| Definition | Borrelia duttonii Ly, complete genome. |
|---|---|
| Accession | NC_011229 |
| Length | 931,674 |
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The map label for this gene is 203284155
Identifier: 203284155
GI number: 203284155
Start: 251151
End: 253214
Strand: Reverse
Name: 203284155
Synonym: BDU_236
Alternate gene names: NA
Gene position: 253214-251151 (Counterclockwise)
Preceding gene: 203284157
Following gene: 203284154
Centisome position: 27.18
GC content: 28.15
Gene sequence:
>2064_bases ATGTTTCGTGTAAAAATATTAAATTTATATAGTACTTGTTTTAGTATTAAAAAAATAGCTTTGATGTTTAATATAGCCAT TTTTTTAATAAATGCATTTGTTTTAAATGCTCAAGGTATTGTTACTAACAAGGATGCTCAAGAAGAATTTAAATGGGCAC TTAATTCTTATAATAATGGTCTTTATGATGATGCTTTGTTGTCTTTTAAGAGAGTTTTAAGCTTTGATCCAAGTAATCTT GATTATCATTTTTGGATAGGAAATGTTTATTATAGATTGGGGCATGTTGAGGAAGCTTTGATGGAATGGCGAAATTTGCA ATCTCAAGGGTATAAATCGGCTTATCTTAGGCAGTTGATATCTATAATTGAACAAAGAAGAGGTATATCCTTAAATAATG AATTTAAAAATATTGAAAAATTTGTTCAAGTTGCGCTTCTTGATAATTCCATTTATAAACGACCAAATGGATATCAGATT ACATCTCTAAAGGCCGATCAATATGGTGGTTATTATGCTGCTAATTTTGTAGGAAATGAAATTTTACATTTTGATGCTAA TAATAATATTCATGTTTTAGTTAAGGATGGAATTACTTCTATAAAGTCACCTTATGATGTTATTGAGCTTGATAAACTTT TATATGTGACACTTTATTCAAATGATGAGATTGGTATATATGATAAGACTTTTGGCATTAAAAAAGGTTCAATTGGAAAG AAAGGTACTGAGGATGGTGAGTTACTTGCTCCTCAATATATAACAGTTGATGAGAGAGATTATATTTATGTTAGTGAATG GGGAAATAAGCGAATCAGCAAATTTGATGCTAAGGGTAGTTTTGTTTTGAATTTTGGCATGAAAACGGTTGGATATGCAG GGCTTTTAGGTCCAACAGGTGTTACGTATTTGAATGGAAATATTTATGTTGCTGATGCTCCTAGAAATTCTATTGAAGTA TTTGATACTAGTGGTAATCATTTGTATTCTATTTCAACTTCTTTTGAAGGGATAGAAGGTCTTAGCAGTGATTTTGCAAG TAATAGCATTATTATATCTTCAAAATATGGTGTTTATAAATATAGTGTTTCAAGTAAAACTTTTGTTAAGCTTTTAAAAG CAGATAAGATAGATTCTAAAATTTCATCTTCAATTATTGATGTTAATAATCAAATGGTTGTATCAGATTTTGATAATGCT CATATTGCGATTTATAAAAGTGATGTTAGTGTTTATGATAGTTTAAATGTTGATGTTCGTAGAGTAATTAGGGCTGGAGG TTCTAAAATTTATGTGGAGCTTAATATTAGCAATAGAAATGGATTACCAATTGTGGGTTTAAAGAGTGAAAATTTTGCGG TTGCTAATGAGAGATATTACATTGTAAATCCAAAAATTGCTTATGATATTAATACTTCTAATGATATGAATATTGCAATT GTTTTTGATAAATCTTTTTCTATGAAAAATTACGAGTCAGAACAAATTATGAGTGTAAATACTCTTATAAAATCTAGAAA AAATAAAAAGTTTAGTTTTATAAATGCAACTAATTTACCTTTGGTAGATAATATCGATAGTTTATTAAGTATGATTCATA AAACAAATTCTCTTGGTGTTTATGATTTAAATGATGTAAAGACGGATGTTAGTCTTAAACTTGCAGGTTCTGAACTTATG TCAAAGAGTGCAAGAAGGGCCGTTATTTATTTTAGTGATGGATCTTTGAGTCATTCTGCTTTTAGTAGGTATTCTGTGGA TACTATTTTAAGCTATTATAAAAATAATGATATTAGATTTTATTTAATATTGTTTGGAAATAGTCCTATTGAGTCTAAAT TGCAGTATTTAGTAAATGAAACTGGTGGTGCTATTATTCCTTTTTCTTCTTATGAGGGTGTATCAAAAGTTTATGATTTA ATGATGAAACAGAAAACAGGGACTTATTTGCTTGAATATGATTATCCAGGCCCTCAAGAACCTAATGGATATTATAATTT ATCTGTTGAAGTAAATTTCAATCAACAAATAGGTAGAGGAGAATTTGCATATTTAATTAATTAA
Upstream 100 bases:
>100_bases TTCTTTTCCTTTTTTGTTTTGTTTTTGTATATAAAAATATATTATATATTCAAGAATACAGATATTAATATACAATATTG CATAGTATAATATATATAAT
Downstream 100 bases:
>100_bases ATTTTACTTTATGGAGTTTTATTTATGGCACTTAATGTGGGAATAGTGGGATTGCCCAATGTTGGGAAATCTACCTTATT TTCGTCCTTAACAGCATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Tripartite Motif-Containing Protein; Tetratricopeptide Repeat Family Protein; Tetratricopeptide Repeat-Containing Protein
Number of amino acids: Translated: 687; Mature: 687
Protein sequence:
>687_residues MFRVKILNLYSTCFSIKKIALMFNIAIFLINAFVLNAQGIVTNKDAQEEFKWALNSYNNGLYDDALLSFKRVLSFDPSNL DYHFWIGNVYYRLGHVEEALMEWRNLQSQGYKSAYLRQLISIIEQRRGISLNNEFKNIEKFVQVALLDNSIYKRPNGYQI TSLKADQYGGYYAANFVGNEILHFDANNNIHVLVKDGITSIKSPYDVIELDKLLYVTLYSNDEIGIYDKTFGIKKGSIGK KGTEDGELLAPQYITVDERDYIYVSEWGNKRISKFDAKGSFVLNFGMKTVGYAGLLGPTGVTYLNGNIYVADAPRNSIEV FDTSGNHLYSISTSFEGIEGLSSDFASNSIIISSKYGVYKYSVSSKTFVKLLKADKIDSKISSSIIDVNNQMVVSDFDNA HIAIYKSDVSVYDSLNVDVRRVIRAGGSKIYVELNISNRNGLPIVGLKSENFAVANERYYIVNPKIAYDINTSNDMNIAI VFDKSFSMKNYESEQIMSVNTLIKSRKNKKFSFINATNLPLVDNIDSLLSMIHKTNSLGVYDLNDVKTDVSLKLAGSELM SKSARRAVIYFSDGSLSHSAFSRYSVDTILSYYKNNDIRFYLILFGNSPIESKLQYLVNETGGAIIPFSSYEGVSKVYDL MMKQKTGTYLLEYDYPGPQEPNGYYNLSVEVNFNQQIGRGEFAYLIN
Sequences:
>Translated_687_residues MFRVKILNLYSTCFSIKKIALMFNIAIFLINAFVLNAQGIVTNKDAQEEFKWALNSYNNGLYDDALLSFKRVLSFDPSNL DYHFWIGNVYYRLGHVEEALMEWRNLQSQGYKSAYLRQLISIIEQRRGISLNNEFKNIEKFVQVALLDNSIYKRPNGYQI TSLKADQYGGYYAANFVGNEILHFDANNNIHVLVKDGITSIKSPYDVIELDKLLYVTLYSNDEIGIYDKTFGIKKGSIGK KGTEDGELLAPQYITVDERDYIYVSEWGNKRISKFDAKGSFVLNFGMKTVGYAGLLGPTGVTYLNGNIYVADAPRNSIEV FDTSGNHLYSISTSFEGIEGLSSDFASNSIIISSKYGVYKYSVSSKTFVKLLKADKIDSKISSSIIDVNNQMVVSDFDNA HIAIYKSDVSVYDSLNVDVRRVIRAGGSKIYVELNISNRNGLPIVGLKSENFAVANERYYIVNPKIAYDINTSNDMNIAI VFDKSFSMKNYESEQIMSVNTLIKSRKNKKFSFINATNLPLVDNIDSLLSMIHKTNSLGVYDLNDVKTDVSLKLAGSELM SKSARRAVIYFSDGSLSHSAFSRYSVDTILSYYKNNDIRFYLILFGNSPIESKLQYLVNETGGAIIPFSSYEGVSKVYDL MMKQKTGTYLLEYDYPGPQEPNGYYNLSVEVNFNQQIGRGEFAYLIN >Mature_687_residues MFRVKILNLYSTCFSIKKIALMFNIAIFLINAFVLNAQGIVTNKDAQEEFKWALNSYNNGLYDDALLSFKRVLSFDPSNL DYHFWIGNVYYRLGHVEEALMEWRNLQSQGYKSAYLRQLISIIEQRRGISLNNEFKNIEKFVQVALLDNSIYKRPNGYQI TSLKADQYGGYYAANFVGNEILHFDANNNIHVLVKDGITSIKSPYDVIELDKLLYVTLYSNDEIGIYDKTFGIKKGSIGK KGTEDGELLAPQYITVDERDYIYVSEWGNKRISKFDAKGSFVLNFGMKTVGYAGLLGPTGVTYLNGNIYVADAPRNSIEV FDTSGNHLYSISTSFEGIEGLSSDFASNSIIISSKYGVYKYSVSSKTFVKLLKADKIDSKISSSIIDVNNQMVVSDFDNA HIAIYKSDVSVYDSLNVDVRRVIRAGGSKIYVELNISNRNGLPIVGLKSENFAVANERYYIVNPKIAYDINTSNDMNIAI VFDKSFSMKNYESEQIMSVNTLIKSRKNKKFSFINATNLPLVDNIDSLLSMIHKTNSLGVYDLNDVKTDVSLKLAGSELM SKSARRAVIYFSDGSLSHSAFSRYSVDTILSYYKNNDIRFYLILFGNSPIESKLQYLVNETGGAIIPFSSYEGVSKVYDL MMKQKTGTYLLEYDYPGPQEPNGYYNLSVEVNFNQQIGRGEFAYLIN
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77599; Mature: 77599
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS51125 NHL ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRVKILNLYSTCFSIKKIALMFNIAIFLINAFVLNAQGIVTNKDAQEEFKWALNSYNNG CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCHHHHHHHHHHHCCCC LYDDALLSFKRVLSFDPSNLDYHFWIGNVYYRLGHVEEALMEWRNLQSQGYKSAYLRQLI CHHHHHHHHHHHHCCCCCCCEEEEEECEEHEEHHHHHHHHHHHHHHHHCCHHHHHHHHHH SIIEQRRGISLNNEFKNIEKFVQVALLDNSIYKRPNGYQITSLKADQYGGYYAANFVGNE HHHHHHCCCCCCCHHHHHHHHHHHHEECCHHHCCCCCEEEEEEECCCCCCEEEEEECCCE ILHFDANNNIHVLVKDGITSIKSPYDVIELDKLLYVTLYSNDEIGIYDKTFGIKKGSIGK EEEEECCCCEEEEEECCCCHHCCCCCCEEECEEEEEEEECCCCCEEEECCCCCCCCCCCC KGTEDGELLAPQYITVDERDYIYVSEWGNKRISKFDAKGSFVLNFGMKTVGYAGLLGPTG CCCCCCCEECCEEEEECCCCEEEEECCCCCCCEEECCCCCEEEEECCHHHCCCCCCCCCC VTYLNGNIYVADAPRNSIEVFDTSGNHLYSISTSFEGIEGLSSDFASNSIIISSKYGVYK EEEECCEEEEEECCCCCEEEEECCCCEEEEEECCCCCCHHHHHHCCCCEEEEEECCCEEE YSVSSKTFVKLLKADKIDSKISSSIIDVNNQMVVSDFDNAHIAIYKSDVSVYDSLNVDVR EECCCHHHHHHHHHCCHHHHHHHHEEECCCEEEEEECCCCEEEEEECCCEEEECCCHHHH RVIRAGGSKIYVELNISNRNGLPIVGLKSENFAVANERYYIVNPKIAYDINTSNDMNIAI HHHHCCCCEEEEEEEECCCCCCEEEEECCCCEEEECCEEEEECCEEEEEECCCCCCEEEE VFDKSFSMKNYESEQIMSVNTLIKSRKNKKFSFINATNLPLVDNIDSLLSMIHKTNSLGV EEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCE YDLNDVKTDVSLKLAGSELMSKSARRAVIYFSDGSLSHSAFSRYSVDTILSYYKNNDIRF EECCCCCCCEEEEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEE YLILFGNSPIESKLQYLVNETGGAIIPFSSYEGVSKVYDLMMKQKTGTYLLEYDYPGPQE EEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCC PNGYYNLSVEVNFNQQIGRGEFAYLIN CCCEEEEEEEEEECCCCCCCCEEEEEC >Mature Secondary Structure MFRVKILNLYSTCFSIKKIALMFNIAIFLINAFVLNAQGIVTNKDAQEEFKWALNSYNNG CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEECCCHHHHHHHHHHHCCCC LYDDALLSFKRVLSFDPSNLDYHFWIGNVYYRLGHVEEALMEWRNLQSQGYKSAYLRQLI CHHHHHHHHHHHHCCCCCCCEEEEEECEEHEEHHHHHHHHHHHHHHHHCCHHHHHHHHHH SIIEQRRGISLNNEFKNIEKFVQVALLDNSIYKRPNGYQITSLKADQYGGYYAANFVGNE HHHHHHCCCCCCCHHHHHHHHHHHHEECCHHHCCCCCEEEEEEECCCCCCEEEEEECCCE ILHFDANNNIHVLVKDGITSIKSPYDVIELDKLLYVTLYSNDEIGIYDKTFGIKKGSIGK EEEEECCCCEEEEEECCCCHHCCCCCCEEECEEEEEEEECCCCCEEEECCCCCCCCCCCC KGTEDGELLAPQYITVDERDYIYVSEWGNKRISKFDAKGSFVLNFGMKTVGYAGLLGPTG CCCCCCCEECCEEEEECCCCEEEEECCCCCCCEEECCCCCEEEEECCHHHCCCCCCCCCC VTYLNGNIYVADAPRNSIEVFDTSGNHLYSISTSFEGIEGLSSDFASNSIIISSKYGVYK EEEECCEEEEEECCCCCEEEEECCCCEEEEEECCCCCCHHHHHHCCCCEEEEEECCCEEE YSVSSKTFVKLLKADKIDSKISSSIIDVNNQMVVSDFDNAHIAIYKSDVSVYDSLNVDVR EECCCHHHHHHHHHCCHHHHHHHHEEECCCEEEEEECCCCEEEEEECCCEEEECCCHHHH RVIRAGGSKIYVELNISNRNGLPIVGLKSENFAVANERYYIVNPKIAYDINTSNDMNIAI HHHHCCCCEEEEEEEECCCCCCEEEEECCCCEEEECCEEEEECCEEEEEECCCCCCEEEE VFDKSFSMKNYESEQIMSVNTLIKSRKNKKFSFINATNLPLVDNIDSLLSMIHKTNSLGV EEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCE YDLNDVKTDVSLKLAGSELMSKSARRAVIYFSDGSLSHSAFSRYSVDTILSYYKNNDIRF EECCCCCCCEEEEECCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEE YLILFGNSPIESKLQYLVNETGGAIIPFSSYEGVSKVYDLMMKQKTGTYLLEYDYPGPQE EEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCC PNGYYNLSVEVNFNQQIGRGEFAYLIN CCCEEEEEEEEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA