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The map label for this gene is DppC [H]

Identifier: 20806589

GI number: 20806589

Start: 64613

End: 65494

Strand: Direct

Name: DppC [H]

Synonym: TTE0056

Alternate gene names: 20806589

Gene position: 64613-65494 (Clockwise)

Preceding gene: 20806588

Following gene: 20806590

Centisome position: 2.4

GC content: 35.26

Gene sequence:

>882_bases
ATGAGAAAAGAGAGTTTGAAAAATTTTTATTATGATTATATACAACCGCTTTTGGTTAATAAAAAATCATTAATTGGACT
TATCATACTAACCTTCTTCATTTTGATGGCAACTGTTGGACCTCTAATTGTACCTTTAGATATGACTTCTAATTTTGCAG
AAAGATATCAGAAGCCTTCTTTAAAGCATCCTTTTGGGACGGATTATTTCGGGGTGGACATTTTTCAACAAATTGTTCAC
GGTTCTAGATCTGTAATATCTCTTACAATGCTTGCTAGCTTTTTTGCAGTTCTTATAGGTACAGTAATAGGGGTTGCAAG
AGGTTACTTAGAAGGGATTGTAGGCAGAGCAATAGATGCTATTATAATGGTTTTCTTGGTTATACCTTCTTTTCCTGCGC
TTCTCATATTAGCGGCAGTATTTATGAATTACAATTTAAACGTGGTGGAAATCGCCTTGTTAGTGGCTGTTTGGCTATGG
GCTCCACTAGCAAAGCAGATCTCTGCTCAAGTGCTTTCTTTGAAGTCTAAAGAGTTTGTTGAAGCTTCTAAAATGCTTAA
CATGCCTTTAAGATATATATTATTTAGTGATATTGCAAAACTTTTGATTCCCTACATTTTTATCAACTTTGTAATGCAGA
TAAAAGGAGCAATGGAATTTTCTGTTGGGCTTATGTTTCTAGGGTTAGCTAAATTTGACCCAACCCACTGGGGTATAATG
TTAAATTACGCGCTCTATCAAGCAGGAGCCTTGTATACTGCTAAAGGATTTCACTATATATTTTTCATAATCTTAAACAT
AGTGCTTCTAATTTACGGCGGAATACTCTTATCACAAGGGGTTGAAGAAGTATTCAACCCGCGTCTTAGGGGGAATGAAT
AA

Upstream 100 bases:

>100_bases
TTTTAACAGGACTTTTTAGTTTAATTGTAATAGGTGTAATAGTGGCAACTTTTGTAGCAGATTTTGTGTACGCATTAATT
GATCCGAGGGTGAAGTTAAA

Downstream 100 bases:

>100_bases
TTGAGCATAATCATAAGAGTTGAGGACTTAAGAGCAGTTTATTTAGTAAGAGAAGGGACTATAAAAGCTGCTGATGGGAT
TTCGCTAGATATTTTGGAAA

Product: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MRKESLKNFYYDYIQPLLVNKKSLIGLIILTFFILMATVGPLIVPLDMTSNFAERYQKPSLKHPFGTDYFGVDIFQQIVH
GSRSVISLTMLASFFAVLIGTVIGVARGYLEGIVGRAIDAIIMVFLVIPSFPALLILAAVFMNYNLNVVEIALLVAVWLW
APLAKQISAQVLSLKSKEFVEASKMLNMPLRYILFSDIAKLLIPYIFINFVMQIKGAMEFSVGLMFLGLAKFDPTHWGIM
LNYALYQAGALYTAKGFHYIFFIILNIVLLIYGGILLSQGVEEVFNPRLRGNE

Sequences:

>Translated_293_residues
MRKESLKNFYYDYIQPLLVNKKSLIGLIILTFFILMATVGPLIVPLDMTSNFAERYQKPSLKHPFGTDYFGVDIFQQIVH
GSRSVISLTMLASFFAVLIGTVIGVARGYLEGIVGRAIDAIIMVFLVIPSFPALLILAAVFMNYNLNVVEIALLVAVWLW
APLAKQISAQVLSLKSKEFVEASKMLNMPLRYILFSDIAKLLIPYIFINFVMQIKGAMEFSVGLMFLGLAKFDPTHWGIM
LNYALYQAGALYTAKGFHYIFFIILNIVLLIYGGILLSQGVEEVFNPRLRGNE
>Mature_293_residues
MRKESLKNFYYDYIQPLLVNKKSLIGLIILTFFILMATVGPLIVPLDMTSNFAERYQKPSLKHPFGTDYFGVDIFQQIVH
GSRSVISLTMLASFFAVLIGTVIGVARGYLEGIVGRAIDAIIMVFLVIPSFPALLILAAVFMNYNLNVVEIALLVAVWLW
APLAKQISAQVLSLKSKEFVEASKMLNMPLRYILFSDIAKLLIPYIFINFVMQIKGAMEFSVGLMFLGLAKFDPTHWGIM
LNYALYQAGALYTAKGFHYIFFIILNIVLLIYGGILLSQGVEEVFNPRLRGNE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=294, Percent_Identity=25.1700680272109, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1787760, Length=276, Percent_Identity=27.1739130434783, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789889, Length=195, Percent_Identity=28.2051282051282, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787498, Length=254, Percent_Identity=26.7716535433071, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32929; Mature: 32929

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRKESLKNFYYDYIQPLLVNKKSLIGLIILTFFILMATVGPLIVPLDMTSNFAERYQKPS
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCC
LKHPFGTDYFGVDIFQQIVHGSRSVISLTMLASFFAVLIGTVIGVARGYLEGIVGRAIDA
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIMVFLVIPSFPALLILAAVFMNYNLNVVEIALLVAVWLWAPLAKQISAQVLSLKSKEFV
HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EASKMLNMPLRYILFSDIAKLLIPYIFINFVMQIKGAMEFSVGLMFLGLAKFDPTHWGIM
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LNYALYQAGALYTAKGFHYIFFIILNIVLLIYGGILLSQGVEEVFNPRLRGNE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]