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The map label for this gene is yfmS [H]

Identifier: 20807059

GI number: 20807059

Start: 565302

End: 565640

Strand: Direct

Name: yfmS [H]

Synonym: TTE0558

Alternate gene names: 20807059

Gene position: 565302-565640 (Clockwise)

Preceding gene: 20807058

Following gene: 20807060

Centisome position: 21.02

GC content: 33.92

Gene sequence:

>339_bases
ATGACCCTTATTGAGGCGTTTAAAAAAATAGCACCATTTATTAATACAATGACCACAGAGGATTTAGGAATATCTATATG
TGATGTTAATGAATGCGTATTATATCTACCTGCTAGAACGATTAATCATAACATAAAAGTAGGCGATCCTTTGAAAGAAG
GAACAGCTATATATGAAGCGATAAAAACTGGAAAACGTGTTGTTAAAAGAGTAGGAAGTGAAGTGTATGGAGTTCCGTAT
ATTGCTATAGCGTTTCCGCTAATAGAGAATGGAGTAATAACAGGGGGAGTAAGTATATTTCAATCTACAGCAAAACAAGT
GGTAAAGGATTTACAATAG

Upstream 100 bases:

>100_bases
CCTCATTGTATTCGTAGGTTCCGGAGTAGGTTTCTCTATGGCTGCCTCAGCTTTTATATATTAACTGTGCTTATCTTGGT
GAATAATATGGGGTGATAAA

Downstream 100 bases:

>100_bases
TTGCAAATGAAATAAGAAAGTTATCTATGTCTACCAAAGACTCTGTAGAATCTATAAAGAATATACTTACAAAACTTAAA
GAAATAAGTTACACAATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MTLIEAFKKIAPFINTMTTEDLGISICDVNECVLYLPARTINHNIKVGDPLKEGTAIYEAIKTGKRVVKRVGSEVYGVPY
IAIAFPLIENGVITGGVSIFQSTAKQVVKDLQ

Sequences:

>Translated_112_residues
MTLIEAFKKIAPFINTMTTEDLGISICDVNECVLYLPARTINHNIKVGDPLKEGTAIYEAIKTGKRVVKRVGSEVYGVPY
IAIAFPLIENGVITGGVSIFQSTAKQVVKDLQ
>Mature_111_residues
TLIEAFKKIAPFINTMTTEDLGISICDVNECVLYLPARTINHNIKVGDPLKEGTAIYEAIKTGKRVVKRVGSEVYGVPYI
AIAFPLIENGVITGGVSIFQSTAKQVVKDLQ

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089 [H]

Pfam domain/function: PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 12198; Mature: 12067

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLIEAFKKIAPFINTMTTEDLGISICDVNECVLYLPARTINHNIKVGDPLKEGTAIYEA
CCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEECHHHCCCCCCCCCCHHHHHHHHHH
IKTGKRVVKRVGSEVYGVPYIAIAFPLIENGVITGGVSIFQSTAKQVVKDLQ
HHHHHHHHHHHCCHHCCCCHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLIEAFKKIAPFINTMTTEDLGISICDVNECVLYLPARTINHNIKVGDPLKEGTAIYEA
CHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEECHHHCCCCCCCCCCHHHHHHHHHH
IKTGKRVVKRVGSEVYGVPYIAIAFPLIENGVITGGVSIFQSTAKQVVKDLQ
HHHHHHHHHHHCCHHCCCCHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]