| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is Ald [H]
Identifier: 20806687
GI number: 20806687
Start: 157822
End: 158946
Strand: Direct
Name: Ald [H]
Synonym: TTE0161
Alternate gene names: 20806687
Gene position: 157822-158946 (Clockwise)
Preceding gene: 20806686
Following gene: 20806688
Centisome position: 5.87
GC content: 44.0
Gene sequence:
>1125_bases ATGAGAATTGGTGTTCCCAAAGAAATAAAAACTGCAGAGTCCCGTGTAGCCATAACGCCTGCAGGAGTAGAGGCTTTTGT CAAGAATGGACATGAAGTGTACATTGAAAAGGACGCAGGATTAGGTAGCGGTATCACAAATGAGGAATATGAAAAGGCAG GGGCAAAAATACTTCCAACTGCCAAAGAAGTGTACGACATAGCTGACATGATAATGAAGGTAAAAGAGCCACAGCCAAGC GAATACGACTACTTAAAAGAGGGACAAGTTTTATTTACTTATCTACATTTAGCACCCGATAAACAGCAGACAGAAGCTTT ATTAAGACAGAAAGTAGTAGGAATCGCCTATGAGACGGTACAGCTTGACAACGGTTCTTTGCCTTTGTTAACACCCATGA GCGAAGTTGCTGGTAGAATGGCTGTCACCATAGGAGCTTACCTTTTGACTAGCATAAATCAAGGCAGAGGTATTGTGATG GGCGGGGTTCCTGGAGTAGAGCCAGCAGAAGTAGTCATAATAGGCGGCGGAACAGTGGGCACCAATGCGGCAAAGGTAGC AGTTGGCATGGGAGCAAGAGTTACTATACTGGATGTAAATCCTGCAAGGCTTGCCTACCTTGACGACATATTTGGAGGAA GAGTGACAACTCTAATGTCAAATAGCTTTAATATTGCAGAAAGCGTAAAGAAGGCAGACTTATTGATAGGTGCTGTTCTT ATACCAGGGGCTCGAGCGCCTAAGCTTGTAACTGAAGAAATGGTCAAGACAATGAAGAAGGGCGCTGTAATTGTGGATGT AGCAATAGACCAGGGTGGATGCGTAGAAACATGTGACAGAACTACTTCCCACACAGATCCATATTTCATCAAGCACGGAG TTGTTCACTACTCAGTTCCTAATATACCAGGAGCTGTACCAAGGACTTCAACCTTTGCTCTCACGAATGTCACACTTCCT TACGCATTAGAAATTGCTAACAAGGGCTACAAGAGGGCGTTGCTTGAAAATAGAGCACTTCTAAAAGGGCTCAATGTCTA CAAAGGCATGGTGACATACAAACCTGTGGCAGAAGCGCAAGGATTAGAGTATGTGGATCCCGTTGAAGCTTTGAATAAAG CGTAA
Upstream 100 bases:
>100_bases TTTACTATTTCTATTTTTTGTAGAAGGATTTTTGGCAGCATGTGTAGAATTTATATACTGAAAAGCTTTTGATAAAAAAT TGATAAAGGGGAGAGTATTT
Downstream 100 bases:
>100_bases ATGTCTGACCTCCCACAATAAATGTGGGAGGTTTATTTAGTCTGTTGACAGAGTTTAAAAAGTGGCATTTTGTGTGTAAA TGCGACTTGTTGTCAAAGCG
Product: alanine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MRIGVPKEIKTAESRVAITPAGVEAFVKNGHEVYIEKDAGLGSGITNEEYEKAGAKILPTAKEVYDIADMIMKVKEPQPS EYDYLKEGQVLFTYLHLAPDKQQTEALLRQKVVGIAYETVQLDNGSLPLLTPMSEVAGRMAVTIGAYLLTSINQGRGIVM GGVPGVEPAEVVIIGGGTVGTNAAKVAVGMGARVTILDVNPARLAYLDDIFGGRVTTLMSNSFNIAESVKKADLLIGAVL IPGARAPKLVTEEMVKTMKKGAVIVDVAIDQGGCVETCDRTTSHTDPYFIKHGVVHYSVPNIPGAVPRTSTFALTNVTLP YALEIANKGYKRALLENRALLKGLNVYKGMVTYKPVAEAQGLEYVDPVEALNKA
Sequences:
>Translated_374_residues MRIGVPKEIKTAESRVAITPAGVEAFVKNGHEVYIEKDAGLGSGITNEEYEKAGAKILPTAKEVYDIADMIMKVKEPQPS EYDYLKEGQVLFTYLHLAPDKQQTEALLRQKVVGIAYETVQLDNGSLPLLTPMSEVAGRMAVTIGAYLLTSINQGRGIVM GGVPGVEPAEVVIIGGGTVGTNAAKVAVGMGARVTILDVNPARLAYLDDIFGGRVTTLMSNSFNIAESVKKADLLIGAVL IPGARAPKLVTEEMVKTMKKGAVIVDVAIDQGGCVETCDRTTSHTDPYFIKHGVVHYSVPNIPGAVPRTSTFALTNVTLP YALEIANKGYKRALLENRALLKGLNVYKGMVTYKPVAEAQGLEYVDPVEALNKA >Mature_374_residues MRIGVPKEIKTAESRVAITPAGVEAFVKNGHEVYIEKDAGLGSGITNEEYEKAGAKILPTAKEVYDIADMIMKVKEPQPS EYDYLKEGQVLFTYLHLAPDKQQTEALLRQKVVGIAYETVQLDNGSLPLLTPMSEVAGRMAVTIGAYLLTSINQGRGIVM GGVPGVEPAEVVIIGGGTVGTNAAKVAVGMGARVTILDVNPARLAYLDDIFGGRVTTLMSNSFNIAESVKKADLLIGAVL IPGARAPKLVTEEMVKTMKKGAVIVDVAIDQGGCVETCDRTTSHTDPYFIKHGVVHYSVPNIPGAVPRTSTFALTNVTLP YALEIANKGYKRALLENRALLKGLNVYKGMVTYKPVAEAQGLEYVDPVEALNKA
Specific function: May play a role in cell wall synthesis as L-alanine is an important constituent of the peptidoglycan layer [H]
COG id: COG0686
COG function: function code E; Alanine dehydrogenase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=350, Percent_Identity=32.2857142857143, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI122939153, Length=350, Percent_Identity=32.2857142857143, Blast_Score=139, Evalue=4e-33, Organism=Escherichia coli, GI1787887, Length=335, Percent_Identity=31.9402985074627, Blast_Score=130, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17550456, Length=347, Percent_Identity=31.4121037463977, Blast_Score=157, Evalue=8e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR008141 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.4.1.1 [H]
Molecular weight: Translated: 39987; Mature: 39987
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGVPKEIKTAESRVAITPAGVEAFVKNGHEVYIEKDAGLGSGITNEEYEKAGAKILPT CCCCCCCHHHHCCCEEEEECCCHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCEECCC AKEVYDIADMIMKVKEPQPSEYDYLKEGQVLFTYLHLAPDKQQTEALLRQKVVGIAYETV HHHHHHHHHHHHHHCCCCCCCCCHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHEEEEEE QLDNGSLPLLTPMSEVAGRMAVTIGAYLLTSINQGRGIVMGGVPGVEPAEVVIIGGGTVG EECCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCC TNAAKVAVGMGARVTILDVNPARLAYLDDIFGGRVTTLMSNSFNIAESVKKADLLIGAVL CCCEEEEECCCCEEEEEECCCHHHHHHHHHCCCEEEEHHCCCCCHHHHHHHHHHHEEHEE IPGARAPKLVTEEMVKTMKKGAVIVDVAIDQGGCVETCDRTTSHTDPYFIKHGVVHYSVP CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHCCCCCCCCCEEEECCEEEEECC NIPGAVPRTSTFALTNVTLPYALEIANKGYKRALLENRALLKGLNVYKGMVTYKPVAEAQ CCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEECCHHHHC GLEYVDPVEALNKA CCCCCCHHHHHHCC >Mature Secondary Structure MRIGVPKEIKTAESRVAITPAGVEAFVKNGHEVYIEKDAGLGSGITNEEYEKAGAKILPT CCCCCCCHHHHCCCEEEEECCCHHHHHCCCCEEEEEECCCCCCCCCCHHHHHCCCEECCC AKEVYDIADMIMKVKEPQPSEYDYLKEGQVLFTYLHLAPDKQQTEALLRQKVVGIAYETV HHHHHHHHHHHHHHCCCCCCCCCHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHEEEEEE QLDNGSLPLLTPMSEVAGRMAVTIGAYLLTSINQGRGIVMGGVPGVEPAEVVIIGGGTVG EECCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCC TNAAKVAVGMGARVTILDVNPARLAYLDDIFGGRVTTLMSNSFNIAESVKKADLLIGAVL CCCEEEEECCCCEEEEEECCCHHHHHHHHHCCCEEEEHHCCCCCHHHHHHHHHHHEEHEE IPGARAPKLVTEEMVKTMKKGAVIVDVAIDQGGCVETCDRTTSHTDPYFIKHGVVHYSVP CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHCCCCCCCCCEEEECCEEEEECC NIPGAVPRTSTFALTNVTLPYALEIANKGYKRALLENRALLKGLNVYKGMVTYKPVAEAQ CCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEECCHHHHC GLEYVDPVEALNKA CCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA