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The map label for this gene is rex [H]

Identifier: 20807044

GI number: 20807044

Start: 549818

End: 550492

Strand: Direct

Name: rex [H]

Synonym: TTE0543

Alternate gene names: 20807044

Gene position: 549818-550492 (Clockwise)

Preceding gene: 20807043

Following gene: 20807045

Centisome position: 20.44

GC content: 37.04

Gene sequence:

>675_bases
GTGAGCAAAAAAACTATAGTATCTATGGCCGTTATAAGAAGGCTCCCAAGATATCACAGGTGCTTAGAGGAACTTTTAAA
AAATGATATAAAGAGGATTTCTTCAAAAGAGCTCAGCGAGAGAATGGGCGTTACTGCTTCTCAAATAAGGCAGGACCTCA
ATAATTTCGGAGGTTTTGGCCAGCAAGGATATGGCTATAATGTTGAGGAGCTTTACAATAATCTGACCAAAATTTTAGGC
CTTGACAAAACCTATAACACTATCATAATAGGCGCTGGCAATTTAGGACAAGCGATTGCCAATTATACTCGATTTGAGAA
GTCTGGATTCAATTTAAAAGGCATATTTGACATAAACCCAAGGCTGTTTGGATTGAAGATAAGAGATGTAGAGGTAATGG
ATGTAGAAAAAGTGGAAGAATTCATAGCTAACAACCACATAGATATAGCAATACTGTGTATTCCCAAAGACAATGCCCAG
TACACTGCTGACAGATTAGTAAAAGCTGGGATTAAGGCTATATGGAATTTTTCACCAATAGATTTAAAAGTGCCCGACGA
TGTAATTTTAGAGAATGTCCACTTGAGCGACAGTCTTTTTACCATATCTTACAGATTGAATGAAGAAGAGCTATTTAAAA
AGCTTAAAGGGGAAACAGTGAAAGTAGATGGATGA

Upstream 100 bases:

>100_bases
ATTTTAATAATTCCTCATATTCTACTATGTTTTTGTTTCATTGACAAGAAATTTACAATGTTGTATAATTTCAAATACAT
AGTAGAATGAGGTGAGGACA

Downstream 100 bases:

>100_bases
AATGTCCATCTACTTTTTATTTTGGCATGATTTTTGCATAAAATATTAAAAGCGAAAACTCAAAAGGAGGGTGACTTTGG
TGGAATATAAAAACATAGAA

Product: redox-sensing transcriptional repressor Rex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSKKTIVSMAVIRRLPRYHRCLEELLKNDIKRISSKELSERMGVTASQIRQDLNNFGGFGQQGYGYNVEELYNNLTKILG
LDKTYNTIIIGAGNLGQAIANYTRFEKSGFNLKGIFDINPRLFGLKIRDVEVMDVEKVEEFIANNHIDIAILCIPKDNAQ
YTADRLVKAGIKAIWNFSPIDLKVPDDVILENVHLSDSLFTISYRLNEEELFKKLKGETVKVDG

Sequences:

>Translated_224_residues
MSKKTIVSMAVIRRLPRYHRCLEELLKNDIKRISSKELSERMGVTASQIRQDLNNFGGFGQQGYGYNVEELYNNLTKILG
LDKTYNTIIIGAGNLGQAIANYTRFEKSGFNLKGIFDINPRLFGLKIRDVEVMDVEKVEEFIANNHIDIAILCIPKDNAQ
YTADRLVKAGIKAIWNFSPIDLKVPDDVILENVHLSDSLFTISYRLNEEELFKKLKGETVKVDG
>Mature_223_residues
SKKTIVSMAVIRRLPRYHRCLEELLKNDIKRISSKELSERMGVTASQIRQDLNNFGGFGQQGYGYNVEELYNNLTKILGL
DKTYNTIIIGAGNLGQAIANYTRFEKSGFNLKGIFDINPRLFGLKIRDVEVMDVEKVEEFIANNHIDIAILCIPKDNAQY
TADRLVKAGIKAIWNFSPIDLKVPDDVILENVHLSDSLFTISYRLNEEELFKKLKGETVKVDG

Specific function: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state [H]

COG id: COG2344

COG function: function code R; AT-rich DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory rex family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR009718
- InterPro:   IPR022876
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02629 CoA_binding; PF06971 Put_DNA-bind_N [H]

EC number: NA

Molecular weight: Translated: 25461; Mature: 25330

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKTIVSMAVIRRLPRYHRCLEELLKNDIKRISSKELSERMGVTASQIRQDLNNFGGFG
CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
QQGYGYNVEELYNNLTKILGLDKTYNTIIIGAGNLGQAIANYTRFEKSGFNLKGIFDINP
CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCC
RLFGLKIRDVEVMDVEKVEEFIANNHIDIAILCIPKDNAQYTADRLVKAGIKAIWNFSPI
EEEEEEECCEEEHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCC
DLKVPDDVILENVHLSDSLFTISYRLNEEELFKKLKGETVKVDG
EEECCHHHHHCCEECCCCEEEEEEECCHHHHHHHHCCCEEEECC
>Mature Secondary Structure 
SKKTIVSMAVIRRLPRYHRCLEELLKNDIKRISSKELSERMGVTASQIRQDLNNFGGFG
CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
QQGYGYNVEELYNNLTKILGLDKTYNTIIIGAGNLGQAIANYTRFEKSGFNLKGIFDINP
CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCC
RLFGLKIRDVEVMDVEKVEEFIANNHIDIAILCIPKDNAQYTADRLVKAGIKAIWNFSPI
EEEEEEECCEEEHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCC
DLKVPDDVILENVHLSDSLFTISYRLNEEELFKKLKGETVKVDG
EEECCHHHHHCCEECCCCEEEEEEECCHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA