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The map label for this gene is cof [C]

Identifier: 203284331

GI number: 203284331

Start: 451293

End: 452180

Strand: Reverse

Name: cof [C]

Synonym: BDU_417

Alternate gene names: 203284331

Gene position: 452180-451293 (Counterclockwise)

Preceding gene: 203284335

Following gene: 203284330

Centisome position: 48.53

GC content: 27.03

Gene sequence:

>888_bases
ATGCCTCGTAAATTTGATGTGATATCATTTATTTTAAAAGAGGATATTGCAATGAATGCCAATTATGAAAAGTATAAGAT
GTTGGTTTTTGATCTTGATGGGACTTTACTTAATAGTAAGCATGAAATTACCCCATTGACCCTTAAGGTTTTATTAAGGT
TGAGAGATGATTTTCATATAATTATTGCTACTGGTAGAAGATTATATGAAATTAGGGATATTTTGCTTCAGCTTCAAGAC
TTAAGAATTAATGAGGGTTATATTGTAACAGCCAATGGATCTGAGGTATTTTTAAATAATGATCTTTTATTAAGATGTAG
TATTGATTATGGTATAGTAAGAGAAATTTTTAAGGTAGATAGAGAAGGTATTGATATTAATCTTTATGATCTTCATGATT
GGTATTCTGATAGAGAGATTAGAAGTCCAATTATGAATCATTTTATTCAAAATTTGGGAATAAAACCAATTATTACTGAT
TTATCTGAGCTTAAAATAAATTCTTGTTCTAAGATAGTTTATTATTCTCATGATTTACTGAGGCTTGAAGAATTTGCAAA
TACTCTTAGAGAGAAAAATTTTAAAGGCATAAGTATGTTTTATTCTGCTAATGATCTTTTTGAAATTACAAATGTTGATG
CTAGCAAATATAATGCTATTAAAAATATTTCTTTGTGTGAATGTATTGGCGTTGATTCTATTTTGGCATTTGGTGATAAT
GGCAATGATTATGAAATGTTAAAAAATGTTGGTAAGGGCATTTTAATGAAAAATGCACATGATCGTGTTAAGAATAGTTT
GCCAAACAATGAGCTTACAAAATTTTGTAATGATAATGATGGGGTTGCAAAATTTTTAATAGAATTTTTTGATCTTGATA
TTAATTAA

Upstream 100 bases:

>100_bases
AATCTTATCACTCATTAATCTTTACATTTAACTCTCTATTTTTAACCTTTGTAAACATAATAATTATATTTTTTTTATTA
ATTTAATTCAAGGCAAAACT

Downstream 100 bases:

>100_bases
TTTTTGTTTTTATTCTTTTTTTAATCTTAAAAAAATATTTGATAAAAAGTGTAATAATGGTATTGACATAGTAAAATTAA
AAGTATATATTATTTTATGT

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MPRKFDVISFILKEDIAMNANYEKYKMLVFDLDGTLLNSKHEITPLTLKVLLRLRDDFHIIIATGRRLYEIRDILLQLQD
LRINEGYIVTANGSEVFLNNDLLLRCSIDYGIVREIFKVDREGIDINLYDLHDWYSDREIRSPIMNHFIQNLGIKPIITD
LSELKINSCSKIVYYSHDLLRLEEFANTLREKNFKGISMFYSANDLFEITNVDASKYNAIKNISLCECIGVDSILAFGDN
GNDYEMLKNVGKGILMKNAHDRVKNSLPNNELTKFCNDNDGVAKFLIEFFDLDIN

Sequences:

>Translated_295_residues
MPRKFDVISFILKEDIAMNANYEKYKMLVFDLDGTLLNSKHEITPLTLKVLLRLRDDFHIIIATGRRLYEIRDILLQLQD
LRINEGYIVTANGSEVFLNNDLLLRCSIDYGIVREIFKVDREGIDINLYDLHDWYSDREIRSPIMNHFIQNLGIKPIITD
LSELKINSCSKIVYYSHDLLRLEEFANTLREKNFKGISMFYSANDLFEITNVDASKYNAIKNISLCECIGVDSILAFGDN
GNDYEMLKNVGKGILMKNAHDRVKNSLPNNELTKFCNDNDGVAKFLIEFFDLDIN
>Mature_294_residues
PRKFDVISFILKEDIAMNANYEKYKMLVFDLDGTLLNSKHEITPLTLKVLLRLRDDFHIIIATGRRLYEIRDILLQLQDL
RINEGYIVTANGSEVFLNNDLLLRCSIDYGIVREIFKVDREGIDINLYDLHDWYSDREIRSPIMNHFIQNLGIKPIITDL
SELKINSCSKIVYYSHDLLRLEEFANTLREKNFKGISMFYSANDLFEITNVDASKYNAIKNISLCECIGVDSILAFGDNG
NDYEMLKNVGKGILMKNAHDRVKNSLPNNELTKFCNDNDGVAKFLIEFFDLDIN

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI87081741, Length=272, Percent_Identity=28.3088235294118, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI48994981, Length=275, Percent_Identity=28.3636363636364, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 34157; Mature: 34026

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKFDVISFILKEDIAMNANYEKYKMLVFDLDGTLLNSKHEITPLTLKVLLRLRDDFHI
CCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEECCCCCCCHHHHHHHHHHCCCCEE
IIATGRRLYEIRDILLQLQDLRINEGYIVTANGSEVFLNNDLLLRCSIDYGIVREIFKVD
EEECCCHHHHHHHHHHHHHHCEECCCEEEEECCCEEEEECCEEEEEECCHHHHHHHHHHC
REGIDINLYDLHDWYSDREIRSPIMNHFIQNLGIKPIITDLSELKINSCSKIVYYSHDLL
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECHHHH
RLEEFANTLREKNFKGISMFYSANDLFEITNVDASKYNAIKNISLCECIGVDSILAFGDN
HHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCHHHHHHHCCCCHHHHHCCCCEEEECCC
GNDYEMLKNVGKGILMKNAHDRVKNSLPNNELTKFCNDNDGVAKFLIEFFDLDIN
CCHHHHHHHCCCCEEECCHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PRKFDVISFILKEDIAMNANYEKYKMLVFDLDGTLLNSKHEITPLTLKVLLRLRDDFHI
CCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEECCCCCCCHHHHHHHHHHCCCCEE
IIATGRRLYEIRDILLQLQDLRINEGYIVTANGSEVFLNNDLLLRCSIDYGIVREIFKVD
EEECCCHHHHHHHHHHHHHHCEECCCEEEEECCCEEEEECCEEEEEECCHHHHHHHHHHC
REGIDINLYDLHDWYSDREIRSPIMNHFIQNLGIKPIITDLSELKINSCSKIVYYSHDLL
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECHHHH
RLEEFANTLREKNFKGISMFYSANDLFEITNVDASKYNAIKNISLCECIGVDSILAFGDN
HHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCHHHHHHHCCCCHHHHHCCCCEEEECCC
GNDYEMLKNVGKGILMKNAHDRVKNSLPNNELTKFCNDNDGVAKFLIEFFDLDIN
CCHHHHHHHCCCCEEECCHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]