| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
Click here to switch to the map view.
The map label for this gene is 203284587
Identifier: 203284587
GI number: 203284587
Start: 742259
End: 742711
Strand: Reverse
Name: 203284587
Synonym: BDU_693
Alternate gene names: NA
Gene position: 742711-742259 (Counterclockwise)
Preceding gene: 203284602
Following gene: 203284580
Centisome position: 79.72
GC content: 28.04
Gene sequence:
>453_bases ATGCAAAAAAAAATTCCTATCATTATTTTATTCCTCACAAGTCAATGCGCACTAATGGGCACCAATAAAGACTTAGCTTT TCTTTACTCAGATATTCATAAATTAAGAGATAATTTAAATTTAAAAAAATTAGAGATAGATCAAACCCTTGAAATTGTAG CAAAAGAATATGCAATAAATTTAGATAAAAATGACGTATTAACACATACACTATTTGGAACAACTCCAATGCAACGAGTA AGCAAATATGATAAAAATTTTTGCAGAATAAGAGAAATTTTAGCAGCAAAAATGGAAGTTCAAGATGTAACGGATGCATG GCTTCAAAGTCCAAAACACAAAGAAGCCCTAATAAATAAGGATACAAGCAAAATAGGTGGATATGTATTACGCACAAAAG ATAATAAAAATATATTTGTGGTTCTTTTTGGAGAAAAATGTAAAAAAATTTGA
Upstream 100 bases:
>100_bases CTTTTTCTAAATGACCTAAATGATTTTCCAAATTATCCTCCTATTTTATATAATTACATATATGTTATAATTATATCATT TTAGTATAAGTAGGTTTATT
Downstream 100 bases:
>100_bases CATAAATCAAGTTTATCTTATATAATTTCTATTGATACTAAAGGGTTTATAGCTCAGGTGGTCAGAGCGCCTGCCTTACA AGCAGGACGTCGGGGGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MQKKIPIIILFLTSQCALMGTNKDLAFLYSDIHKLRDNLNLKKLEIDQTLEIVAKEYAINLDKNDVLTHTLFGTTPMQRV SKYDKNFCRIREILAAKMEVQDVTDAWLQSPKHKEALINKDTSKIGGYVLRTKDNKNIFVVLFGEKCKKI
Sequences:
>Translated_150_residues MQKKIPIIILFLTSQCALMGTNKDLAFLYSDIHKLRDNLNLKKLEIDQTLEIVAKEYAINLDKNDVLTHTLFGTTPMQRV SKYDKNFCRIREILAAKMEVQDVTDAWLQSPKHKEALINKDTSKIGGYVLRTKDNKNIFVVLFGEKCKKI >Mature_150_residues MQKKIPIIILFLTSQCALMGTNKDLAFLYSDIHKLRDNLNLKKLEIDQTLEIVAKEYAINLDKNDVLTHTLFGTTPMQRV SKYDKNFCRIREILAAKMEVQDVTDAWLQSPKHKEALINKDTSKIGGYVLRTKDNKNIFVVLFGEKCKKI
Specific function: Unknown
COG id: COG2340
COG function: function code S; Uncharacterized protein with SCP/PR1 domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014044 [H]
Pfam domain/function: PF00188 SCP [H]
EC number: NA
Molecular weight: Translated: 17302; Mature: 17302
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKKIPIIILFLTSQCALMGTNKDLAFLYSDIHKLRDNLNLKKLEIDQTLEIVAKEYAIN CCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCC LDKNDVLTHTLFGTTPMQRVSKYDKNFCRIREILAAKMEVQDVTDAWLQSPKHKEALINK CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC DTSKIGGYVLRTKDNKNIFVVLFGEKCKKI CCHHHCCEEEEEECCCCEEEEEECCCCCCC >Mature Secondary Structure MQKKIPIIILFLTSQCALMGTNKDLAFLYSDIHKLRDNLNLKKLEIDQTLEIVAKEYAIN CCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCC LDKNDVLTHTLFGTTPMQRVSKYDKNFCRIREILAAKMEVQDVTDAWLQSPKHKEALINK CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC DTSKIGGYVLRTKDNKNIFVVLFGEKCKKI CCHHHCCEEEEEECCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]