGGAACAAGTTTTAGTGCCTATGATTTCTGGCGAGTTCTCAAGGTAGCGGTGGTGACTCCAC TCTCTCCTGAGAAGGTGCCAAGAGACTTCTCTGCCCTGAAGGAACTATTAATTCAGGGCAAGTGGGGAGACCCGTAA
Upstream 100 bases:
>100_bases AAAGAAAACGAAGAAGATATAAATAAAGAGCTAGCAGAGGACTTAATAGCAATAGTAACATCTTTTGTAGCAAGAATTTA CGGACAAAGGAGCAAAAAGC
Downstream 100 bases:
>100_bases GGACGCGAGTTCCTGCTTCTTGGGGCAGGGGCTATGGCTTTCCCAAATACCGCCTGCTGGGGATGGGGAAAGTCTGAAGG GCGGACTACAAATACCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase N-Terminal Domain Protein; ISChy7 Transposase; ISChy5 Transposase; Transposase OrfB Family; Transposase InteRNAl Deletion; Transposon Transposase
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MIVIQAKLIFLNQEDKQIVLDLMRRWSSCMRFAYKRLLEGYDRKTLKRDLQGMFDLNSRYVDDAIMKARSTLESARQLDN NPKKVIFGGRDLFGKLQKRHINGKEYQKLKTKWQERRKGNLYSRGDKSKKGNLNTRIEVKENGTFLRINVGERKYVYARI EAGYKKNKRREELLQEIAESNIPYSVELKLKNGNIYAYFAIEEEYPEIKITKEKGVIGIDINAYPENISWTEVDEKGNLI SYGSIPMPELASGSKDKREYFRWQYAHEIVKIAKEKGKAIVIEKLDIKEKGKRGDFSGRKSRRIRHSFSYKSLLSKIKTL AKREGIEVIEVNPSYTSIIGMLKYAPQYMITKDIAAAYVIARRGLGLQEKIPDNYMKFLNALTVEELEELKEYVKKTVRN KHLREKHIKEIKKAIKFLQSLESKPGRVLEPLDGTSFSAYDFWRVLKVAVVTPLSPEKVPRDFSALKELLIQGKWGDP
Sequences:
>Translated_478_residues MIVIQAKLIFLNQEDKQIVLDLMRRWSSCMRFAYKRLLEGYDRKTLKRDLQGMFDLNSRYVDDAIMKARSTLESARQLDN NPKKVIFGGRDLFGKLQKRHINGKEYQKLKTKWQERRKGNLYSRGDKSKKGNLNTRIEVKENGTFLRINVGERKYVYARI EAGYKKNKRREELLQEIAESNIPYSVELKLKNGNIYAYFAIEEEYPEIKITKEKGVIGIDINAYPENISWTEVDEKGNLI SYGSIPMPELASGSKDKREYFRWQYAHEIVKIAKEKGKAIVIEKLDIKEKGKRGDFSGRKSRRIRHSFSYKSLLSKIKTL AKREGIEVIEVNPSYTSIIGMLKYAPQYMITKDIAAAYVIARRGLGLQEKIPDNYMKFLNALTVEELEELKEYVKKTVRN KHLREKHIKEIKKAIKFLQSLESKPGRVLEPLDGTSFSAYDFWRVLKVAVVTPLSPEKVPRDFSALKELLIQGKWGDP >Mature_478_residues MIVIQAKLIFLNQEDKQIVLDLMRRWSSCMRFAYKRLLEGYDRKTLKRDLQGMFDLNSRYVDDAIMKARSTLESARQLDN NPKKVIFGGRDLFGKLQKRHINGKEYQKLKTKWQERRKGNLYSRGDKSKKGNLNTRIEVKENGTFLRINVGERKYVYARI EAGYKKNKRREELLQEIAESNIPYSVELKLKNGNIYAYFAIEEEYPEIKITKEKGVIGIDINAYPENISWTEVDEKGNLI SYGSIPMPELASGSKDKREYFRWQYAHEIVKIAKEKGKAIVIEKLDIKEKGKRGDFSGRKSRRIRHSFSYKSLLSKIKTL AKREGIEVIEVNPSYTSIIGMLKYAPQYMITKDIAAAYVIARRGLGLQEKIPDNYMKFLNALTVEELEELKEYVKKTVRN KHLREKHIKEIKKAIKFLQSLESKPGRVLEPLDGTSFSAYDFWRVLKVAVVTPLSPEKVPRDFSALKELLIQGKWGDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55669; Mature: 55669
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVIQAKLIFLNQEDKQIVLDLMRRWSSCMRFAYKRLLEGYDRKTLKRDLQGMFDLNSRY CEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH VDDAIMKARSTLESARQLDNNPKKVIFGGRDLFGKLQKRHINGKEYQKLKTKWQERRKGN HHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC LYSRGDKSKKGNLNTRIEVKENGTFLRINVGERKYVYARIEAGYKKNKRREELLQEIAES CCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHC NIPYSVELKLKNGNIYAYFAIEEEYPEIKITKEKGVIGIDINAYPENISWTEVDEKGNLI CCCEEEEEEEECCCEEEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCEEECCCCCEE SYGSIPMPELASGSKDKREYFRWQYAHEIVKIAKEKGKAIVIEKLDIKEKGKRGDFSGRK EECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHCCCCCCCCCCH SRRIRHSFSYKSLLSKIKTLAKREGIEVIEVNPSYTSIIGMLKYAPQYMITKDIAAAYVI HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHH ARRGLGLQEKIPDNYMKFLNALTVEELEELKEYVKKTVRNKHLREKHIKEIKKAIKFLQS HHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LESKPGRVLEPLDGTSFSAYDFWRVLKVAVVTPLSPEKVPRDFSALKELLIQGKWGDP HCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIVIQAKLIFLNQEDKQIVLDLMRRWSSCMRFAYKRLLEGYDRKTLKRDLQGMFDLNSRY CEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH VDDAIMKARSTLESARQLDNNPKKVIFGGRDLFGKLQKRHINGKEYQKLKTKWQERRKGN HHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC LYSRGDKSKKGNLNTRIEVKENGTFLRINVGERKYVYARIEAGYKKNKRREELLQEIAES CCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHC NIPYSVELKLKNGNIYAYFAIEEEYPEIKITKEKGVIGIDINAYPENISWTEVDEKGNLI CCCEEEEEEEECCCEEEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCEEECCCCCEE SYGSIPMPELASGSKDKREYFRWQYAHEIVKIAKEKGKAIVIEKLDIKEKGKRGDFSGRK EECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHCCCCCCCCCCH SRRIRHSFSYKSLLSKIKTLAKREGIEVIEVNPSYTSIIGMLKYAPQYMITKDIAAAYVI HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHH ARRGLGLQEKIPDNYMKFLNALTVEELEELKEYVKKTVRNKHLREKHIKEIKKAIKFLQS HHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LESKPGRVLEPLDGTSFSAYDFWRVLKVAVVTPLSPEKVPRDFSALKELLIQGKWGDP HCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA