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The map label for this gene is FixA [H]

Identifier: 20807047

GI number: 20807047

Start: 552571

End: 553353

Strand: Direct

Name: FixA [H]

Synonym: TTE0546

Alternate gene names: 20807047

Gene position: 552571-553353 (Clockwise)

Preceding gene: 20807046

Following gene: 20807048

Centisome position: 20.55

GC content: 41.38

Gene sequence:

>783_bases
ATGAACATTATTGTTTGCATAAAGCAGGTGCCTGACACAAGTGAAGTGAAGATAGACCCTGTCACAAAGACTCTCATAAG
AGAAGGAGTGCCAAGTATAATAAATCCGGAGGATAAAAATGCTTTGGAAGAAGCTATAAGAATCAGAGAAAAGTATGGAG
GGAAGGTTACAGTCATCACTATGGGGCCACAACAGGCAGAAGAAGCTTTAAGAGAAGCCCTTGCGATGGGAGCCGATGAG
GCTTATCTCCTTTCTGATAAGGCATTTGCAGGTGCCGATACTTGTGCAACTGCCAAAACTTTGGCAACGATGATTAAAAA
ACTGGAGTATGATTTAGTATTTTGTGGAAGACAGGCTATAGATGGCGACACAGCTCAAGTGGGACCGCAGCTGGCTGAAC
AGCTTGGTATTCCTCAAGTGACATACGTTAAAGAGATAAAAGTTGAAGGGGATTCCCTTATTGTCAAAAGGACACTTGAA
GATGGCTACGAAGTGATAAAAGTTAAGATGCCTGTGCTTCTCACGGCAACTAAGGAACTTAACACTCCAAGATATCCTTC
AATAAAGGGAATATTTGAAGCCTATAGAGAAAAAGAAGTAAAAATTGTAACTGCTTCAGAATTGGGAATTGACCCTCAGG
AAGTGGGACTTAAGGGTTCGCCGACTAGAGTTATAGCCACTACAACCCCTGAGACAGAGAGAGCAGGAGAGATTTTTACA
GGCAATGTAAAAGAATGTGTACAAAACCTCGTTCAGAGATTAGTTGAAAAACATCTTATATGA

Upstream 100 bases:

>100_bases
ATGAGGGATGCAAAGATTACGGAAATATATGAAGGTACATCAGAAGTTCAGAAAATGGTCATTGCTTCAAATATTTTAAA
GATGTAAGGAGGGAACTATC

Downstream 100 bases:

>100_bases
AGGAGGCTGGAAAAATGAGCGAATATAAAGATATATGGGTGTTTGTTGAGCAAAGAGAACAGAAACTCATGAATGTTTCT
TTAGAGATATTGGGAGAGGC

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MNIIVCIKQVPDTSEVKIDPVTKTLIREGVPSIINPEDKNALEEAIRIREKYGGKVTVITMGPQQAEEALREALAMGADE
AYLLSDKAFAGADTCATAKTLATMIKKLEYDLVFCGRQAIDGDTAQVGPQLAEQLGIPQVTYVKEIKVEGDSLIVKRTLE
DGYEVIKVKMPVLLTATKELNTPRYPSIKGIFEAYREKEVKIVTASELGIDPQEVGLKGSPTRVIATTTPETERAGEIFT
GNVKECVQNLVQRLVEKHLI

Sequences:

>Translated_260_residues
MNIIVCIKQVPDTSEVKIDPVTKTLIREGVPSIINPEDKNALEEAIRIREKYGGKVTVITMGPQQAEEALREALAMGADE
AYLLSDKAFAGADTCATAKTLATMIKKLEYDLVFCGRQAIDGDTAQVGPQLAEQLGIPQVTYVKEIKVEGDSLIVKRTLE
DGYEVIKVKMPVLLTATKELNTPRYPSIKGIFEAYREKEVKIVTASELGIDPQEVGLKGSPTRVIATTTPETERAGEIFT
GNVKECVQNLVQRLVEKHLI
>Mature_260_residues
MNIIVCIKQVPDTSEVKIDPVTKTLIREGVPSIINPEDKNALEEAIRIREKYGGKVTVITMGPQQAEEALREALAMGADE
AYLLSDKAFAGADTCATAKTLATMIKKLEYDLVFCGRQAIDGDTAQVGPQLAEQLGIPQVTYVKEIKVEGDSLIVKRTLE
DGYEVIKVKMPVLLTATKELNTPRYPSIKGIFEAYREKEVKIVTASELGIDPQEVGLKGSPTRVIATTTPETERAGEIFT
GNVKECVQNLVQRLVEKHLI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=216, Percent_Identity=34.7222222222222, Blast_Score=124, Evalue=9e-29,
Organism=Homo sapiens, GI62420877, Length=202, Percent_Identity=35.1485148514851, Blast_Score=120, Evalue=1e-27,
Organism=Escherichia coli, GI2367123, Length=261, Percent_Identity=30.2681992337165, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI87081682, Length=217, Percent_Identity=30.8755760368664, Blast_Score=92, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI25141345, Length=267, Percent_Identity=33.7078651685393, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6321646, Length=261, Percent_Identity=31.8007662835249, Blast_Score=105, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24651147, Length=239, Percent_Identity=34.3096234309623, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24651145, Length=239, Percent_Identity=34.3096234309623, Blast_Score=112, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28499; Mature: 28499

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIVCIKQVPDTSEVKIDPVTKTLIREGVPSIINPEDKNALEEAIRIREKYGGKVTVIT
CCEEEEEECCCCCCCEEECHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEE
MGPQQAEEALREALAMGADEAYLLSDKAFAGADTCATAKTLATMIKKLEYDLVFCGRQAI
ECHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCHHC
DGDTAQVGPQLAEQLGIPQVTYVKEIKVEGDSLIVKRTLEDGYEVIKVKMPVLLTATKEL
CCCHHHCCHHHHHHHCCCCEEEEEEEEECCCEEEEEHHHHCCCEEEEEECCEEEEEHHHC
NTPRYPSIKGIFEAYREKEVKIVTASELGIDPQEVGLKGSPTRVIATTTPETERAGEIFT
CCCCCCCHHHHHHHHHCCCEEEEEHHHCCCCHHHCCCCCCCCEEEEECCCCCHHCCCEEE
GNVKECVQNLVQRLVEKHLI
CCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIIVCIKQVPDTSEVKIDPVTKTLIREGVPSIINPEDKNALEEAIRIREKYGGKVTVIT
CCEEEEEECCCCCCCEEECHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEE
MGPQQAEEALREALAMGADEAYLLSDKAFAGADTCATAKTLATMIKKLEYDLVFCGRQAI
ECHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCHHC
DGDTAQVGPQLAEQLGIPQVTYVKEIKVEGDSLIVKRTLEDGYEVIKVKMPVLLTATKEL
CCCHHHCCHHHHHHHCCCCEEEEEEEEECCCEEEEEHHHHCCCEEEEEECCEEEEEHHHC
NTPRYPSIKGIFEAYREKEVKIVTASELGIDPQEVGLKGSPTRVIATTTPETERAGEIFT
CCCCCCCHHHHHHHHHCCCEEEEEHHHCCCCHHHCCCCCCCCEEEEECCCCCHHCCCEEE
GNVKECVQNLVQRLVEKHLI
CCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA