Definition Borrelia recurrentis A1, complete genome.
Accession NC_011244
Length 930,981

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The map label for this gene is rpoB

Identifier: 203287837

GI number:

Start: 422058

End: 425525

Strand: Reverse

Name: rpoB

Synonym: BRE_387

Alternate gene names: NA

Gene position: NA

Preceding gene: 203287838

Following gene: 203287836

Centisome position: NA

GC content: NA

Gene sequence:

>3468_bases
ATGATAAAAAGGGTTCATCTAGGACAAGGAAAAGCCGAAGAAATCTTAAACTTACCTAACCTAATAGAAATACAATTGAA
TTCTTATGAAAAATTTTTGCAACTTGAGAGATTAAAAAATAATAAACCTTTGCTCAATGAGGGCCTTGAATCTGTGTTTA
GAGATGTTTTTCCTATGAAAAGTAGCAATGGTGAGGTTGCTCTTGAATATGAAAAATATTATATTGAATATGATTCTATT
AGCTTTACTGAGAAAGAGTGTAAAAGAAAGGGGCAAAGTTATGAGGCTGTTTTAAAGATAAGATTAAACTTACAGTTTCT
AACAACAGGAGAGATAAGACAAAAAGATGTTTATATGGGAACTATTCCTTTAATGACAGATAGAGGAACTTTTATCGTTA
ATGGTGCAGAAAGAGTCATTGTATCACAAATTCATAGATCTCCGGGGGTTGTTTTTTATAAGGAAAAAGATTTATATTAT
GCTCGTATTATTCCTTATCGTGGTTCTTGGCTTGAATTTGAGATTGACTCAAAAAAGGATTACCTTTATGTTAAGATAGA
CAGAAAAAAAAGAATATTAGTTACTCTTTTCTTAAGAGCTTTAGGTCTTGATACTAGAGAAAAAATAATAGAGACTTTTT
ATAAGATTAGAAAAATTGAAGTAAATGATGATACTAAAAGAGAGATTACAGGACAGTATTTAGCTACAAACATTACTATA
AAAGAAAATATGACTTATCGGGCAGGTGATAAGATAACTTTGCAAGATATTGAAGATTTTTTGCAAAATGGAGTTAAAGA
AATAAACTTGATTGATTTTGATGGGTATGATAGTGTTCCTGGAAAACATTTCATTAGTTCCGATGTTATTTTAAATTGTT
TTGAAAAAGAAGATGCTTATTTTGCTTTAAAAGATGGATTTAAGGAGCTTTCACGAGAATCCGTGATGCTTGCAGTTTAT
AGTGTACTTTTGCCTGGTGAACCAATATCAATTGACAATGCTGAGAACGATTTAAGAACTATATTTTTTTCAGAAAAAAG
ATATGATTTAGGTCATGTAGGAAGATATAAACTTTCTAAGAAGTTTGGTCTTGATGATCTTACAACATCAGTTCTTACTA
TGACAGATATAGTAAATACTATATCTCATCTTTTAAGAATATATGATGGGCATGATGTTCTTGATGATATAGATCATCTT
GGAAATAGAAGAGTGCGTTCTGTTGGTGAGTTACTTACAAACATATATAAAGGTGCAATGTCAAGAGTAGAAAAAATTGC
AAAGGACAGAATGTCTAATAAAGAAGTATTCAATTTGAAACCTCAAGAATTAATTAGTGTTAAGCCCGTTGTTTCTGCTG
TTAAAGAATTTTTTGCAACCAGTCAGCTTTCTCAGTTTATGGATCAGGTTAATCCTTTAGCCGAACTTACGCATAAGAGA
CGTCTTAATGCATTGGGTCCTGGTGGACTCTCAAGGGATCGAGCAGGTTTTGAAGTAAGAGATGTACATTATACTCATTA
TGGTAGGATGTGTCCTATTGAAACTCCTGAAGGCCCAAATATTGGACTTATTGTTTCTTTGGCTACTTATTCAAAAGTTA
ATGATTATGGTTTCTTAGAAACTCCTTATAGGAAGGTGATTGATGGTAAGGTGACCGATGATATTGAATATTTGTCTGCT
ATTGATGAGGAAAAAAAATGTATTGCGCAAGCAAATGCTTCTGTTAGTTCTGATGGTAATTATACTGATGATTTGGTGTC
TGTTAGGATTTCTGGGGATTATACTACAATGATGCCTAAAAATATCGATTACATGGATGTTTCGCCTAGACAATTAATAT
CTGTCTCTTCGGCGTTAATACCTTTTCTTGAACATAATGATGCAAATCGTGCTCTTATGGGTTCGAATATGCAACGTCAG
GCAGTTCCTTTATTATTTCCACAGCCACCTATTGTTGGTACAGGTATGGAGAGGATAGTTGCAAAAGACTCTGGTGTTGT
TATTAAAGCAAAAAGACCTGGTAGAGTTGTCTTAGCCACAAACAAAAAGATAGTTATTAAACCTGATAATGCAACTTCTG
AACGAGATTTAGATGAATATGAACTTTATAAATATGAGAGGACAAACCAGGATACTTCTTTCAATCATTCAGTTTTGGTG
AAGAATGGCCAAATTGTTAATAAGGATGAGATAATAGCAGATGGTCCTGCTACTAGATATGGAGAATTGGCGCTTGGTAA
TAATTTATTAGTTGGTTTTATTCCGTGGAATGGATTTAATTATGAGGATGCTATTTTAATTTCTGAGAGAATTGTAAAGG
AAGATCTTTATACTTCAATTCATATTAAAGAATTTAGCATTGAAGTAAGAGAGACTAAGCTTGGACCTGAAAAAGTTACG
GCTGATATTCCTAATGTTAGTGGAAAGATATTGAGTAAACTTGACGAAAATGGAATTGTAAGAATAGGGACTTATGTAAA
ACCAGGTGATATTTTAATTGGTAAAGTTACTCCAAAATCAGAAGGAGATATTACCCCTGAATTTAAACTTTTAACTTCTA
TATTTGGTGAGAAAGCAAAGGATGTTAAGAATAATTCATTAAAAGTTCCTCATGGTACTGAAGGAACTGTAATTGATGTT
CAAAGAATTACTAAAGATGATGTTGGAAATCTTCCACCTGGTGTGGATGAAATATTAAAGGTTTATATTGCCAAAAAAAG
AAAACTTAAAGAAGGTGATAAAATGGCAGGAAGACATGGAAATAAGGGTGTAGTTGCAAAGATTCTTCCTGTTGAAGATA
TGCCATATCTTGCAGATGGGACCCCTCTTGATATATGCTTGAATCCTTTGGGAGTGCCATCTCGTATGAATATTGGACAA
TTGATGGAATCTCAGCTTGGTCTTGCTGGTAAGTATCTTGGCGAATATTATGATGTTCCTGTTTTTGAGTCTGCTACAAA
TGAATGTATTCAAGAAAAGTTAAAAAAAGCTGGATTTAATGAGACGTCAAAGGCAGTCTTGTATGATGGATATACAGGTG
AACCATTTGAAAATGAAGTTATGGTTGGAGTTATATATATGTTGAAACTTCATCATCTTGTTGATGATAAGATGCATGCA
AGGTCTACAGGTCCTTATTCACTTGTATCTCAACAACCTCTTGGAGGAAAAGCTCAATTTGGTGGACAAAGACTTGGAGA
GATGGAAGTTTGGGCTCTTGAAGCTTATGGAGCTGCGCATACTTTGCAAGAATTATTAACAGTAAAGTCAGATGATATGT
CAGGAAGAGTTAAGATATATGAAAATATTGTTAAGGGCATTCCTACTAACGTATCTGGAATTCCTGAATCTTTCAATGTT
TTGATGCAGGAACTAAGAGGTCTTGGTTTTGATTTATCTATTTATGATGATAATGGAAATCAAATTCCTTTAACAGAAAA
GGAAGAGGAATTAATTAATAAGACTTAG

Upstream 100 bases:

>100_bases
GTTGAAATTAAGTAAAGCATTAAAAATATGCCAAATTTTTTATTCCACATGTCGTTTAAGTGGCATGTGGTTTATTGTGT
CTTAAAAAAGGAGTCTTTTA

Downstream 100 bases:

>100_bases
GTTTTGAGGATTTTATGAAAGAGATAAAAGATTTTGAAAAGATAAGAATAAAAATAGCATCTCCTGACCAAATTAGAAGT
TGGTCTTATGGAGAAGTTAA

Product: DNA-directed RNA polymerase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1155_residues
MIKRVHLGQGKAEEILNLPNLIEIQLNSYEKFLQLERLKNNKPLLNEGLESVFRDVFPMKSSNGEVALEYEKYYIEYDSI
SFTEKECKRKGQSYEAVLKIRLNLQFLTTGEIRQKDVYMGTIPLMTDRGTFIVNGAERVIVSQIHRSPGVVFYKEKDLYY
ARIIPYRGSWLEFEIDSKKDYLYVKIDRKKRILVTLFLRALGLDTREKIIETFYKIRKIEVNDDTKREITGQYLATNITI
KENMTYRAGDKITLQDIEDFLQNGVKEINLIDFDGYDSVPGKHFISSDVILNCFEKEDAYFALKDGFKELSRESVMLAVY
SVLLPGEPISIDNAENDLRTIFFSEKRYDLGHVGRYKLSKKFGLDDLTTSVLTMTDIVNTISHLLRIYDGHDVLDDIDHL
GNRRVRSVGELLTNIYKGAMSRVEKIAKDRMSNKEVFNLKPQELISVKPVVSAVKEFFATSQLSQFMDQVNPLAELTHKR
RLNALGPGGLSRDRAGFEVRDVHYTHYGRMCPIETPEGPNIGLIVSLATYSKVNDYGFLETPYRKVIDGKVTDDIEYLSA
IDEEKKCIAQANASVSSDGNYTDDLVSVRISGDYTTMMPKNIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQ
AVPLLFPQPPIVGTGMERIVAKDSGVVIKAKRPGRVVLATNKKIVIKPDNATSERDLDEYELYKYERTNQDTSFNHSVLV
KNGQIVNKDEIIADGPATRYGELALGNNLLVGFIPWNGFNYEDAILISERIVKEDLYTSIHIKEFSIEVRETKLGPEKVT
ADIPNVSGKILSKLDENGIVRIGTYVKPGDILIGKVTPKSEGDITPEFKLLTSIFGEKAKDVKNNSLKVPHGTEGTVIDV
QRITKDDVGNLPPGVDEILKVYIAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPLGVPSRMNIGQ
LMESQLGLAGKYLGEYYDVPVFESATNECIQEKLKKAGFNETSKAVLYDGYTGEPFENEVMVGVIYMLKLHHLVDDKMHA
RSTGPYSLVSQQPLGGKAQFGGQRLGEMEVWALEAYGAAHTLQELLTVKSDDMSGRVKIYENIVKGIPTNVSGIPESFNV
LMQELRGLGFDLSIYDDNGNQIPLTEKEEELINKT

Sequences:
NA

Specific function: NA

COG id: COG0085

COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA