Definition Borrelia duttonii Ly, complete genome.
Accession NC_011229
Length 931,674

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The map label for this gene is pdxK

Identifier: 203284661

GI number: 203284661

Start: 825069

End: 825863

Strand: Reverse

Name: pdxK

Synonym: BDU_772

Alternate gene names: NA

Gene position: 825863-825069 (Counterclockwise)

Preceding gene: 203284662

Following gene: 203284660

Centisome position: 88.64

GC content: 25.41

Gene sequence:

>795_bases
ATGAAACGAGTATTAGCCATGCATGATATTTCAACCATAGGTAAAGCATCACTTACAATATGCATACCAGTAATATCATC
ATTTAATATTCAAGTTTGTCCACTAGTAACTGCCGTTCTCTCTGCAACAACAAATTACAAAGAATTCGAAATAATAGATT
TAACAAATAAATTAAAAAAGTTTATACTATCCTGGAAAAATCAAAATGAAAATTTTGATATATTTTATAGTGGATTTCTT
GGCAACAACAAACAACACAAAATAATAGAACAAATTCTAAAACTATTTAAATTTAAAAAAATAATAATTGATCCTGTTTT
TGCAGACAATAACATGCTCTACCCTACTTTTGATTACAAAATAGTAAGTGGTTTTAGAGAAATAATAAAACATGCAGACA
TAATAACACCAAATATCACAGAATTAAAAATGTTAGCAAAAACTGAAAAAATTAGAAATAAAGATGAAATAATAAAAGCA
ACATCAAATCTTGAAATAAAAGGAACAATCATAGTTACAAGCATAGAAAAAGACAATCTCATAGGAACCGCTGCTTACAA
TACAAAAACAAAAGAATATTCGGAATTTTTTTTAGAAAAATTAGAACAAAATTTTAGTGGAACAGGAGACCTATTTACAA
GCTTACTAATAGGATATCTTGAAACATATGAAATAGAATACGCATTAAAACAAGCAACTAAAGTCACTCACTCAATAATA
AAACATTCTACTCTAAACAATAATTCGACAAAAAAAGACATTCAAATTGAATTTTTTTTAAAAAATAATTTTTAA

Upstream 100 bases:

>100_bases
GAATTGGATATCTTATGTATTTAAAATATGGAGCAAGTTCCATTGAAACTAATGCAAACTCAAGAATAGAAAATTATAAA
TATACAAAAGGAGTAAAATT

Downstream 100 bases:

>100_bases
CATATTGCAATAATAAAAACCATTTATTTTAGTCTAATAAATGATTTATTATTTAAAAGAAAAAATGCAATATTTGCATT
AAAATACATTATTAAATTAA

Product: pyridoxal kinase

Products: ADP; pyridoxal 5'-phosphate

Alternate protein names: Pyridoxamine Kinase; Pyridoxine Kinase; Pyridoxal/Pyridoxine/Pyridoxamine Kinase; Pyridoxine Kinase Family Protein; Phosphomethylpyrimidine Kinase; Pyridoxal Kinase-Like Protein; Pyridoxal Kinase Related Protein; Pyridoxal/Pyridoxine/Pyridoxamine Kinase-Like Protein; Pyridoxamine Kinase PdxY

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MKRVLAMHDISTIGKASLTICIPVISSFNIQVCPLVTAVLSATTNYKEFEIIDLTNKLKKFILSWKNQNENFDIFYSGFL
GNNKQHKIIEQILKLFKFKKIIIDPVFADNNMLYPTFDYKIVSGFREIIKHADIITPNITELKMLAKTEKIRNKDEIIKA
TSNLEIKGTIIVTSIEKDNLIGTAAYNTKTKEYSEFFLEKLEQNFSGTGDLFTSLLIGYLETYEIEYALKQATKVTHSII
KHSTLNNNSTKKDIQIEFFLKNNF

Sequences:

>Translated_264_residues
MKRVLAMHDISTIGKASLTICIPVISSFNIQVCPLVTAVLSATTNYKEFEIIDLTNKLKKFILSWKNQNENFDIFYSGFL
GNNKQHKIIEQILKLFKFKKIIIDPVFADNNMLYPTFDYKIVSGFREIIKHADIITPNITELKMLAKTEKIRNKDEIIKA
TSNLEIKGTIIVTSIEKDNLIGTAAYNTKTKEYSEFFLEKLEQNFSGTGDLFTSLLIGYLETYEIEYALKQATKVTHSII
KHSTLNNNSTKKDIQIEFFLKNNF
>Mature_264_residues
MKRVLAMHDISTIGKASLTICIPVISSFNIQVCPLVTAVLSATTNYKEFEIIDLTNKLKKFILSWKNQNENFDIFYSGFL
GNNKQHKIIEQILKLFKFKKIIIDPVFADNNMLYPTFDYKIVSGFREIIKHADIITPNITELKMLAKTEKIRNKDEIIKA
TSNLEIKGTIIVTSIEKDNLIGTAAYNTKTKEYSEFFLEKLEQNFSGTGDLFTSLLIGYLETYEIEYALKQATKVTHSII
KHSTLNNNSTKKDIQIEFFLKNNF

Specific function: Unknown

COG id: COG2240

COG function: function code H; Pyridoxal/pyridoxine/pyridoxamine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.1.35

Molecular weight: Translated: 30317; Mature: 30317

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVLAMHDISTIGKASLTICIPVISSFNIQVCPLVTAVLSATTNYKEFEIIDLTNKLKK
CCCEEEHHHHHHCCCCHHEEEEEECCCCCEEHHHHHHHHHHCCCCCCEEEEEEHHHHHHH
FILSWKNQNENFDIFYSGFLGNNKQHKIIEQILKLFKFKKIIIDPVFADNNMLYPTFDYK
HHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCEEECCCCHH
IVSGFREIIKHADIITPNITELKMLAKTEKIRNKDEIIKATSNLEIKGTIIVTSIEKDNL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHEECCCCEEEEEEEEEEEECCCCE
IGTAAYNTKTKEYSEFFLEKLEQNFSGTGDLFTSLLIGYLETYEIEYALKQATKVTHSII
EEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHSTLNNNSTKKDIQIEFFLKNNF
HHCCCCCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MKRVLAMHDISTIGKASLTICIPVISSFNIQVCPLVTAVLSATTNYKEFEIIDLTNKLKK
CCCEEEHHHHHHCCCCHHEEEEEECCCCCEEHHHHHHHHHHCCCCCCEEEEEEHHHHHHH
FILSWKNQNENFDIFYSGFLGNNKQHKIIEQILKLFKFKKIIIDPVFADNNMLYPTFDYK
HHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCEEECCCCHH
IVSGFREIIKHADIITPNITELKMLAKTEKIRNKDEIIKATSNLEIKGTIIVTSIEKDNL
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHEECCCCEEEEEEEEEEEECCCCE
IGTAAYNTKTKEYSEFFLEKLEQNFSGTGDLFTSLLIGYLETYEIEYALKQATKVTHSII
EEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KHSTLNNNSTKKDIQIEFFLKNNF
HHCCCCCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; pyridoxal

Specific reaction: ATP + pyridoxal = ADP + pyridoxal 5'-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA