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The map label for this gene is yebA [C]

Identifier: 203284166

GI number: 203284166

Start: 264618

End: 265643

Strand: Reverse

Name: yebA [C]

Synonym: BDU_247

Alternate gene names: 203284166

Gene position: 265643-264618 (Counterclockwise)

Preceding gene: 203284173

Following gene: 203284165

Centisome position: 28.51

GC content: 29.82

Gene sequence:

>1026_bases
ATGAAAGATAAAAGAGGTTTTAGAATTTTATCATTTTTGAAAAAATTAGATAGGATCTTTTTTACAATTTTTAGTTCTTT
TTTTAAATTTTTGAGTCATATTTGTTCTTTTTTTAAACAAAATATTAGCTTTATGATTATTCCTCATGTTAGAGGGAATG
TCAAGAATATAAAGATTTCTTTTTTTACTTTATTTTTATTTTGTGTATTTTTCTTTGTAATTTTTATAGGATTTATTTTT
CTTGCTGTTAATTATGTTACTCTTAAATCTATTGTTAATTCTACTGAAAAAAATTATGCACTTGCAGAGTCTGAGATTGA
GGATTTTAGAAATACAGTTGTGGAGATTAATTCTGTTTCTAATAATTTTTCTAAAGTTTTAGATGAACTTAGTTCTTCTT
TAAGAATCAAGGAGAATAATGTTGGTTTGAATAGAAGTAAATTAGATGGAGATCTTGCAGATTTTATTGATTTACAAATG
TTAGAGGCCAATTCGTTTAAGGAATTAAATGATCTTAAGAATGTTAAGAACACGATTGAAGGGTCAATTTCGCCTCTTAA
GAATATAGTTAGATTGCTTCATTCTCAAAATAAATTATTGAATGATATTCCTTCGCTTTGGCCTATTATTAAAGGAAATG
GTATCGTCTCTTTGCATTTTGGTCCAGCTATTGAGCCTTTTACTAGACAGTGGTATATTCATAAGGGAATAGATATTGCA
GGGGTTAGGATTGGAACAGCCATTGTTGCGGCGGCTGATGGTGAGGTTGTAAGAGCTAGTTATCAAGTGACAGGTTATGG
TAATTTTGTCCAAATTAAACATAAATATGGACTTTCAACGCTTTATGCACACATGTCTAGATTGAATATTTCAAAGGGTT
CTTATGTGAGAAAGGGTCAAGTTATTGGTTTTTTGGGGCAAACAGGATATTCTACAGGTCCACATCTTCATTATGAAGTT
CGCATAGGATCTCAAGTTGTAAATCCTGATATGTATTTAAATTTGGCTACGGGGGCTTCTAAATAG

Upstream 100 bases:

>100_bases
TTTTAATTTGATGGTATTATTTAATGTTCAACATTAAGTTAAATCTTATAAGTTTTTTATGTTTAAATTTTATTGATTGA
TGTTGTGGTGAGGGTTTGTA

Downstream 100 bases:

>100_bases
ATGTTAAATTTATTGGTTATTAAAAGAGATAGAAAGGTTGGATCGTCTTTATTGAGTGATGAAGTTAAGACAATTGTTGG
GAAAGGCGATTTTTTTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MKDKRGFRILSFLKKLDRIFFTIFSSFFKFLSHICSFFKQNISFMIIPHVRGNVKNIKISFFTLFLFCVFFFVIFIGFIF
LAVNYVTLKSIVNSTEKNYALAESEIEDFRNTVVEINSVSNNFSKVLDELSSSLRIKENNVGLNRSKLDGDLADFIDLQM
LEANSFKELNDLKNVKNTIEGSISPLKNIVRLLHSQNKLLNDIPSLWPIIKGNGIVSLHFGPAIEPFTRQWYIHKGIDIA
GVRIGTAIVAAADGEVVRASYQVTGYGNFVQIKHKYGLSTLYAHMSRLNISKGSYVRKGQVIGFLGQTGYSTGPHLHYEV
RIGSQVVNPDMYLNLATGASK

Sequences:

>Translated_341_residues
MKDKRGFRILSFLKKLDRIFFTIFSSFFKFLSHICSFFKQNISFMIIPHVRGNVKNIKISFFTLFLFCVFFFVIFIGFIF
LAVNYVTLKSIVNSTEKNYALAESEIEDFRNTVVEINSVSNNFSKVLDELSSSLRIKENNVGLNRSKLDGDLADFIDLQM
LEANSFKELNDLKNVKNTIEGSISPLKNIVRLLHSQNKLLNDIPSLWPIIKGNGIVSLHFGPAIEPFTRQWYIHKGIDIA
GVRIGTAIVAAADGEVVRASYQVTGYGNFVQIKHKYGLSTLYAHMSRLNISKGSYVRKGQVIGFLGQTGYSTGPHLHYEV
RIGSQVVNPDMYLNLATGASK
>Mature_341_residues
MKDKRGFRILSFLKKLDRIFFTIFSSFFKFLSHICSFFKQNISFMIIPHVRGNVKNIKISFFTLFLFCVFFFVIFIGFIF
LAVNYVTLKSIVNSTEKNYALAESEIEDFRNTVVEINSVSNNFSKVLDELSSSLRIKENNVGLNRSKLDGDLADFIDLQM
LEANSFKELNDLKNVKNTIEGSISPLKNIVRLLHSQNKLLNDIPSLWPIIKGNGIVSLHFGPAIEPFTRQWYIHKGIDIA
GVRIGTAIVAAADGEVVRASYQVTGYGNFVQIKHKYGLSTLYAHMSRLNISKGSYVRKGQVIGFLGQTGYSTGPHLHYEV
RIGSQVVNPDMYLNLATGASK

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=115, Percent_Identity=40, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789099, Length=113, Percent_Identity=42.4778761061947, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI87082174, Length=129, Percent_Identity=34.8837209302326, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87082297, Length=127, Percent_Identity=35.4330708661417, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 38507; Mature: 38507

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKRGFRILSFLKKLDRIFFTIFSSFFKFLSHICSFFKQNISFMIIPHVRGNVKNIKIS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEHH
FFTLFLFCVFFFVIFIGFIFLAVNYVTLKSIVNSTEKNYALAESEIEDFRNTVVEINSVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEHHHC
NNFSKVLDELSSSLRIKENNVGLNRSKLDGDLADFIDLQMLEANSFKELNDLKNVKNTIE
CHHHHHHHHHHHHCEEECCCCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GSISPLKNIVRLLHSQNKLLNDIPSLWPIIKGNGIVSLHFGPAIEPFTRQWYIHKGIDIA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCCCCCCHHHEEEEECCCEEE
GVRIGTAIVAAADGEVVRASYQVTGYGNFVQIKHKYGLSTLYAHMSRLNISKGSYVRKGQ
EEEEEEEEEEECCCCEEEEEEEEECCCCEEEEEHHHCHHHHHHHHHHCCCCCCCCEECCC
VIGFLGQTGYSTGPHLHYEVRIGSQVVNPDMYLNLATGASK
EEEEECCCCCCCCCEEEEEEEECCEEECCCEEEEECCCCCC
>Mature Secondary Structure
MKDKRGFRILSFLKKLDRIFFTIFSSFFKFLSHICSFFKQNISFMIIPHVRGNVKNIKIS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEHH
FFTLFLFCVFFFVIFIGFIFLAVNYVTLKSIVNSTEKNYALAESEIEDFRNTVVEINSVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEHHHC
NNFSKVLDELSSSLRIKENNVGLNRSKLDGDLADFIDLQMLEANSFKELNDLKNVKNTIE
CHHHHHHHHHHHHCEEECCCCCCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GSISPLKNIVRLLHSQNKLLNDIPSLWPIIKGNGIVSLHFGPAIEPFTRQWYIHKGIDIA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCCCCCCHHHEEEEECCCEEE
GVRIGTAIVAAADGEVVRASYQVTGYGNFVQIKHKYGLSTLYAHMSRLNISKGSYVRKGQ
EEEEEEEEEEECCCCEEEEEEEEECCCCEEEEEHHHCHHHHHHHHHHCCCCCCCCEECCC
VIGFLGQTGYSTGPHLHYEVRIGSQVVNPDMYLNLATGASK
EEEEECCCCCCCCCEEEEEEEECCEEECCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]