| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is ArtM [H]
Identifier: 20807014
GI number: 20807014
Start: 520646
End: 521308
Strand: Direct
Name: ArtM [H]
Synonym: TTE0513
Alternate gene names: 20807014
Gene position: 520646-521308 (Clockwise)
Preceding gene: 20807013
Following gene: 20807015
Centisome position: 19.36
GC content: 40.72
Gene sequence:
>663_bases ATGACAGTAGACTTTTTGAGCATGGTAAAATACACGCCACTTTTTATAAGCGGACTTATAATGACCCTTAAACTGACTTT CCTTGCAGTGACAATTGGAGTTCTGATGGGGCTTTTTATAGCTCTGATGAAGATGTCCTCAATAAAACCTATAAAGCTTG TCGCTTCAAGCTATATAGAAGTGATAAGGGGAACTCCTCTTTTAGTGCAATTACTTCTCATATACAATGGACTTATGCAG TTTGGCATGAACATTCCTGCTTTTACAGCAGGAGTTTCAGCACTGGCAATAAACAGTTCCGCATATGTGGCAGAAATTAT AAGGGCAGGGATACAGGCTGTTGACCCGGGGCAAAATGAAGCAGCCCGTTCTCTTGGGATGACTCATGCAATGGCCATGA GGTATGTCATAATACCCCAGGCCATAAAAAATATCCTTCCGGCTTTGGGAAATGAATTTATTGTGATGCTCAAAGAATCG GCTATAGTTTCAGTGATAGGCTTTGCAGACCTTACGCGTCAGGCAGACATCATACAGAGTGTGACTTACAGGTATTTTGA GCCTTATATAATAATCGCTGCCATATACTTTGTAATGACTTTGACTTTTTCAAAACTTCTTTCTCTCTTCGAAAGGAGGT TGAGGGCAGGTGATATTCGTTAA
Upstream 100 bases:
>100_bases AGTGGAGAGTACGACAAACTTGTAGATAAGTGGTTTAAGCAGTAGTTTAAAGTGGAGAGTTTTTCTCCACTAAAATTTTG TGAAGGAGAGAAGGTAGGCT
Downstream 100 bases:
>100_bases TGATGTGTACAAAAACTTTGGCAGTTTAGAAGTCCTAAAAGGCGTTACATTAAAAGTCAACAAAGGTGAAGTTGTAGTCA TAATAGGTCCCAGCGGTTCC
Product: ABC-type amino acid transport system, permease component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTVDFLSMVKYTPLFISGLIMTLKLTFLAVTIGVLMGLFIALMKMSSIKPIKLVASSYIEVIRGTPLLVQLLLIYNGLMQ FGMNIPAFTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKES AIVSVIGFADLTRQADIIQSVTYRYFEPYIIIAAIYFVMTLTFSKLLSLFERRLRAGDIR
Sequences:
>Translated_220_residues MTVDFLSMVKYTPLFISGLIMTLKLTFLAVTIGVLMGLFIALMKMSSIKPIKLVASSYIEVIRGTPLLVQLLLIYNGLMQ FGMNIPAFTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKES AIVSVIGFADLTRQADIIQSVTYRYFEPYIIIAAIYFVMTLTFSKLLSLFERRLRAGDIR >Mature_219_residues TVDFLSMVKYTPLFISGLIMTLKLTFLAVTIGVLMGLFIALMKMSSIKPIKLVASSYIEVIRGTPLLVQLLLIYNGLMQF GMNIPAFTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESA IVSVIGFADLTRQADIIQSVTYRYFEPYIIIAAIYFVMTLTFSKLLSLFERRLRAGDIR
Specific function: Part of a binding-protein-dependent transport system for arginine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788226, Length=202, Percent_Identity=40.0990099009901, Blast_Score=158, Evalue=2e-40, Organism=Escherichia coli, GI1787030, Length=217, Percent_Identity=37.7880184331797, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1786873, Length=218, Percent_Identity=35.7798165137615, Blast_Score=137, Evalue=7e-34, Organism=Escherichia coli, GI1787087, Length=237, Percent_Identity=29.535864978903, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1788645, Length=211, Percent_Identity=34.1232227488152, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1788646, Length=221, Percent_Identity=31.2217194570136, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI48994930, Length=163, Percent_Identity=37.4233128834356, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI87082239, Length=207, Percent_Identity=29.951690821256, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1786874, Length=218, Percent_Identity=28.8990825688073, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1787086, Length=225, Percent_Identity=26.2222222222222, Blast_Score=76, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24227; Mature: 24095
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVDFLSMVKYTPLFISGLIMTLKLTFLAVTIGVLMGLFIALMKMSSIKPIKLVASSYIE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VIRGTPLLVQLLLIYNGLMQFGMNIPAFTAGVSALAINSSAYVAEIIRAGIQAVDPGQNE HHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH AARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIGFADLTRQADIIQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHH VTYRYFEPYIIIAAIYFVMTLTFSKLLSLFERRLRAGDIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TVDFLSMVKYTPLFISGLIMTLKLTFLAVTIGVLMGLFIALMKMSSIKPIKLVASSYIE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VIRGTPLLVQLLLIYNGLMQFGMNIPAFTAGVSALAINSSAYVAEIIRAGIQAVDPGQNE HHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH AARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIGFADLTRQADIIQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHH VTYRYFEPYIIIAAIYFVMTLTFSKLLSLFERRLRAGDIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]