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The map label for this gene is RfaG2 [C]

Identifier: 20806796

GI number: 20806796

Start: 287957

End: 289171

Strand: Direct

Name: RfaG2 [C]

Synonym: TTE0275

Alternate gene names: 20806796

Gene position: 287957-289171 (Clockwise)

Preceding gene: 20806795

Following gene: 20806797

Centisome position: 10.71

GC content: 40.25

Gene sequence:

>1215_bases
TTGAAGAGCTCAAAAAACCGCAGGAAATGGGGGTTAGCTATGGATAATTTAAAAGTCACGGTGTTTACCAATGAATACCC
TCCTAATATTTATGGAGGAGCAGGTGTTCATGTAGACTACCTGACCAGAGAGTTGTCCAAGTTAATGAAAGTAGATGTGA
GGTGTTTTGGGGACCAGAAATTTTTTTCGGAGAATTTGACTGTAAAGGGATATAAAGAGTGGGAGGAGTTAAAAGAAGGG
TTAGATCCTAGGTATCAAAAAGTTTTAGGTCCTTTTTCAATAGATTTGGCGATGGTGAAGGACCCTGTTGATTCCGATGT
CCTTCATTGCCACACCTGGTACACCTTCATGGCAGGCTTTTTAGCTAAAAAGCTTTATGATAAGCCTTTAGTTGTGACAA
TTCACAGCCTTGAGCCCTTAAGGCCGTGGAAAGAAGAACAGTTGGGGAATGGGTATAAATTGAGTTCCTGGATGGAAAAA
ACAGGAATTAAAGCTGCTGACAGGATTATAGCCGTCTCCCAAGGCTCAAAAGAGGACATATTGAAATATTACGACGTTCC
TGAAGAAAAGATAGAGGTCATATACAATGGGATAGATTTAAAGGAGTACAAAAAGATAGATAGAAATGTTGCTAGAAAAA
AGTACGGAATTGAAGGAAGGTACATTCTCTTTGTAGGGAGAATATCTAGGCAGAAAGGGATTACTCACTTGATAGATGCA
GTGAAATATTTGCCTAAGGATGTAAAAGTGGTGCTGTGCGCCAGCTCTCCAGACACGCCAGAGGTGTTGGAAGAGGTAGA
GCAAAAGGTGAAGTTGCACGACAATATAATTTGGATAAACAAAATGGTGGAAAAAGAAGATATCGTAGAGCTTTATAGCA
ATGCAGAAGTGTTTGTGTGCCCTTCTATTTATGAGCCCTTTGGCATAATAAATTTGGAAGCGATGGCTTGTGAGACTCCC
GTTGTGGCAAGCGCTACAGGTGGGATTAAAGAAGTTGTGGTGCATGAGGAGACAGGCTTTTTGGTAGAGCCGGGAAACTC
TGAAGAGCTTGCGAAATATATAAATATTCTCCTGGAGAATAGAGAGTTGGCAAAGAAATTTGGGATAAATGGAAGGAAAA
GAGTTGAGGAGATGTTCAGCTGGGGAAGTATTGCTAAAAAGACCTATGAAATGTATAGGAAGGTTGTACAAGAGTATAAA
AAAGCGAAAAAGTAA

Upstream 100 bases:

>100_bases
GCTCTTTTTAAACTAGATAAGGCACTTTTTGAAGGTATTTACGAGGTAAACAACAGGCCTACTTGGTTTAAGATACCTTT
AAAGGGTATTTTAGAATGCA

Downstream 100 bases:

>100_bases
AGCAGGGCTAAATTGCACTGTTTATAATGTTAAAAAGTAGAGAAGTGGCATTTTGTGTGTAGATGCGACTTGTTACAAAG
CGGTAACAAAACTTGGCGAG

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKSSKNRRKWGLAMDNLKVTVFTNEYPPNIYGGAGVHVDYLTRELSKLMKVDVRCFGDQKFFSENLTVKGYKEWEELKEG
LDPRYQKVLGPFSIDLAMVKDPVDSDVLHCHTWYTFMAGFLAKKLYDKPLVVTIHSLEPLRPWKEEQLGNGYKLSSWMEK
TGIKAADRIIAVSQGSKEDILKYYDVPEEKIEVIYNGIDLKEYKKIDRNVARKKYGIEGRYILFVGRISRQKGITHLIDA
VKYLPKDVKVVLCASSPDTPEVLEEVEQKVKLHDNIIWINKMVEKEDIVELYSNAEVFVCPSIYEPFGIINLEAMACETP
VVASATGGIKEVVVHEETGFLVEPGNSEELAKYINILLENRELAKKFGINGRKRVEEMFSWGSIAKKTYEMYRKVVQEYK
KAKK

Sequences:

>Translated_404_residues
MKSSKNRRKWGLAMDNLKVTVFTNEYPPNIYGGAGVHVDYLTRELSKLMKVDVRCFGDQKFFSENLTVKGYKEWEELKEG
LDPRYQKVLGPFSIDLAMVKDPVDSDVLHCHTWYTFMAGFLAKKLYDKPLVVTIHSLEPLRPWKEEQLGNGYKLSSWMEK
TGIKAADRIIAVSQGSKEDILKYYDVPEEKIEVIYNGIDLKEYKKIDRNVARKKYGIEGRYILFVGRISRQKGITHLIDA
VKYLPKDVKVVLCASSPDTPEVLEEVEQKVKLHDNIIWINKMVEKEDIVELYSNAEVFVCPSIYEPFGIINLEAMACETP
VVASATGGIKEVVVHEETGFLVEPGNSEELAKYINILLENRELAKKFGINGRKRVEEMFSWGSIAKKTYEMYRKVVQEYK
KAKK
>Mature_404_residues
MKSSKNRRKWGLAMDNLKVTVFTNEYPPNIYGGAGVHVDYLTRELSKLMKVDVRCFGDQKFFSENLTVKGYKEWEELKEG
LDPRYQKVLGPFSIDLAMVKDPVDSDVLHCHTWYTFMAGFLAKKLYDKPLVVTIHSLEPLRPWKEEQLGNGYKLSSWMEK
TGIKAADRIIAVSQGSKEDILKYYDVPEEKIEVIYNGIDLKEYKKIDRNVARKKYGIEGRYILFVGRISRQKGITHLIDA
VKYLPKDVKVVLCASSPDTPEVLEEVEQKVKLHDNIIWINKMVEKEDIVELYSNAEVFVCPSIYEPFGIINLEAMACETP
VVASATGGIKEVVVHEETGFLVEPGNSEELAKYINILLENRELAKKFGINGRKRVEEMFSWGSIAKKTYEMYRKVVQEYK
KAKK

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI14861836, Length=261, Percent_Identity=26.4367816091954, Blast_Score=73, Evalue=4e-13,
Organism=Escherichia coli, GI1790061, Length=203, Percent_Identity=26.1083743842365, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17532709, Length=239, Percent_Identity=25.5230125523013, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI32564184, Length=301, Percent_Identity=23.9202657807309, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI9755344, Length=251, Percent_Identity=24.7011952191235, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21357469, Length=292, Percent_Identity=22.6027397260274, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 46447; Mature: 46447

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSKNRRKWGLAMDNLKVTVFTNEYPPNIYGGAGVHVDYLTRELSKLMKVDVRCFGDQK
CCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCHH
FFSENLTVKGYKEWEELKEGLDPRYQKVLGPFSIDLAMVKDPVDSDVLHCHTWYTFMAGF
HHHCCCCCCCHHHHHHHHHCCCHHHHHHHCCCEEEHEEECCCCCCCCEEHHHHHHHHHHH
LAKKLYDKPLVVTIHSLEPLRPWKEEQLGNGYKLSSWMEKTGIKAADRIIAVSQGSKEDI
HHHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHCCHHHHHEEEECCCCHHHH
LKYYDVPEEKIEVIYNGIDLKEYKKIDRNVARKKYGIEGRYILFVGRISRQKGITHLIDA
HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCHHHHHHH
VKYLPKDVKVVLCASSPDTPEVLEEVEQKVKLHDNIIWINKMVEKEDIVELYSNAEVFVC
HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCEEEC
PSIYEPFGIINLEAMACETPVVASATGGIKEVVVHEETGFLVEPGNSEELAKYINILLEN
CCCCCCCCEEEEEHHHCCCCCEECCCCCCEEEEEEECCCCEECCCCHHHHHHHHHHHHCC
RELAKKFGINGRKRVEEMFSWGSIAKKTYEMYRKVVQEYKKAKK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSSKNRRKWGLAMDNLKVTVFTNEYPPNIYGGAGVHVDYLTRELSKLMKVDVRCFGDQK
CCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCHH
FFSENLTVKGYKEWEELKEGLDPRYQKVLGPFSIDLAMVKDPVDSDVLHCHTWYTFMAGF
HHHCCCCCCCHHHHHHHHHCCCHHHHHHHCCCEEEHEEECCCCCCCCEEHHHHHHHHHHH
LAKKLYDKPLVVTIHSLEPLRPWKEEQLGNGYKLSSWMEKTGIKAADRIIAVSQGSKEDI
HHHHHCCCCEEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHCCHHHHHEEEECCCCHHHH
LKYYDVPEEKIEVIYNGIDLKEYKKIDRNVARKKYGIEGRYILFVGRISRQKGITHLIDA
HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHCCHHHHHHH
VKYLPKDVKVVLCASSPDTPEVLEEVEQKVKLHDNIIWINKMVEKEDIVELYSNAEVFVC
HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCEEEC
PSIYEPFGIINLEAMACETPVVASATGGIKEVVVHEETGFLVEPGNSEELAKYINILLEN
CCCCCCCCEEEEEHHHCCCCCEECCCCCCEEEEEEECCCCEECCCCHHHHHHHHHHHHCC
RELAKKFGINGRKRVEEMFSWGSIAKKTYEMYRKVVQEYKKAKK
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]