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The map label for this gene is DedA [H]

Identifier: 20806797

GI number: 20806797

Start: 289516

End: 290136

Strand: Direct

Name: DedA [H]

Synonym: TTE0276

Alternate gene names: 20806797

Gene position: 289516-290136 (Clockwise)

Preceding gene: 20806796

Following gene: 20806798

Centisome position: 10.76

GC content: 39.77

Gene sequence:

>621_bases
ATGGAAAGCCAATCTTTTTTATATAACGCTGTAGTAAACTACGGCTACATAGCCCTTTTTCTTGTGCTTGCTTATGAGGG
GACTGGACTTCCTGGTCCTGTGGAGATTTTATTTTTTGCAGCAGCATACCTTGCGGTAAAGGGAGAGATGAATTTAGTTG
CTATAGTGCTTGTAGCAGCTTTAGGCAATGTCACTGGAAATGTGATAGCCTATTTAGTGGGATATTACAAGGGAAGGCCA
GTTGTAGAAAAATACGGCAAGTATTTGAAAATAACTGTGAAAGACTTAGAGGCTATGGATAAATGGTTTGCGAAGTACGG
CGGTTTTACTGTTCTTCTTGGAAGGCTGGTGGGACTGCCGCGCACTCCTGCTATTTGGGCGTCTGGGATTACCAGAATGA
ATTTTACCGTTTATGTGATTTTTTCTGCAATTGCTGATTTGATATGGTCTTCCTTTTGGACTTTAATATCTTATCTGGCA
GCAAAGCAGCTTATAAAAGTGGACTTTTTGACCAAGAGTCAGCCCCTTTGGGTATATTTTGTATCTACCATAGGGTTTAT
AATATTTTTATATGTAGTTTGGAGGGTAGTGCTTTGGATGAAAGAAAGATATCTCACATGA

Upstream 100 bases:

>100_bases
GAAATAAAAACTTTGTCAACAAACTGGGCAGGGCTAAATTGCCCTGTTTTAATTTTTTATGATATAATAAAACTTGAAAA
ATATAACGGATGGTGAAGCC

Downstream 100 bases:

>100_bases
CAGTTGAGAGGATTACAAATATTTCTGGATTATTGGAAATAGAGGATATTTGGCATGAATTAGAAGAAGAGGGAAAAGTG
TATCCTTTTAATACGTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MESQSFLYNAVVNYGYIALFLVLAYEGTGLPGPVEILFFAAAYLAVKGEMNLVAIVLVAALGNVTGNVIAYLVGYYKGRP
VVEKYGKYLKITVKDLEAMDKWFAKYGGFTVLLGRLVGLPRTPAIWASGITRMNFTVYVIFSAIADLIWSSFWTLISYLA
AKQLIKVDFLTKSQPLWVYFVSTIGFIIFLYVVWRVVLWMKERYLT

Sequences:

>Translated_206_residues
MESQSFLYNAVVNYGYIALFLVLAYEGTGLPGPVEILFFAAAYLAVKGEMNLVAIVLVAALGNVTGNVIAYLVGYYKGRP
VVEKYGKYLKITVKDLEAMDKWFAKYGGFTVLLGRLVGLPRTPAIWASGITRMNFTVYVIFSAIADLIWSSFWTLISYLA
AKQLIKVDFLTKSQPLWVYFVSTIGFIIFLYVVWRVVLWMKERYLT
>Mature_206_residues
MESQSFLYNAVVNYGYIALFLVLAYEGTGLPGPVEILFFAAAYLAVKGEMNLVAIVLVAALGNVTGNVIAYLVGYYKGRP
VVEKYGKYLKITVKDLEAMDKWFAKYGGFTVLLGRLVGLPRTPAIWASGITRMNFTVYVIFSAIADLIWSSFWTLISYLA
AKQLIKVDFLTKSQPLWVYFVSTIGFIIFLYVVWRVVLWMKERYLT

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23270; Mature: 23270

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESQSFLYNAVVNYGYIALFLVLAYEGTGLPGPVEILFFAAAYLAVKGEMNLVAIVLVAA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LGNVTGNVIAYLVGYYKGRPVVEKYGKYLKITVKDLEAMDKWFAKYGGFTVLLGRLVGLP
HHCCHHHHHHHHHHHHCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
RTPAIWASGITRMNFTVYVIFSAIADLIWSSFWTLISYLAAKQLIKVDFLTKSQPLWVYF
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VSTIGFIIFLYVVWRVVLWMKERYLT
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MESQSFLYNAVVNYGYIALFLVLAYEGTGLPGPVEILFFAAAYLAVKGEMNLVAIVLVAA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LGNVTGNVIAYLVGYYKGRPVVEKYGKYLKITVKDLEAMDKWFAKYGGFTVLLGRLVGLP
HHCCHHHHHHHHHHHHCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
RTPAIWASGITRMNFTVYVIFSAIADLIWSSFWTLISYLAAKQLIKVDFLTKSQPLWVYF
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VSTIGFIIFLYVVWRVVLWMKERYLT
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]