| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203284359
Identifier: 203284359
GI number: 203284359
Start: 482641
End: 482952
Strand: Reverse
Name: 203284359
Synonym: BDU_448
Alternate gene names: NA
Gene position: 482952-482641 (Counterclockwise)
Preceding gene: 203284360
Following gene: 203284358
Centisome position: 51.84
GC content: 25.32
Gene sequence:
>312_bases GTGAAGGAGAAATTTATGGAACCTAAAATACAAGCCATCAATTATCATTTAAATGATGATATGAAAGATTTTATTTTAAA AAAACTAGATAAAATTGGAACACACATTAAACAACATGCAGAAAGTCTTAAAATCACAATAAAAAAAGAAAATGATATTT TTGATATAGATGCTCACCTCCACTTTAACTGGGGCAAAATAATACATATTACAGAAGAAGGAAAGGAATTACATGCCTTA ACAGAAAGATTAATAGAAAGATTACAAAACACAGCAAATAAAGAAAAAAGTAAAAAAGATACAATAAAATAA
Upstream 100 bases:
>100_bases AATAAAAATATGGTAGATAGTCAAATTTCTGATATACTAAAATCTAAAGGAATCACTATTTCAAGAAGAACTGTAAACAA ATATAGGAATGAATTAAAAT
Downstream 100 bases:
>100_bases ACAAGTAAAATTAAATGCAAACAACAATTGAAATAACAAACAAAGAGGGACTACATGCAAGACCATCAAGTATGATTTCA GAACTTGCAAACAAATATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MKEKFMEPKIQAINYHLNDDMKDFILKKLDKIGTHIKQHAESLKITIKKENDIFDIDAHLHFNWGKIIHITEEGKELHAL TERLIERLQNTANKEKSKKDTIK
Sequences:
>Translated_103_residues MKEKFMEPKIQAINYHLNDDMKDFILKKLDKIGTHIKQHAESLKITIKKENDIFDIDAHLHFNWGKIIHITEEGKELHAL TERLIERLQNTANKEKSKKDTIK >Mature_103_residues MKEKFMEPKIQAINYHLNDDMKDFILKKLDKIGTHIKQHAESLKITIKKENDIFDIDAHLHFNWGKIIHITEEGKELHAL TERLIERLQNTANKEKSKKDTIK
Specific function: Unknown
COG id: COG1544
COG function: function code J; Ribosome-associated protein Y (PSrp-1)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12217; Mature: 12217
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS00482 DIHYDROOROTASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKFMEPKIQAINYHLNDDMKDFILKKLDKIGTHIKQHAESLKITIKKENDIFDIDAHL CCCCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECEE HFNWGKIIHITEEGKELHALTERLIERLQNTANKEKSKKDTIK EECCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKEKFMEPKIQAINYHLNDDMKDFILKKLDKIGTHIKQHAESLKITIKKENDIFDIDAHL CCCCCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECEE HFNWGKIIHITEEGKELHALTERLIERLQNTANKEKSKKDTIK EECCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA